RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 KRTAP4-9Q9BYQ8 210 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 MAP6D1Q9H9H5 199 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 SLC25A15Q9Y619 301 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 PCNX3Q9H6A9 2034 aa4.48□□□□□ -1.69
SPTLC3-205ENST00000476791 TRAV9-1A0A075B6T8 112 aa4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 C15orf62A8K5M9 175 aa4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 UBE2L6O14933 153 aa4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 FOLR3P41439 243 aa4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 NTN5Q8WTR8 489 aaPredicted RBP4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 ZNF524Q96C55 264 aa4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 ATXN7L3BQ96GX2 97 aa4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 FAM218AQ96MZ4 157 aa4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 MCEEQ96PE7 176 aa4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 NUP98P52948 1817 aa4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 PTPRDP23468 1912 aa4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 EP400Q96L91 3159 aa4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 NDUFB3O43676 98 aa4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 IL9P15248 144 aa4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 SYNJ2BPP57105 145 aa4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 HOXA4Q00056 320 aaPredicted RBP4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 RPL18Q07020 188 aaKnown RBP4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 NCOA6Q14686 2063 aaPredicted RBP4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 FAM57BQ71RH2 274 aa4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 PHF5AQ7RTV0 110 aaKnown RBP4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 GPHB5Q86YW7 130 aa4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 CCL13Q99616 98 aa4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 LIME1Q9H400 295 aa4.47□□□□□ -1.69
SPTLC3-205ENST00000476791 LOC389332A0A1B0GUA5 103 aa4.46□□□□□ -1.7
SPTLC3-205ENST00000476791 IGKV1-5P01602 117 aa4.46□□□□□ -1.7
SPTLC3-205ENST00000476791 IGKV1-16P04430 117 aa4.46□□□□□ -1.7
SPTLC3-205ENST00000476791 C12orf73Q69YU5 71 aa4.46□□□□□ -1.7
SPTLC3-205ENST00000476791 ZNRF1Q8ND25 227 aa4.46□□□□□ -1.7
SPTLC3-205ENST00000476791 SLC50A1Q9BRV3 221 aa4.46□□□□□ -1.7
SPTLC3-205ENST00000476791 BPESC1Q9GZL8 116 aa4.46□□□□□ -1.7
SPTLC3-205ENST00000476791 DOCK11Q5JSL3 2073 aa4.46□□□□□ -1.7
SPTLC3-205ENST00000476791 IGLV3-10A0A075B6K4 115 aa4.46□□□□□ -1.7
SPTLC3-205ENST00000476791 PRB4P10163 310 aaPredicted RBP4.46□□□□□ -1.7
SPTLC3-205ENST00000476791 MGST2Q99735 147 aa4.46□□□□□ -1.7
SPTLC3-205ENST00000476791 ZNF492Q9P255 531 aa4.46□□□□□ -1.7
SPTLC3-205ENST00000476791 THADAQ6YHU6 1953 aa4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 DDX60Q8IY21 1712 aaKnown RBP4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 IGKV1-27A0A075B6S5 117 aa4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 TRAV1-2A0A0B4J238 106 aa4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 TEX49A0A1B0GTD5 131 aa4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 ZNF22P17026 224 aaPredicted RBP4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 S100A3P33764 101 aa4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 PRR3P79522 188 aaKnown RBP4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 SFTA2Q6UW10 78 aa4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 ZNF645Q8N7E2 425 aa4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 GVQW1Q8N7I0 195 aa4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 ITLN1Q8WWA0 313 aa4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 ITLN2Q8WWU7 325 aaPredicted RBP4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 UBR3Q6ZT12 1888 aa4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 DLEC1Q9Y238 1755 aa4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 SCN3AQ9NY46 2000 aa4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 IGHV5-51A0A0C4DH38 117 aa4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 SLC25A20O43772 301 aa4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 TRBV12-3P01733 135 aa4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 MGST1P10620 155 aaKnown RBP4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 UBE2D3P61077 147 aa4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 UBE2D2P62837 147 aa4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 SOSTDC1Q6X4U4 206 aa4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 URB1-AS1Q96HZ7 61 aa4.45□□□□□ -1.7
SPTLC3-205ENST00000476791 KCPQ6ZWJ8 1503 aa4.44□□□□□ -1.7
SPTLC3-205ENST00000476791 COL1A1P02452 1464 aaPredicted RBP4.44□□□□□ -1.7
SPTLC3-205ENST00000476791 SHROOM3Q8TF72 1996 aa4.44□□□□□ -1.7
SPTLC3-205ENST00000476791 MPDZO75970 2070 aa4.44□□□□□ -1.7
SPTLC3-205ENST00000476791 IGHV3OR15-7A0A075B7D8 119 aa4.44□□□□□ -1.7
SPTLC3-205ENST00000476791 A0A0J9YXV3 536 aa4.44□□□□□ -1.7
SPTLC3-205ENST00000476791 TRIAP1O43715 76 aa4.44□□□□□ -1.7
SPTLC3-205ENST00000476791 LEPROTL1O95214 131 aa4.44□□□□□ -1.7
SPTLC3-205ENST00000476791 SPINT3P49223 89 aa4.44□□□□□ -1.7
SPTLC3-205ENST00000476791 BRWD1-AS2P59051 145 aa4.44□□□□□ -1.7
SPTLC3-205ENST00000476791 FAM229BQ4G0N7 80 aa4.44□□□□□ -1.7
SPTLC3-205ENST00000476791 PTPRSQ13332 1948 aa4.44□□□□□ -1.7
SPTLC3-205ENST00000476791 NACAE9PAV3 2078 aa4.44□□□□□ -1.7
SPTLC3-205ENST00000476791 GOLGA4Q13439 2230 aaKnown RBP4.44□□□□□ -1.7
SPTLC3-205ENST00000476791 IGHV1-24A0A0C4DH33 117 aa4.44□□□□□ -1.7
SPTLC3-205ENST00000476791 CRYM-AS1A6NIL9 109 aa4.44□□□□□ -1.7
SPTLC3-205ENST00000476791 HBDP02042 147 aa4.44□□□□□ -1.7
SPTLC3-205ENST00000476791 ZNF876PQ49A33 203 aa4.44□□□□□ -1.7
SPTLC3-205ENST00000476791 LTBP1Q14766 1721 aa4.43□□□□□ -1.7
SPTLC3-205ENST00000476791 TIAM2Q8IVF5 1701 aa4.43□□□□□ -1.7
SPTLC3-205ENST00000476791 ARID1AO14497 2285 aa4.43□□□□□ -1.7
SPTLC3-205ENST00000476791 LOC107984156A0A0G2JMH3 177 aa4.43□□□□□ -1.7
SPTLC3-205ENST00000476791 H7BZZ5 65 aa4.43□□□□□ -1.7
SPTLC3-205ENST00000476791 NXPH4O95158 308 aa4.43□□□□□ -1.7
SPTLC3-205ENST00000476791 IL4P05112 153 aa4.43□□□□□ -1.7
SPTLC3-205ENST00000476791 MRPS36P82909 103 aaKnown RBP4.43□□□□□ -1.7
SPTLC3-205ENST00000476791 KISS1Q15726 138 aa4.43□□□□□ -1.7
SPTLC3-205ENST00000476791 FAM104BQ5XKR9 115 aa4.43□□□□□ -1.7
SPTLC3-205ENST00000476791 ARL17AQ8IVW1 177 aa4.43□□□□□ -1.7
SPTLC3-205ENST00000476791 COPS9Q8WXC6 57 aa4.43□□□□□ -1.7
SPTLC3-205ENST00000476791 TOMM6Q96B49 74 aa4.43□□□□□ -1.7
SPTLC3-205ENST00000476791 LINC01600Q96MT4 127 aa4.43□□□□□ -1.7
SPTLC3-205ENST00000476791 OPRPNQ99935 248 aaPredicted RBP4.43□□□□□ -1.7
SPTLC3-205ENST00000476791 GREB1Q4ZG55 1949 aa4.43□□□□□ -1.7
SPTLC3-205ENST00000476791 IGKV1D-17A0A075B6S4 117 aa4.43□□□□□ -1.7
SPTLC3-205ENST00000476791 A8MU10 97 aa4.43□□□□□ -1.7
SPTLC3-205ENST00000476791 AQP1P29972 269 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms