RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 CITED2Q99967 270 aaPredicted RBP5.86□□□□□ -1.47
SMC6-209ENST00000489535 RHPN1-AS1Q9BWJ2 59 aa5.86□□□□□ -1.47
SMC6-209ENST00000489535 ZNF331Q9NQX6 463 aaPredicted RBP5.86□□□□□ -1.47
SMC6-209ENST00000489535 SMPXQ9UHP9 88 aa5.86□□□□□ -1.47
SMC6-209ENST00000489535 TSSC4Q9Y5U2 329 aaPredicted RBP5.86□□□□□ -1.47
SMC6-209ENST00000489535 SELENOKQ9Y6D0 94 aa5.86□□□□□ -1.47
SMC6-209ENST00000489535 TMEM213A2RRL7 107 aa5.85□□□□□ -1.47
SMC6-209ENST00000489535 DIRC3C9JPN6 131 aa5.85□□□□□ -1.47
SMC6-209ENST00000489535 K7EQM0 130 aa5.85□□□□□ -1.47
SMC6-209ENST00000489535 M0R3E3 92 aa5.85□□□□□ -1.47
SMC6-209ENST00000489535 DNASE2O00115 360 aaPredicted RBP5.85□□□□□ -1.47
SMC6-209ENST00000489535 ISLRO14498 428 aa5.85□□□□□ -1.47
SMC6-209ENST00000489535 S100A9P06702 114 aaKnown RBP5.85□□□□□ -1.47
SMC6-209ENST00000489535 PRB4P10163 310 aaPredicted RBP5.85□□□□□ -1.47
SMC6-209ENST00000489535 BMI1P35226 326 aa5.85□□□□□ -1.47
SMC6-209ENST00000489535 CSN1S1P47710 185 aa5.85□□□□□ -1.47
SMC6-209ENST00000489535 MEOX2P50222 304 aa5.85□□□□□ -1.47
SMC6-209ENST00000489535 KLF5Q13887 457 aaPredicted RBP5.85□□□□□ -1.47
SMC6-209ENST00000489535 TMEM183BQ1AE95 376 aa5.85□□□□□ -1.47
SMC6-209ENST00000489535 TMEM88Q6PEY1 159 aa5.85□□□□□ -1.47
SMC6-209ENST00000489535 LINC01551Q86U37 167 aa5.85□□□□□ -1.47
SMC6-209ENST00000489535 CBLN2Q8IUK8 224 aa5.85□□□□□ -1.47
SMC6-209ENST00000489535 OCC1Q8TAD7 63 aa5.85□□□□□ -1.47
SMC6-209ENST00000489535 FMC1Q96HJ9 113 aa5.85□□□□□ -1.47
SMC6-209ENST00000489535 IGF2BP2-AS1Q96M15 143 aa5.85□□□□□ -1.47
SMC6-209ENST00000489535 LY96Q9Y6Y9 160 aa5.85□□□□□ -1.47
SMC6-209ENST00000489535 F8P00451 2351 aa5.85□□□□□ -1.47
SMC6-209ENST00000489535 IGKV3-7A0A075B6H7 116 aa5.84□□□□□ -1.47
SMC6-209ENST00000489535 A0A087WWC5 75 aa5.84□□□□□ -1.47
SMC6-209ENST00000489535 C2orf70A6NJV1 201 aa5.84□□□□□ -1.47
SMC6-209ENST00000489535 ZNF705FA8MVS1 300 aaPredicted RBP5.84□□□□□ -1.47
SMC6-209ENST00000489535 M0QZ24 198 aa5.84□□□□□ -1.47
SMC6-209ENST00000489535 MT-ND4LP03901 98 aa5.84□□□□□ -1.47
SMC6-209ENST00000489535 MGST1P10620 155 aaKnown RBP5.84□□□□□ -1.47
SMC6-209ENST00000489535 KRTAP5-9P26371 169 aa5.84□□□□□ -1.47
SMC6-209ENST00000489535 RNF212Q495C1 297 aa5.84□□□□□ -1.47
SMC6-209ENST00000489535 TCF24Q7RTU0 167 aa5.84□□□□□ -1.47
SMC6-209ENST00000489535 Q86TA4 180 aa5.84□□□□□ -1.47
SMC6-209ENST00000489535 RNF182Q8N6D2 247 aa5.84□□□□□ -1.47
SMC6-209ENST00000489535 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.84□□□□□ -1.47
SMC6-209ENST00000489535 TMEM75Q8N9X5 138 aa5.84□□□□□ -1.47
SMC6-209ENST00000489535 NHLRC2Q8NBF2 726 aa5.84□□□□□ -1.47
SMC6-209ENST00000489535 DLX4Q92988 240 aaPredicted RBP5.84□□□□□ -1.47
SMC6-209ENST00000489535 ISOC2Q96AB3 205 aa5.84□□□□□ -1.47
SMC6-209ENST00000489535 RAX2Q96IS3 184 aa5.84□□□□□ -1.47
SMC6-209ENST00000489535 PEMTQ9UBM1 199 aa5.84□□□□□ -1.47
SMC6-209ENST00000489535 PRELID1Q9Y255 219 aa5.84□□□□□ -1.47
SMC6-209ENST00000489535 SETXQ7Z333 2677 aaKnown RBP5.84□□□□□ -1.47
SMC6-209ENST00000489535 NOTCH2Q04721 2471 aa5.83□□□□□ -1.48
SMC6-209ENST00000489535 IGKV2-40A0A087WW87 121 aaPredicted RBP5.83□□□□□ -1.48
SMC6-209ENST00000489535 TRAV8-1A0A0A6YYK1 113 aa5.83□□□□□ -1.48
SMC6-209ENST00000489535 TRAV8-2A0A0B4J237 113 aa5.83□□□□□ -1.48
SMC6-209ENST00000489535 A0A1B0GUS0 222 aa5.83□□□□□ -1.48
SMC6-209ENST00000489535 SERTM2A0A1B0GWG4 89 aa5.83□□□□□ -1.48
SMC6-209ENST00000489535 K7EN84 100 aa5.83□□□□□ -1.48
SMC6-209ENST00000489535 TSPAN4O14817 238 aa5.83□□□□□ -1.48
SMC6-209ENST00000489535 IGKV2D-40P01614 121 aaPredicted RBP5.83□□□□□ -1.48
SMC6-209ENST00000489535 IGLV2-8P01709 118 aa5.83□□□□□ -1.48
SMC6-209ENST00000489535 FOLR2P14207 255 aa5.83□□□□□ -1.48
SMC6-209ENST00000489535 CBLN1P23435 193 aa5.83□□□□□ -1.48
SMC6-209ENST00000489535 FLI1Q01543 452 aaPredicted RBP5.83□□□□□ -1.48
SMC6-209ENST00000489535 OR5I1Q13606 314 aa5.83□□□□□ -1.48
SMC6-209ENST00000489535 PSG3Q16557 428 aa5.83□□□□□ -1.48
SMC6-209ENST00000489535 NSUN5P1Q3KNT7 163 aa5.83□□□□□ -1.48
SMC6-209ENST00000489535 PRNTQ86SH4 94 aa5.83□□□□□ -1.48
SMC6-209ENST00000489535 BAGE2Q86Y30 109 aa5.83□□□□□ -1.48
SMC6-209ENST00000489535 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.83□□□□□ -1.48
SMC6-209ENST00000489535 CTDSP1Q9GZU7 261 aa5.83□□□□□ -1.48
SMC6-209ENST00000489535 NRN1Q9NPD7 142 aa5.83□□□□□ -1.48
SMC6-209ENST00000489535 SMCO4Q9NRQ5 59 aa5.83□□□□□ -1.48
SMC6-209ENST00000489535 KLF12Q9Y4X4 402 aa5.83□□□□□ -1.48
SMC6-209ENST00000489535 TRBV6-1A0A0K0K1D8 114 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 PRAC2D3DTV9 90 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 H7BYZ3 331 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 CCL24O00175 119 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 SOCS3O14543 225 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 PPP1R2P9O14990 202 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 GCGP01275 180 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 LTAP01374 205 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 IGLV2-11P01706 119 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 KRTAP10-3P60369 221 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 FHL3Q13643 280 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 LCN12Q6JVE5 192 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 GBGT1Q8N5D6 347 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 ARL6IP6Q8N6S5 226 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 ZNF738Q8NE65 137 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 OR10G8Q8NGN5 311 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 OR9G4Q8NGQ1 327 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 MRPL53Q96EL3 112 aaKnown RBP5.82□□□□□ -1.48
SMC6-209ENST00000489535 SFRP2Q96HF1 295 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 ASCL2Q99929 193 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 CLEC5AQ9NY25 188 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 MLXQ9UH92 298 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 PSG8Q9UQ74 426 aa5.82□□□□□ -1.48
SMC6-209ENST00000489535 OVOL1O14753 267 aa5.81□□□□□ -1.48
SMC6-209ENST00000489535 CSN3P07498 182 aa5.81□□□□□ -1.48
SMC6-209ENST00000489535 TFPI2P48307 235 aa5.81□□□□□ -1.48
SMC6-209ENST00000489535 ERVFC1-1P60608 527 aa5.81□□□□□ -1.48
SMC6-209ENST00000489535 ERCC8Q13216 396 aa5.81□□□□□ -1.48
SMC6-209ENST00000489535 IBA57Q5T440 356 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms