RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 AGPAT4-IT1Q9H0P7 198 aa9.09□□□□□ -0.95
PRPF39-203ENST00000477626 CSN3P07498 182 aa9.08□□□□□ -0.96
PRPF39-203ENST00000477626 ZFAND2AQ8N6M9 145 aa9.08□□□□□ -0.96
PRPF39-203ENST00000477626 RAX2Q96IS3 184 aa9.08□□□□□ -0.96
PRPF39-203ENST00000477626 RHPN1-AS1Q9BWJ2 59 aa9.08□□□□□ -0.96
PRPF39-203ENST00000477626 SIGLEC8Q9NYZ4 499 aa9.08□□□□□ -0.96
PRPF39-203ENST00000477626 C2orf70A6NJV1 201 aa9.08□□□□□ -0.96
PRPF39-203ENST00000477626 IGLC6P0CF74 106 aa9.08□□□□□ -0.96
PRPF39-203ENST00000477626 RPP21Q9H633 154 aaKnown RBP9.08□□□□□ -0.96
PRPF39-203ENST00000477626 IZUMO1RA6ND01 250 aa9.08□□□□□ -0.96
PRPF39-203ENST00000477626 CT45A10P0DMU9 189 aa9.08□□□□□ -0.96
PRPF39-203ENST00000477626 GNB1LQ9BYB4 327 aa9.08□□□□□ -0.96
PRPF39-203ENST00000477626 TRBV7-9A0A0J9YWB2 115 aa9.07□□□□□ -0.96
PRPF39-203ENST00000477626 K7EQG2 157 aa9.07□□□□□ -0.96
PRPF39-203ENST00000477626 PRB4P10163 310 aaPredicted RBP9.07□□□□□ -0.96
PRPF39-203ENST00000477626 CRISP2P16562 243 aa9.07□□□□□ -0.96
PRPF39-203ENST00000477626 S100A7P31151 101 aa9.07□□□□□ -0.96
PRPF39-203ENST00000477626 Q6ZQT7 251 aa9.07□□□□□ -0.96
PRPF39-203ENST00000477626 CLEC5AQ9NY25 188 aa9.07□□□□□ -0.96
PRPF39-203ENST00000477626 TRGC1P0CF51 173 aa9.07□□□□□ -0.96
PRPF39-203ENST00000477626 ERVFC1-1P60608 527 aa9.07□□□□□ -0.96
PRPF39-203ENST00000477626 SLC35B1P78383 322 aa9.07□□□□□ -0.96
PRPF39-203ENST00000477626 OR4B1Q8NGF8 309 aa9.07□□□□□ -0.96
PRPF39-203ENST00000477626 NRN1Q9NPD7 142 aa9.07□□□□□ -0.96
PRPF39-203ENST00000477626 TRAV2A0A0B4J234 112 aa9.06□□□□□ -0.96
PRPF39-203ENST00000477626 ESDP10768 282 aa9.06□□□□□ -0.96
PRPF39-203ENST00000477626 ERCC8Q13216 396 aa9.06□□□□□ -0.96
PRPF39-203ENST00000477626 RPEL1Q2QD12 228 aa9.06□□□□□ -0.96
PRPF39-203ENST00000477626 LINC01559Q495D7 138 aa9.06□□□□□ -0.96
PRPF39-203ENST00000477626 UFC1Q9Y3C8 167 aa9.06□□□□□ -0.96
PRPF39-203ENST00000477626 IGHV3-49A0A0A0MS15 119 aa9.06□□□□□ -0.96
PRPF39-203ENST00000477626 ATF4P18848 351 aaPredicted RBP9.06□□□□□ -0.96
PRPF39-203ENST00000477626 DNLZQ5SXM8 178 aa9.06□□□□□ -0.96
PRPF39-203ENST00000477626 HIST2H2BDQ6DRA6 164 aa9.06□□□□□ -0.96
PRPF39-203ENST00000477626 ZFP82Q8N141 532 aa9.06□□□□□ -0.96
PRPF39-203ENST00000477626 NEU1Q99519 415 aa9.06□□□□□ -0.96
PRPF39-203ENST00000477626 LENEPQ9Y5L5 61 aa9.06□□□□□ -0.96
PRPF39-203ENST00000477626 FN1P02751 2386 aaKnown RBP9.06□□□□□ -0.96
PRPF39-203ENST00000477626 CD28P10747 220 aa9.06□□□□□ -0.96
PRPF39-203ENST00000477626 CBLN1P23435 193 aa9.06□□□□□ -0.96
PRPF39-203ENST00000477626 IGHV3OR16-13A0A075B7E8 117 aa9.05□□□□□ -0.96
PRPF39-203ENST00000477626 IGHV3-74A0A0B4J1X5 117 aa9.05□□□□□ -0.96
PRPF39-203ENST00000477626 KLLNB2CW77 178 aa9.05□□□□□ -0.96
PRPF39-203ENST00000477626 HOXA5P20719 270 aa9.05□□□□□ -0.96
PRPF39-203ENST00000477626 CTRLP40313 264 aa9.05□□□□□ -0.96
PRPF39-203ENST00000477626 PRNTQ86SH4 94 aa9.05□□□□□ -0.96
PRPF39-203ENST00000477626 SRD5A1P18405 259 aa9.05□□□□□ -0.96
PRPF39-203ENST00000477626 SLURP1P55000 103 aa9.05□□□□□ -0.96
PRPF39-203ENST00000477626 DMRTA1Q5VZB9 504 aa9.05□□□□□ -0.96
PRPF39-203ENST00000477626 ATP5L2Q7Z4Y8 100 aa9.05□□□□□ -0.96
PRPF39-203ENST00000477626 Q8TAT8 98 aa9.05□□□□□ -0.96
PRPF39-203ENST00000477626 ZNF256Q9Y2P7 627 aaPredicted RBP9.05□□□□□ -0.96
PRPF39-203ENST00000477626 Q6AWC8 147 aa9.05□□□□□ -0.96
PRPF39-203ENST00000477626 AMTNQ6UX39 209 aa9.05□□□□□ -0.96
PRPF39-203ENST00000477626 SSBP4Q9BWG4 385 aaPredicted RBP9.05□□□□□ -0.96
PRPF39-203ENST00000477626 MS4A6AQ9H2W1 248 aa9.05□□□□□ -0.96
PRPF39-203ENST00000477626 AAMDCQ9H7C9 122 aa9.05□□□□□ -0.96
PRPF39-203ENST00000477626 IGKV3D-20A0A0C4DH25 116 aa9.04□□□□□ -0.96
PRPF39-203ENST00000477626 HAX1O00165 279 aa9.04□□□□□ -0.96
PRPF39-203ENST00000477626 SH2D1AO60880 128 aa9.04□□□□□ -0.96
PRPF39-203ENST00000477626 UBE2G1P62253 170 aa9.04□□□□□ -0.96
PRPF39-203ENST00000477626 DEFB136Q30KP8 78 aa9.04□□□□□ -0.96
PRPF39-203ENST00000477626 ZNF493Q6ZR52 646 aa9.04□□□□□ -0.96
PRPF39-203ENST00000477626 BTF3L4Q96K17 158 aa9.04□□□□□ -0.96
PRPF39-203ENST00000477626 A0A1W2PPQ1 181 aa9.04□□□□□ -0.96
PRPF39-203ENST00000477626 ODF3Q96PU9 254 aa9.04□□□□□ -0.96
PRPF39-203ENST00000477626 LINC01619G3V211 115 aa9.04□□□□□ -0.96
PRPF39-203ENST00000477626 OR5B12Q96R08 314 aa9.04□□□□□ -0.96
PRPF39-203ENST00000477626 KCNIP4Q6PIL6 250 aa9.03□□□□□ -0.96
PRPF39-203ENST00000477626 HIST3H2BBQ8N257 126 aa9.03□□□□□ -0.96
PRPF39-203ENST00000477626 DLX4Q92988 240 aaPredicted RBP9.03□□□□□ -0.96
PRPF39-203ENST00000477626 DEFB1P60022 68 aa9.03□□□□□ -0.96
PRPF39-203ENST00000477626 SCRT2Q9NQ03 307 aa9.03□□□□□ -0.96
PRPF39-203ENST00000477626 NAT8BQ9UHF3 227 aa9.03□□□□□ -0.96
PRPF39-203ENST00000477626 IGHV4-4A0A075B6R2 117 aa9.02□□□□□ -0.96
PRPF39-203ENST00000477626 A0A1W2PS18 150 aa9.02□□□□□ -0.96
PRPF39-203ENST00000477626 HIGD1CA8MV81 97 aa9.02□□□□□ -0.96
PRPF39-203ENST00000477626 C1orf196B1AJZ1 125 aa9.02□□□□□ -0.96
PRPF39-203ENST00000477626 SYNJ2BPP57105 145 aa9.02□□□□□ -0.96
PRPF39-203ENST00000477626 SLAQ13239 276 aa9.02□□□□□ -0.96
PRPF39-203ENST00000477626 FAM106AQ4KMX7 169 aa9.02□□□□□ -0.96
PRPF39-203ENST00000477626 OR9G4Q8NGQ1 327 aa9.02□□□□□ -0.96
PRPF39-203ENST00000477626 BIN3Q9NQY0 253 aa9.02□□□□□ -0.96
PRPF39-203ENST00000477626 CRLF1O75462 422 aa9.02□□□□□ -0.97
PRPF39-203ENST00000477626 RPS10P46783 165 aaKnown RBP9.02□□□□□ -0.97
PRPF39-203ENST00000477626 RPL19P84098 196 aaKnown RBP9.02□□□□□ -0.97
PRPF39-203ENST00000477626 SAPCD1Q5SSQ6 148 aa9.02□□□□□ -0.97
PRPF39-203ENST00000477626 GFI1BQ5VTD9 330 aa9.02□□□□□ -0.97
PRPF39-203ENST00000477626 CMTM2Q8TAZ6 248 aa9.02□□□□□ -0.97
PRPF39-203ENST00000477626 URB1-AS1Q96HZ7 61 aa9.02□□□□□ -0.97
PRPF39-203ENST00000477626 U3KQK5 164 aa9.02□□□□□ -0.97
PRPF39-203ENST00000477626 GBGT1Q8N5D6 347 aa9.02□□□□□ -0.97
PRPF39-203ENST00000477626 ZNF705GA8MUZ8 300 aaPredicted RBP9.01□□□□□ -0.97
PRPF39-203ENST00000477626 ZNF324O75467 553 aaPredicted RBP9.01□□□□□ -0.97
PRPF39-203ENST00000477626 MGST1P10620 155 aaKnown RBP9.01□□□□□ -0.97
PRPF39-203ENST00000477626 ZNF138P52744 262 aa9.01□□□□□ -0.97
PRPF39-203ENST00000477626 FAM162BQ5T6X4 162 aa9.01□□□□□ -0.97
PRPF39-203ENST00000477626 MUC4Q99102 2169 aa9.01□□□□□ -0.97
PRPF39-203ENST00000477626 SNRPEP62304 92 aaKnown RBP9.01□□□□□ -0.97
PRPF39-203ENST00000477626 MTORP42345 2549 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms