RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 ZC2HC1AQ96GY0 325 aa0.86□□□□□ -2.27
NSMCE4A-210ENST00000483541 TRAPPC2LQ9UL33 140 aa0.86□□□□□ -2.27
NSMCE4A-210ENST00000483541 SPTBP11277 2137 aa0.86□□□□□ -2.27
NSMCE4A-210ENST00000483541 LAMA4Q16363 1823 aa0.85□□□□□ -2.27
NSMCE4A-210ENST00000483541 KIAA1549LQ6ZVL6 1849 aa0.85□□□□□ -2.27
NSMCE4A-210ENST00000483541 TET1Q8NFU7 2136 aa0.85□□□□□ -2.27
NSMCE4A-210ENST00000483541 TRAV13-1A0A0B4J241 112 aa0.85□□□□□ -2.27
NSMCE4A-210ENST00000483541 TRACP01848 142 aa0.85□□□□□ -2.27
NSMCE4A-210ENST00000483541 SRP9P49458 86 aaKnown RBP0.85□□□□□ -2.27
NSMCE4A-210ENST00000483541 FOXI2Q6ZQN5 318 aa0.85□□□□□ -2.27
NSMCE4A-210ENST00000483541 TEX29Q8N6K0 151 aa0.85□□□□□ -2.27
NSMCE4A-210ENST00000483541 TMEM35BQ8NCS4 154 aa0.85□□□□□ -2.27
NSMCE4A-210ENST00000483541 CLEC2BQ92478 149 aa0.85□□□□□ -2.27
NSMCE4A-210ENST00000483541 WFDC10AQ9H1F0 79 aa0.85□□□□□ -2.27
NSMCE4A-210ENST00000483541 NDUFAF1Q9Y375 327 aa0.85□□□□□ -2.27
NSMCE4A-210ENST00000483541 ZDBF2Q9HCK1 2354 aa0.85□□□□□ -2.27
NSMCE4A-210ENST00000483541 A2MP01023 1474 aa0.85□□□□□ -2.27
NSMCE4A-210ENST00000483541 COL1A1P02452 1464 aaPredicted RBP0.85□□□□□ -2.27
NSMCE4A-210ENST00000483541 XIRP1Q702N8 1843 aaKnown RBP0.85□□□□□ -2.27
NSMCE4A-210ENST00000483541 ANK1P16157 1881 aa0.84□□□□□ -2.27
NSMCE4A-210ENST00000483541 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.84□□□□□ -2.27
NSMCE4A-210ENST00000483541 MYH1P12882 1939 aa0.84□□□□□ -2.27
NSMCE4A-210ENST00000483541 BCL9O00512 1426 aa0.84□□□□□ -2.27
NSMCE4A-210ENST00000483541 TRAV23DV6A0A075B6W5 121 aa0.84□□□□□ -2.27
NSMCE4A-210ENST00000483541 TRBV7-6A0A0J9YX20 115 aa0.84□□□□□ -2.27
NSMCE4A-210ENST00000483541 TRBV27A0A0K0K1C4 114 aa0.84□□□□□ -2.27
NSMCE4A-210ENST00000483541 PRORSD1PA6NEY8 169 aa0.84□□□□□ -2.27
NSMCE4A-210ENST00000483541 SAA1P0DJI8 122 aaPredicted RBP0.84□□□□□ -2.27
NSMCE4A-210ENST00000483541 RPL7P18124 248 aaKnown RBP0.84□□□□□ -2.27
NSMCE4A-210ENST00000483541 DR1Q01658 176 aa0.84□□□□□ -2.27
NSMCE4A-210ENST00000483541 MIR22HGQ0VDD5 57 aa0.84□□□□□ -2.27
NSMCE4A-210ENST00000483541 SPATA45Q537H7 98 aa0.84□□□□□ -2.27
NSMCE4A-210ENST00000483541 LINC00299Q6ZSB3 139 aa0.84□□□□□ -2.27
NSMCE4A-210ENST00000483541 CCL4L1Q8NHW4 92 aa0.84□□□□□ -2.27
NSMCE4A-210ENST00000483541 CCDC115Q96NT0 180 aa0.84□□□□□ -2.27
NSMCE4A-210ENST00000483541 TAF9BQ9HBM6 251 aa0.84□□□□□ -2.27
NSMCE4A-210ENST00000483541 HSPB11Q9Y547 144 aa0.84□□□□□ -2.27
NSMCE4A-210ENST00000483541 NINQ8N4C6 2090 aa0.84□□□□□ -2.28
NSMCE4A-210ENST00000483541 LOC107984640A0A0U1RRK4 108 aa0.83□□□□□ -2.28
NSMCE4A-210ENST00000483541 C3orf85A0A1B0GTC6 90 aa0.83□□□□□ -2.28
NSMCE4A-210ENST00000483541 LOC107986453A0A1B0GWG9 222 aa0.83□□□□□ -2.28
NSMCE4A-210ENST00000483541 ARL5CA6NH57 179 aa0.83□□□□□ -2.28
NSMCE4A-210ENST00000483541 EFNA4P52798 201 aa0.83□□□□□ -2.28
NSMCE4A-210ENST00000483541 LSM3P62310 102 aaKnown RBP0.83□□□□□ -2.28
NSMCE4A-210ENST00000483541 NEDD8Q15843 81 aa0.83□□□□□ -2.28
NSMCE4A-210ENST00000483541 LINC00575Q6W349 94 aa0.83□□□□□ -2.28
NSMCE4A-210ENST00000483541 LINC00269Q8N2A0 174 aa0.83□□□□□ -2.28
NSMCE4A-210ENST00000483541 AP1S3Q96PC3 154 aa0.83□□□□□ -2.28
NSMCE4A-210ENST00000483541 FAM135BQ49AJ0 1406 aa0.82□□□□□ -2.28
NSMCE4A-210ENST00000483541 H3BMG7 143 aa0.82□□□□□ -2.28
NSMCE4A-210ENST00000483541 J3KT08 172 aa0.82□□□□□ -2.28
NSMCE4A-210ENST00000483541 IGLV3-1P01715 115 aa0.82□□□□□ -2.28
NSMCE4A-210ENST00000483541 IGHV3-33P01772 117 aa0.82□□□□□ -2.28
NSMCE4A-210ENST00000483541 CRYGSP22914 178 aa0.82□□□□□ -2.28
NSMCE4A-210ENST00000483541 ZCCHC23Q6ZST2 131 aa0.82□□□□□ -2.28
NSMCE4A-210ENST00000483541 TAC4Q86UU9 113 aa0.82□□□□□ -2.28
NSMCE4A-210ENST00000483541 MORN4Q8NDC4 146 aa0.82□□□□□ -2.28
NSMCE4A-210ENST00000483541 OR10AC1Q8NH08 325 aa0.82□□□□□ -2.28
NSMCE4A-210ENST00000483541 BRK1Q8WUW1 75 aa0.82□□□□□ -2.28
NSMCE4A-210ENST00000483541 NIT2Q9NQR4 276 aa0.82□□□□□ -2.28
NSMCE4A-210ENST00000483541 GINS2Q9Y248 185 aa0.82□□□□□ -2.28
NSMCE4A-210ENST00000483541 CITO14578 2027 aa0.81□□□□□ -2.28
NSMCE4A-210ENST00000483541 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.81□□□□□ -2.28
NSMCE4A-210ENST00000483541 SULT1C4O75897 302 aa0.81□□□□□ -2.28
NSMCE4A-210ENST00000483541 RPS3P23396 243 aaKnown RBP eCLIP0.81□□□□□ -2.28
NSMCE4A-210ENST00000483541 GLIPR1L1Q6UWM5 242 aa0.81□□□□□ -2.28
NSMCE4A-210ENST00000483541 AKAP14Q86UN6 197 aa0.81□□□□□ -2.28
NSMCE4A-210ENST00000483541 OR5A2Q8NGI9 324 aa0.81□□□□□ -2.28
NSMCE4A-210ENST00000483541 OR51A4Q8NGJ6 313 aa0.81□□□□□ -2.28
NSMCE4A-210ENST00000483541 CIB3Q96Q77 187 aaPredicted RBP0.81□□□□□ -2.28
NSMCE4A-210ENST00000483541 CBLN4Q9NTU7 201 aa0.81□□□□□ -2.28
NSMCE4A-210ENST00000483541 BOKQ9UMX3 212 aaPredicted RBP0.81□□□□□ -2.28
NSMCE4A-210ENST00000483541 ANKRD30AQ9BXX3 1397 aa0.81□□□□□ -2.28
NSMCE4A-210ENST00000483541 OVOS2A0A0G2JMS6 1433 aa0.81□□□□□ -2.28
NSMCE4A-210ENST00000483541 KDM5CP41229 1560 aa0.8□□□□□ -2.28
NSMCE4A-210ENST00000483541 A0A1W2PPM0 123 aa0.8□□□□□ -2.28
NSMCE4A-210ENST00000483541 BBIP1A8MTZ0 92 aa0.8□□□□□ -2.28
NSMCE4A-210ENST00000483541 M0QZK8 103 aa0.8□□□□□ -2.28
NSMCE4A-210ENST00000483541 OR8I2Q8N0Y5 310 aa0.8□□□□□ -2.28
NSMCE4A-210ENST00000483541 TMEM229BQ8NBD8 167 aa0.8□□□□□ -2.28
NSMCE4A-210ENST00000483541 LIMD2Q9BT23 127 aa0.8□□□□□ -2.28
NSMCE4A-210ENST00000483541 SPANXA1Q9NS26 97 aa0.8□□□□□ -2.28
NSMCE4A-210ENST00000483541 FKBP11Q9NYL4 201 aa0.8□□□□□ -2.28
NSMCE4A-210ENST00000483541 KNTC1P50748 2209 aa0.8□□□□□ -2.28
NSMCE4A-210ENST00000483541 TRPM7Q96QT4 1865 aa0.8□□□□□ -2.28
NSMCE4A-210ENST00000483541 DPM2O94777 84 aa0.79□□□□□ -2.28
NSMCE4A-210ENST00000483541 CD14P08571 375 aa0.79□□□□□ -2.28
NSMCE4A-210ENST00000483541 NBEAP1P0C6P0 100 aa0.79□□□□□ -2.28
NSMCE4A-210ENST00000483541 RPL22P35268 128 aaKnown RBP0.79□□□□□ -2.28
NSMCE4A-210ENST00000483541 ETV6P41212 452 aa0.79□□□□□ -2.28
NSMCE4A-210ENST00000483541 FOXA3P55318 350 aaPredicted RBP0.79□□□□□ -2.28
NSMCE4A-210ENST00000483541 OCIAD2Q56VL3 154 aa0.79□□□□□ -2.28
NSMCE4A-210ENST00000483541 Q8N6K4 173 aa0.79□□□□□ -2.28
NSMCE4A-210ENST00000483541 C5orf17Q8NAS9 161 aa0.79□□□□□ -2.28
NSMCE4A-210ENST00000483541 NAT14Q8WUY8 206 aa0.79□□□□□ -2.28
NSMCE4A-210ENST00000483541 AIF1LQ9BQI0 150 aa0.79□□□□□ -2.28
NSMCE4A-210ENST00000483541 LPAR5Q9H1C0 372 aa0.79□□□□□ -2.28
NSMCE4A-210ENST00000483541 VIRMAQ69YN4 1812 aaKnown RBP0.79□□□□□ -2.28
NSMCE4A-210ENST00000483541 DSPPQ9NZW4 1301 aa0.79□□□□□ -2.28
NSMCE4A-210ENST00000483541 ATG2AQ2TAZ0 1938 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms