RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 UBE2BP63146 152 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 HBBP68871 147 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 SPANXN3Q5MJ09 141 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 C22orf39Q6P5X5 142 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 FOXI2Q6ZQN5 318 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 AAED1Q7RTV5 226 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 LINC00311Q8N616 119 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 WFDC11Q8NEX6 87 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 SMCR5Q8TEV8 140 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 MRPS24Q96EL2 167 aaKnown RBP1.94□□□□□ -2.1
SF3B1-210ENST00000482158 DPH3Q96FX2 82 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 CIB3Q96Q77 187 aaPredicted RBP1.94□□□□□ -2.1
SF3B1-210ENST00000482158 SNRNP25Q9BV90 132 aaKnown RBP1.94□□□□□ -2.1
SF3B1-210ENST00000482158 TIMM21Q9BVV7 248 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 Q9H521 79 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 RERGLQ9H628 205 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 RPRMQ9NS64 109 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 TAS2R8Q9NYW2 309 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 CCDC167Q9P0B6 97 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 CC2D2AQ9P2K1 1620 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 RRBP1Q9P2E9 1410 aaKnown RBP1.93□□□□□ -2.1
SF3B1-210ENST00000482158 PPLO60437 1756 aa1.93□□□□□ -2.1
SF3B1-210ENST00000482158 TOPBP1Q92547 1522 aa1.93□□□□□ -2.1
SF3B1-210ENST00000482158 RIMBP3CA6NJZ7 1639 aa1.93□□□□□ -2.1
SF3B1-210ENST00000482158 RIMBP3BA6NNM3 1639 aa1.93□□□□□ -2.1
SF3B1-210ENST00000482158 RIMBP3Q9UFD9 1639 aa1.93□□□□□ -2.1
SF3B1-210ENST00000482158 TRBV27A0A0K0K1C4 114 aa1.93□□□□□ -2.1
SF3B1-210ENST00000482158 A0A1W2PQD3 144 aa1.93□□□□□ -2.1
SF3B1-210ENST00000482158 CD2P06729 351 aa1.93□□□□□ -2.1
SF3B1-210ENST00000482158 CD14P08571 375 aa1.93□□□□□ -2.1
SF3B1-210ENST00000482158 CD24P25063 80 aa1.93□□□□□ -2.1
SF3B1-210ENST00000482158 S100A4P26447 101 aaKnown RBP1.93□□□□□ -2.1
SF3B1-210ENST00000482158 CSN1S1P47710 185 aa1.93□□□□□ -2.1
SF3B1-210ENST00000482158 CATR1Q13166 79 aa1.93□□□□□ -2.1
SF3B1-210ENST00000482158 IZUMO2Q6UXV1 221 aa1.93□□□□□ -2.1
SF3B1-210ENST00000482158 Q6ZRN7 208 aaPredicted RBP1.93□□□□□ -2.1
SF3B1-210ENST00000482158 SLC35E3Q7Z769 313 aa1.93□□□□□ -2.1
SF3B1-210ENST00000482158 LCN9Q8WX39 176 aa1.93□□□□□ -2.1
SF3B1-210ENST00000482158 PRO1933Q9H354 126 aa1.93□□□□□ -2.1
SF3B1-210ENST00000482158 SLC39A9Q9NUM3 307 aa1.93□□□□□ -2.1
SF3B1-210ENST00000482158 CCDC141Q6ZP82 1450 aa1.93□□□□□ -2.1
SF3B1-210ENST00000482158 IFT140Q96RY7 1462 aa1.93□□□□□ -2.1
SF3B1-210ENST00000482158 COL4A1P02462 1669 aa1.93□□□□□ -2.1
SF3B1-210ENST00000482158 RGPD4Q7Z3J3 1758 aa1.93□□□□□ -2.1
SF3B1-210ENST00000482158 ANK1P16157 1881 aa1.92□□□□□ -2.1
SF3B1-210ENST00000482158 CPSF1Q10570 1443 aaKnown RBP1.92□□□□□ -2.1
SF3B1-210ENST00000482158 NSD3Q9BZ95 1437 aa1.92□□□□□ -2.1
SF3B1-210ENST00000482158 DLC1Q96QB1 1528 aa1.92□□□□□ -2.1
SF3B1-210ENST00000482158 LEPROTO15243 131 aa1.92□□□□□ -2.1
SF3B1-210ENST00000482158 NDUFB3O43676 98 aa1.92□□□□□ -2.1
SF3B1-210ENST00000482158 SLC25A5P05141 298 aaKnown RBP1.92□□□□□ -2.1
SF3B1-210ENST00000482158 CTSDP07339 412 aaPredicted RBP1.92□□□□□ -2.1
SF3B1-210ENST00000482158 SPINK8P0C7L1 97 aa1.92□□□□□ -2.1
SF3B1-210ENST00000482158 HLA-DRB4P13762 266 aa1.92□□□□□ -2.1
SF3B1-210ENST00000482158 SRP14P37108 136 aaKnown RBP1.92□□□□□ -2.1
SF3B1-210ENST00000482158 HINT1P49773 126 aaPredicted RBP1.92□□□□□ -2.1
SF3B1-210ENST00000482158 YPEL3P61236 119 aaPredicted RBP1.92□□□□□ -2.1
SF3B1-210ENST00000482158 EIF5AP63241 154 aaKnown RBP1.92□□□□□ -2.1
SF3B1-210ENST00000482158 ZNF90Q03938 601 aa1.92□□□□□ -2.1
SF3B1-210ENST00000482158 TEN1Q86WV5 123 aa1.92□□□□□ -2.1
SF3B1-210ENST00000482158 LINC00471Q8N535 108 aa1.92□□□□□ -2.1
SF3B1-210ENST00000482158 TTC9CQ8N5M4 171 aa1.92□□□□□ -2.1
SF3B1-210ENST00000482158 MORN4Q8NDC4 146 aa1.92□□□□□ -2.1
SF3B1-210ENST00000482158 TTTY13Q9BZ97 58 aa1.92□□□□□ -2.1
SF3B1-210ENST00000482158 COMMD3Q9UBI1 195 aa1.92□□□□□ -2.1
SF3B1-210ENST00000482158 HLA-DRB4X5D2U9 266 aa1.92□□□□□ -2.1
SF3B1-210ENST00000482158 KTN1Q86UP2 1357 aaKnown RBP1.92□□□□□ -2.1
SF3B1-210ENST00000482158 ROBO1Q9Y6N7 1651 aa1.92□□□□□ -2.1
SF3B1-210ENST00000482158 RBBP6Q7Z6E9 1792 aaKnown RBP1.92□□□□□ -2.1
SF3B1-210ENST00000482158 ARHGAP5Q13017 1502 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 ADAMTS12P58397 1594 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 COL1A1P02452 1464 aaPredicted RBP1.91□□□□□ -2.1
SF3B1-210ENST00000482158 CFTRP13569 1480 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 TRGV5A0A0B4J1U4 118 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 A0A0J9YW62 118 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 PNMA8CA0A1B0GUJ8 204 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 C19orf84I3L1E1 186 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 UQCRQO14949 82 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 HIST1H2BKO60814 126 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 KLF7O75840 302 aaPredicted RBP1.91□□□□□ -2.1
SF3B1-210ENST00000482158 HIST1H2BJP06899 126 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 TRGC1P0CF51 173 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 PYYP10082 97 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 SNRPD3P62318 126 aaKnown RBP1.91□□□□□ -2.1
SF3B1-210ENST00000482158 RPL18Q07020 188 aaKnown RBP1.91□□□□□ -2.1
SF3B1-210ENST00000482158 KISS1Q15726 138 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 TMEM91Q6ZNR0 172 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 Q6ZTI0 123 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 C7orf65Q6ZTY9 151 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 ATOH7Q8N100 152 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 OR5D16Q8NGK9 328 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 PRELID3AQ96N28 172 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 YPEL2Q96QA6 119 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 EPDR1Q9UM22 224 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 CHCHD2Q9Y6H1 151 aaPredicted RBP1.91□□□□□ -2.1
SF3B1-210ENST00000482158 NUMA1Q14980 2115 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 MYH4Q9Y623 1939 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 ABCC3O15438 1527 aa1.91□□□□□ -2.1
SF3B1-210ENST00000482158 RGPD3A6NKT7 1758 aaPredicted RBP1.9□□□□□ -2.1
SF3B1-210ENST00000482158 ZC3H13Q5T200 1668 aaKnown RBP1.9□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms