RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 NOL4LQ96MY1 436 aaPredicted RBP6.55□□□□□ -1.36
VTI1A-207ENST00000489357 MS4A10Q96PG2 267 aa6.55□□□□□ -1.36
VTI1A-207ENST00000489357 PRDM13Q9H4Q3 707 aa6.55□□□□□ -1.36
VTI1A-207ENST00000489357 YAE1D1Q9NRH1 226 aa6.55□□□□□ -1.36
VTI1A-207ENST00000489357 PSG8Q9UQ74 426 aa6.55□□□□□ -1.36
VTI1A-207ENST00000489357 TRAV40A0A0B4J280 105 aa6.54□□□□□ -1.36
VTI1A-207ENST00000489357 TMEM89A2RUT3 159 aa6.54□□□□□ -1.36
VTI1A-207ENST00000489357 A6NDX4 124 aa6.54□□□□□ -1.36
VTI1A-207ENST00000489357 BUB3O43684 328 aa6.54□□□□□ -1.36
VTI1A-207ENST00000489357 CRLF1O75462 422 aa6.54□□□□□ -1.36
VTI1A-207ENST00000489357 BMI1P35226 326 aa6.54□□□□□ -1.36
VTI1A-207ENST00000489357 TCL1AP56279 114 aa6.54□□□□□ -1.36
VTI1A-207ENST00000489357 RAB4BP61018 213 aa6.54□□□□□ -1.36
VTI1A-207ENST00000489357 ECSCRQ19T08 205 aa6.54□□□□□ -1.36
VTI1A-207ENST00000489357 SAMD13Q5VXD3 122 aa6.54□□□□□ -1.36
VTI1A-207ENST00000489357 MRPL54Q6P161 138 aaKnown RBP6.54□□□□□ -1.36
VTI1A-207ENST00000489357 PRNTQ86SH4 94 aa6.54□□□□□ -1.36
VTI1A-207ENST00000489357 PRIMA1Q86XR5 153 aa6.54□□□□□ -1.36
VTI1A-207ENST00000489357 PIFOQ8TCI5 191 aa6.54□□□□□ -1.36
VTI1A-207ENST00000489357 BORCS7Q96B45 105 aa6.54□□□□□ -1.36
VTI1A-207ENST00000489357 KCNS1Q96KK3 526 aa6.54□□□□□ -1.36
VTI1A-207ENST00000489357 METTL26Q96S19 204 aa6.54□□□□□ -1.36
VTI1A-207ENST00000489357 NDFIP1Q9BT67 221 aa6.54□□□□□ -1.36
VTI1A-207ENST00000489357 PPP1R14DQ9NXH3 145 aa6.54□□□□□ -1.36
VTI1A-207ENST00000489357 RPH3ALQ9UNE2 315 aa6.54□□□□□ -1.36
VTI1A-207ENST00000489357 A0A0G2JLM5 398 aa6.53□□□□□ -1.36
VTI1A-207ENST00000489357 SERF1AO75920 110 aa6.53□□□□□ -1.36
VTI1A-207ENST00000489357 FSHBP01225 129 aa6.53□□□□□ -1.36
VTI1A-207ENST00000489357 CLEC3BP05452 202 aa6.53□□□□□ -1.36
VTI1A-207ENST00000489357 GPX1P07203 203 aa6.53□□□□□ -1.36
VTI1A-207ENST00000489357 PMCHP20382 165 aa6.53□□□□□ -1.36
VTI1A-207ENST00000489357 SRIP30626 198 aa6.53□□□□□ -1.36
VTI1A-207ENST00000489357 GPR183P32249 361 aa6.53□□□□□ -1.36
VTI1A-207ENST00000489357 RIGQ13278 110 aa6.53□□□□□ -1.36
VTI1A-207ENST00000489357 LBHQ53QV2 105 aaPredicted RBP6.53□□□□□ -1.36
VTI1A-207ENST00000489357 TMEM256Q8N2U0 113 aa6.53□□□□□ -1.36
VTI1A-207ENST00000489357 SIGLECL1Q8N7X8 197 aa6.53□□□□□ -1.36
VTI1A-207ENST00000489357 OR2D3Q8NGH3 330 aa6.53□□□□□ -1.36
VTI1A-207ENST00000489357 SAMD10Q9BYL1 202 aa6.53□□□□□ -1.36
VTI1A-207ENST00000489357 GNB4Q9HAV0 340 aa6.53□□□□□ -1.36
VTI1A-207ENST00000489357 TP53TG3Q9ULZ0 132 aa6.53□□□□□ -1.36
VTI1A-207ENST00000489357 COL6A5A8TX70 2615 aa6.52□□□□□ -1.37
VTI1A-207ENST00000489357 A0A1B0GUT8 65 aa6.52□□□□□ -1.37
VTI1A-207ENST00000489357 GRIFINA4D1Z8 144 aa6.52□□□□□ -1.37
VTI1A-207ENST00000489357 SH2D7A6NKC9 451 aaPredicted RBP6.52□□□□□ -1.37
VTI1A-207ENST00000489357 NDUFA4O00483 81 aa6.52□□□□□ -1.37
VTI1A-207ENST00000489357 ZNF324O75467 553 aaPredicted RBP6.52□□□□□ -1.37
VTI1A-207ENST00000489357 CA1P00915 261 aaPredicted RBP6.52□□□□□ -1.37
VTI1A-207ENST00000489357 LINC00310P59036 64 aa6.52□□□□□ -1.37
VTI1A-207ENST00000489357 SLAQ13239 276 aa6.52□□□□□ -1.37
VTI1A-207ENST00000489357 LINC00322Q6ZN03 302 aaPredicted RBP6.52□□□□□ -1.37
VTI1A-207ENST00000489357 C18orf32Q8TCD1 76 aa6.52□□□□□ -1.37
VTI1A-207ENST00000489357 GTSF1Q8WW33 167 aa6.52□□□□□ -1.37
VTI1A-207ENST00000489357 CHCHD1Q96BP2 118 aaKnown RBP6.52□□□□□ -1.37
VTI1A-207ENST00000489357 ZC2HC1AQ96GY0 325 aa6.52□□□□□ -1.37
VTI1A-207ENST00000489357 PRR25Q96S07 402 aa6.52□□□□□ -1.37
VTI1A-207ENST00000489357 ALKBH7Q9BT30 221 aaPredicted RBP6.52□□□□□ -1.37
VTI1A-207ENST00000489357 CDIP1Q9H305 208 aa6.52□□□□□ -1.37
VTI1A-207ENST00000489357 NAGKQ9UJ70 344 aa6.52□□□□□ -1.37
VTI1A-207ENST00000489357 LENEPQ9Y5L5 61 aa6.52□□□□□ -1.37
VTI1A-207ENST00000489357 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.51□□□□□ -1.37
VTI1A-207ENST00000489357 TRAV8-1A0A0A6YYK1 113 aa6.51□□□□□ -1.37
VTI1A-207ENST00000489357 A0A1W2PS18 150 aa6.51□□□□□ -1.37
VTI1A-207ENST00000489357 LINC00587B1AMM8 73 aa6.51□□□□□ -1.37
VTI1A-207ENST00000489357 G3V318 75 aa6.51□□□□□ -1.37
VTI1A-207ENST00000489357 H3BTX0 84 aa6.51□□□□□ -1.37
VTI1A-207ENST00000489357 CHEK1O14757 476 aa6.51□□□□□ -1.37
VTI1A-207ENST00000489357 APOHP02749 345 aaPredicted RBP6.51□□□□□ -1.37
VTI1A-207ENST00000489357 PPIFP30405 207 aaKnown RBP6.51□□□□□ -1.37
VTI1A-207ENST00000489357 SLC35B1P78383 322 aa6.51□□□□□ -1.37
VTI1A-207ENST00000489357 CLEC19AQ6UXS0 136 aa6.51□□□□□ -1.37
VTI1A-207ENST00000489357 ZNF493Q6ZR52 646 aa6.51□□□□□ -1.37
VTI1A-207ENST00000489357 C9orf139Q6ZV77 190 aa6.51□□□□□ -1.37
VTI1A-207ENST00000489357 MRPL52Q86TS9 123 aaKnown RBP6.51□□□□□ -1.37
VTI1A-207ENST00000489357 C17orf77Q96MU5 243 aa6.51□□□□□ -1.37
VTI1A-207ENST00000489357 ASCL2Q99929 193 aa6.51□□□□□ -1.37
VTI1A-207ENST00000489357 LOC102724200A0A096LPH7 203 aaPredicted RBP6.5□□□□□ -1.37
VTI1A-207ENST00000489357 TRBV7-9A0A0J9YWB2 115 aa6.5□□□□□ -1.37
VTI1A-207ENST00000489357 CLPSL1A2RUU4 121 aa6.5□□□□□ -1.37
VTI1A-207ENST00000489357 ZNF785A8K8V0 405 aa6.5□□□□□ -1.37
VTI1A-207ENST00000489357 SPINK4O60575 86 aa6.5□□□□□ -1.37
VTI1A-207ENST00000489357 TRGV3P03979 118 aa6.5□□□□□ -1.37
VTI1A-207ENST00000489357 OR5AL1P0C617 328 aa6.5□□□□□ -1.37
VTI1A-207ENST00000489357 DDTP30046 118 aa6.5□□□□□ -1.37
VTI1A-207ENST00000489357 CTRLP40313 264 aa6.5□□□□□ -1.37
VTI1A-207ENST00000489357 AMTP48728 403 aa6.5□□□□□ -1.37
VTI1A-207ENST00000489357 DEFA6Q01524 100 aa6.5□□□□□ -1.37
VTI1A-207ENST00000489357 SCGB2A2Q13296 93 aa6.5□□□□□ -1.37
VTI1A-207ENST00000489357 LCN12Q6JVE5 192 aa6.5□□□□□ -1.37
VTI1A-207ENST00000489357 TEX43Q6ZNM6 134 aa6.5□□□□□ -1.37
VTI1A-207ENST00000489357 IL17RELQ6ZVW7 336 aa6.5□□□□□ -1.37
VTI1A-207ENST00000489357 TCF24Q7RTU0 167 aa6.5□□□□□ -1.37
VTI1A-207ENST00000489357 SMAD5-AS1Q9Y6J3 95 aa6.5□□□□□ -1.37
VTI1A-207ENST00000489357 S4R3C0 116 aa6.5□□□□□ -1.37
VTI1A-207ENST00000489357 CUBNO60494 3623 aa6.5□□□□□ -1.37
VTI1A-207ENST00000489357 KIR2DL5BA0A0G2JN68 375 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 KIR2DL5BA0A0G2JPC4 375 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 TMEM189A5PLL7 270 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 FABP5P3A8MUU1 101 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 F2Z2F3 143 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms