RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-211ENST00000481154 SMDT1Q9H4I9 107 aa1.93□□□□□ -2.1
PTPN12-211ENST00000481154 XAGE1AQ9HD64 81 aa1.93□□□□□ -2.1
PTPN12-211ENST00000481154 CHD1O14646 1710 aa1.93□□□□□ -2.1
PTPN12-211ENST00000481154 POLA1P09884 1462 aaPredicted RBP1.93□□□□□ -2.1
PTPN12-211ENST00000481154 NCAPD3P42695 1498 aa1.93□□□□□ -2.1
PTPN12-211ENST00000481154 NEO1Q92859 1461 aa1.93□□□□□ -2.1
PTPN12-211ENST00000481154 NCKAP5O14513 1909 aa1.93□□□□□ -2.1
PTPN12-211ENST00000481154 AKAP12Q02952 1782 aa1.93□□□□□ -2.1
PTPN12-211ENST00000481154 DNMT1P26358 1616 aaKnown RBP1.92□□□□□ -2.1
PTPN12-211ENST00000481154 ICE1Q9Y2F5 2266 aa1.92□□□□□ -2.1
PTPN12-211ENST00000481154 TRBV24-1A0A075B6N3 115 aa1.92□□□□□ -2.1
PTPN12-211ENST00000481154 TRGV5A0A0B4J1U4 118 aa1.92□□□□□ -2.1
PTPN12-211ENST00000481154 A0A0D9SEW6 157 aa1.92□□□□□ -2.1
PTPN12-211ENST00000481154 ZNF705FA8MVS1 300 aaPredicted RBP1.92□□□□□ -2.1
PTPN12-211ENST00000481154 K7EP34 96 aa1.92□□□□□ -2.1
PTPN12-211ENST00000481154 M0R233 179 aa1.92□□□□□ -2.1
PTPN12-211ENST00000481154 SSSCA1O60232 199 aa1.92□□□□□ -2.1
PTPN12-211ENST00000481154 PITX3O75364 302 aa1.92□□□□□ -2.1
PTPN12-211ENST00000481154 PROSCO94903 275 aa1.92□□□□□ -2.1
PTPN12-211ENST00000481154 ZNF705BP0CI00 300 aaPredicted RBP1.92□□□□□ -2.1
PTPN12-211ENST00000481154 ZNF22P17026 224 aaPredicted RBP1.92□□□□□ -2.1
PTPN12-211ENST00000481154 NPC2P61916 151 aa1.92□□□□□ -2.1
PTPN12-211ENST00000481154 BSPH1Q075Z2 132 aa1.92□□□□□ -2.1
PTPN12-211ENST00000481154 LINC01554Q52M75 96 aa1.92□□□□□ -2.1
PTPN12-211ENST00000481154 LGALS9CQ6DKI2 356 aa1.92□□□□□ -2.1
PTPN12-211ENST00000481154 NOXRED1Q6NXP6 359 aa1.92□□□□□ -2.1
PTPN12-211ENST00000481154 LINC00471Q8N535 108 aa1.92□□□□□ -2.1
PTPN12-211ENST00000481154 VSTM2AQ8TAG5 236 aa1.92□□□□□ -2.1
PTPN12-211ENST00000481154 POP5Q969H6 163 aaKnown RBP1.92□□□□□ -2.1
PTPN12-211ENST00000481154 HIST1H2BLQ99880 126 aa1.92□□□□□ -2.1
PTPN12-211ENST00000481154 BCL2L10Q9HD36 194 aa1.92□□□□□ -2.1
PTPN12-211ENST00000481154 DNAJC15Q9Y5T4 150 aa1.92□□□□□ -2.1
PTPN12-211ENST00000481154 LINC00312Q9Y6C7 94 aa1.92□□□□□ -2.1
PTPN12-211ENST00000481154 KDM5AP29375 1690 aaKnown RBP1.92□□□□□ -2.1
PTPN12-211ENST00000481154 NUP210Q8TEM1 1887 aaPredicted RBP1.92□□□□□ -2.1
PTPN12-211ENST00000481154 RTEL1-TNFRSF6BF6WH68 1400 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 DAPK1P53355 1430 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 SHANK3Q9BYB0 1731 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 FOCADQ5VW36 1801 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 PHIPQ8WWQ0 1821 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 ATG2BQ96BY7 2078 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 CCDC88BA6NC98 1476 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 IGKV1D-43A0A0B4J1Z2 117 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 MUC21A0A0G2JKD1 596 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 IGLC7A0M8Q6 106 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 OOSP1A8MZH6 123 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 BUB1B-PAK6H3BSN5 160 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 IGKV1-5P01602 117 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 GYPBP06028 91 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 COX6A1P12074 109 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 RPL27AP46776 148 aaKnown RBP1.91□□□□□ -2.1
PTPN12-211ENST00000481154 PCBD1P61457 104 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 SNRPD3P62318 126 aaKnown RBP1.91□□□□□ -2.1
PTPN12-211ENST00000481154 SEC11AP67812 179 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 Q0VG73 95 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 UNQ5815/PRO19632Q6UWF5 114 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 DPPA3Q6W0C5 159 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 OR2T35Q8NGX2 323 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 IMMP2LQ96T52 175 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 ST20Q9HBF5 79 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 TAS2R4Q9NYW5 299 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 CACFD1Q9UGQ2 172 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 SMARCA4P51532 1647 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 RGS12O14924 1447 aa1.91□□□□□ -2.1
PTPN12-211ENST00000481154 SORL1Q92673 2214 aa1.9□□□□□ -2.1
PTPN12-211ENST00000481154 SYNJ1O43426 1573 aa1.9□□□□□ -2.1
PTPN12-211ENST00000481154 FANCAO15360 1455 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 FANCMQ8IYD8 2048 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 COL11A1P12107 1806 aaPredicted RBP1.9□□□□□ -2.11
PTPN12-211ENST00000481154 PSME4Q14997 1843 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 H3BRM9 83 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 M0R129 80 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 GNGT2O14610 69 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 LEPROTO15243 131 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 LYRM1O43325 122 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 OR1I1O60431 355 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 SH2D1AO60880 128 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 TCL1BO95988 128 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 MT-ATP8P03928 68 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 COX7CP15954 63 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 NPPCP23582 126 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 HLA-DMBP28068 263 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 CKS2P33552 79 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 POLR2JP52435 117 aaKnown RBP1.9□□□□□ -2.11
PTPN12-211ENST00000481154 BLCAPP62952 87 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 CIRBPQ14011 172 aaKnown RBP1.9□□□□□ -2.11
PTPN12-211ENST00000481154 TDRG1Q3Y452 100 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 C12orf73Q69YU5 71 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 ATP11AUNQ6ZP68 121 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 C7orf65Q6ZTY9 151 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 MIR17HGQ75NE6 70 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 OR5AS1Q8N127 324 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 FAM216BQ8N7L0 139 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 C15orf53Q8NAA6 179 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 WFDC5Q8TCV5 224 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 TSKUQ8WUA8 353 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 DIRC1Q969H9 104 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 SCGB3A1Q96QR1 104 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 MGST2Q99735 147 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 B9D2Q9BPU9 175 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms