RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 C5orf67F2Z3F1 127 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 MRPL33O75394 65 aaKnown RBP3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 TCL1BO95988 128 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 SAA2P0DJI9 122 aaPredicted RBP3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 PSMB2P49721 201 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 MRPS21P82921 87 aaKnown RBP3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 RBMXL3Q8N7X1 1067 aaKnown RBP3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 ODF3Q96PU9 254 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 FOXC2Q99958 501 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 SRSF8Q9BRL6 282 aaKnown RBP3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 CNFNQ9BYD5 112 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 HEATR1Q9H583 2144 aaKnown RBP3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 NDUFA4L2Q9NRX3 87 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 BRWD1Q9NSI6 2320 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 DNAH14Q0VDD8 3507 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 IGLV2-18A0A075B6J9 118 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 IGHV1-45A0A0A0MS14 117 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 TRAV8-1A0A0A6YYK1 113 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 WNT9BO14905 357 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 PRSS1P07477 247 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 LGALS1P09382 135 aaKnown RBP3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 SCGB1C2P0DMR2 95 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 CGB3P0DN86 165 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 CGB7P0DN87 165 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 CKS2P33552 79 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 LEPP41159 167 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 CRIP1P50238 77 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 SSR4P51571 173 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 SUB1P53999 127 aaKnown RBP eCLIP3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 FXYD7P58549 80 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 SUMO2P61956 95 aaKnown RBP3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 ANXA2RQ3ZCQ2 193 aa3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 Q71RC1 249 aaPredicted RBP3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 MRPL35Q9NZE8 188 aaKnown RBP3.69□□□□□ -1.82
CDC42BPA-213ENST00000488131 USP34Q70CQ2 3546 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 SZT2Q5T011 3432 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 IGHV3OR15-7A0A075B7D8 119 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 TRAV40A0A0B4J280 105 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 A0A1W2PR77 199 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 J3KT08 172 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 M0R2P5 195 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 SLC25A20O43772 301 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 DUSP14O95147 198 aaKnown RBP3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 PLAUP00749 431 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 IGHV3-9P01782 118 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 IGLC6P0CF74 106 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 ERHP84090 104 aaKnown RBP3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 TMEM30BQ3MIR4 351 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 LYZL1Q6UWQ5 148 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 ZFP2Q6ZN57 461 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 Q6ZQT7 251 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 GOLT1AQ6ZVE7 132 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 PRNTQ86SH4 94 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 NDUFA11Q86Y39 141 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 TUSC5Q8IXB3 177 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 LYPD1Q8N2G4 141 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 Q8N8P6 123 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 BAALCQ8WXS3 180 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 RNF185Q96GF1 192 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 IMMP1LQ96LU5 166 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 DCTN5Q9BTE1 182 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 CALYQ9NYX4 217 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 PROCRQ9UNN8 238 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 KNTC1P50748 2209 aa3.68□□□□□ -1.82
CDC42BPA-213ENST00000488131 TRAV8-2A0A0B4J237 113 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 LOC107984156A0A0G2JMH3 177 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 MBD3L5A6NJ08 208 aaPredicted RBP3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 F8VRH5 84 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 ZNHIT1O43257 154 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 SCGB2A1O75556 95 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 SAA1P0DJI8 122 aaPredicted RBP3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 P0DMU3 169 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 FAM231AP0DMU4 169 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 FAM231CP0DMU5 169 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 COX6B1P14854 86 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 RPS28P62857 69 aaKnown RBP3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 HES1Q14469 280 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 DEFB133Q30KQ1 61 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 ARL17AQ8IVW1 177 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 C10orf126Q8N4M7 172 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 CD177Q8N6Q3 437 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 C15orf53Q8NAA6 179 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 FLYWCH2Q96CP2 140 aaKnown RBP3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 MRPL20Q9BYC9 149 aaKnown RBP3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 CXXC4Q9H2H0 198 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 MRPL36Q9P0J6 103 aaKnown RBP3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 F5P12259 2224 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 TNCP24821 2201 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 CNTRLQ7Z7A1 2325 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 SMKR1H3BMG3 65 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 H7C1H1 209 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 K7EM74 188 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 SCRG1O75711 98 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 CEACAM4O75871 244 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 COX6A1P12074 109 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 HLA-DMBP28068 263 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 WT1-ASQ06250 92 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 ZNF575Q86XF7 245 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 TMEM167AQ8TBQ9 72 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms