RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 MOB4Q9Y3A3 225 aa12.85□□□□□ -0.35
TVP23B-202ENST00000476139 TSPOP30536 169 aa12.84□□□□□ -0.35
TVP23B-202ENST00000476139 KLK9Q2XQG4 91 aa12.84□□□□□ -0.35
TVP23B-202ENST00000476139 KLK9Q9UKQ9 250 aa12.84□□□□□ -0.35
TVP23B-202ENST00000476139 TRAV41A0A0B4J266 112 aa12.84□□□□□ -0.35
TVP23B-202ENST00000476139 LOC389332A0A1B0GUA5 103 aa12.84□□□□□ -0.35
TVP23B-202ENST00000476139 HAX1O00165 279 aa12.84□□□□□ -0.35
TVP23B-202ENST00000476139 DLEU1O43261 78 aa12.84□□□□□ -0.35
TVP23B-202ENST00000476139 FXYD7P58549 80 aa12.84□□□□□ -0.35
TVP23B-202ENST00000476139 COL5A1-AS1Q5SY13 56 aa12.84□□□□□ -0.35
TVP23B-202ENST00000476139 PRR25Q96S07 402 aa12.84□□□□□ -0.35
TVP23B-202ENST00000476139 LRRK2Q5S007 2527 aa12.84□□□□□ -0.35
TVP23B-202ENST00000476139 PRAC2D3DTV9 90 aa12.84□□□□□ -0.35
TVP23B-202ENST00000476139 GOSR1O95249 250 aa12.84□□□□□ -0.35
TVP23B-202ENST00000476139 AVPP01185 164 aa12.84□□□□□ -0.35
TVP23B-202ENST00000476139 CT45A10P0DMU9 189 aa12.84□□□□□ -0.35
TVP23B-202ENST00000476139 ZNF80P51504 273 aaPredicted RBP12.84□□□□□ -0.35
TVP23B-202ENST00000476139 EEF1AKMT3Q96AZ1 226 aa12.84□□□□□ -0.35
TVP23B-202ENST00000476139 TMEM213A2RRL7 107 aa12.83□□□□□ -0.36
TVP23B-202ENST00000476139 ERCC8Q13216 396 aa12.83□□□□□ -0.36
TVP23B-202ENST00000476139 FAM106AQ4KMX7 169 aa12.83□□□□□ -0.36
TVP23B-202ENST00000476139 SYS1-DBNDD2H3BUS1 97 aa12.83□□□□□ -0.36
TVP23B-202ENST00000476139 Q6ZS46 218 aa12.83□□□□□ -0.36
TVP23B-202ENST00000476139 MEGF9Q9H1U4 602 aa12.83□□□□□ -0.36
TVP23B-202ENST00000476139 GOLT1BQ9Y3E0 138 aa12.83□□□□□ -0.36
TVP23B-202ENST00000476139 TMEM8BA6NDV4 472 aa12.82□□□□□ -0.36
TVP23B-202ENST00000476139 SH2D1AO60880 128 aa12.82□□□□□ -0.36
TVP23B-202ENST00000476139 BLCAPP62952 87 aa12.82□□□□□ -0.36
TVP23B-202ENST00000476139 ATP5G2Q06055 141 aa12.82□□□□□ -0.36
TVP23B-202ENST00000476139 NDFIP1Q9BT67 221 aa12.82□□□□□ -0.36
TVP23B-202ENST00000476139 H3BUX3 64 aa12.82□□□□□ -0.36
TVP23B-202ENST00000476139 NDUFS8O00217 210 aa12.82□□□□□ -0.36
TVP23B-202ENST00000476139 TRBV7-1A0A0A6YYK4 115 aa12.81□□□□□ -0.36
TVP23B-202ENST00000476139 MSMBP08118 114 aa12.81□□□□□ -0.36
TVP23B-202ENST00000476139 LYZL1Q6UWQ5 148 aa12.81□□□□□ -0.36
TVP23B-202ENST00000476139 HIF1ANQ9NWT6 349 aa12.81□□□□□ -0.36
TVP23B-202ENST00000476139 TRBV12-3P01733 135 aa12.81□□□□□ -0.36
TVP23B-202ENST00000476139 TRGV3P03979 118 aa12.81□□□□□ -0.36
TVP23B-202ENST00000476139 RIGQ13278 110 aa12.81□□□□□ -0.36
TVP23B-202ENST00000476139 C19orf54Q5BKX5 351 aa12.81□□□□□ -0.36
TVP23B-202ENST00000476139 FAM162BQ5T6X4 162 aa12.81□□□□□ -0.36
TVP23B-202ENST00000476139 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.81□□□□□ -0.36
TVP23B-202ENST00000476139 BBC3Q96PG8 261 aaPredicted RBP12.81□□□□□ -0.36
TVP23B-202ENST00000476139 TCTAP57738 103 aa12.8□□□□□ -0.36
TVP23B-202ENST00000476139 ERASQ7Z444 233 aa12.8□□□□□ -0.36
TVP23B-202ENST00000476139 ZNF575Q86XF7 245 aa12.8□□□□□ -0.36
TVP23B-202ENST00000476139 CHCHD1Q96BP2 118 aaKnown RBP12.8□□□□□ -0.36
TVP23B-202ENST00000476139 TMEM189A5PLL7 270 aa12.8□□□□□ -0.36
TVP23B-202ENST00000476139 LOXL1Q08397 574 aaPredicted RBP12.8□□□□□ -0.36
TVP23B-202ENST00000476139 LCNL1Q6ZST4 164 aa12.8□□□□□ -0.36
TVP23B-202ENST00000476139 AMN1Q8IY45 258 aa12.8□□□□□ -0.36
TVP23B-202ENST00000476139 PRSS3P2Q8NHM4 247 aa12.8□□□□□ -0.36
TVP23B-202ENST00000476139 TMEM190Q8WZ59 177 aa12.8□□□□□ -0.36
TVP23B-202ENST00000476139 SAPCD1Q5SSQ6 148 aa12.79□□□□□ -0.36
TVP23B-202ENST00000476139 IFI27P40305 119 aaPredicted RBP12.79□□□□□ -0.36
TVP23B-202ENST00000476139 KLK15Q9H2R5 256 aa12.79□□□□□ -0.36
TVP23B-202ENST00000476139 SMKR1H3BMG3 65 aa12.78□□□□□ -0.36
TVP23B-202ENST00000476139 DMRTA1Q5VZB9 504 aa12.78□□□□□ -0.36
TVP23B-202ENST00000476139 MRPL52Q86TS9 123 aaKnown RBP12.78□□□□□ -0.36
TVP23B-202ENST00000476139 MAPK1IP1LQ8NDC0 245 aa12.78□□□□□ -0.36
TVP23B-202ENST00000476139 D6R8Y8 96 aa12.78□□□□□ -0.36
TVP23B-202ENST00000476139 UNQ9165/PRO28630Q6UXU0 137 aa12.78□□□□□ -0.36
TVP23B-202ENST00000476139 METTL26Q96S19 204 aa12.78□□□□□ -0.36
TVP23B-202ENST00000476139 SNAI2O43623 268 aa12.78□□□□□ -0.36
TVP23B-202ENST00000476139 IGHV3-11P01762 117 aa12.78□□□□□ -0.36
TVP23B-202ENST00000476139 AP5S1Q9NUS5 200 aa12.78□□□□□ -0.36
TVP23B-202ENST00000476139 MAP1LC3CQ9BXW4 147 aa12.77□□□□□ -0.36
TVP23B-202ENST00000476139 OR5AL1P0C617 328 aa12.77□□□□□ -0.37
TVP23B-202ENST00000476139 PPIFP30405 207 aaKnown RBP12.77□□□□□ -0.37
TVP23B-202ENST00000476139 TRAV8-2A0A0B4J237 113 aa12.76□□□□□ -0.37
TVP23B-202ENST00000476139 NCR2O95944 276 aa12.76□□□□□ -0.37
TVP23B-202ENST00000476139 FA2HQ7L5A8 372 aa12.76□□□□□ -0.37
TVP23B-202ENST00000476139 COX8CQ7Z4L0 72 aa12.76□□□□□ -0.37
TVP23B-202ENST00000476139 SPOCK3Q9BQ16 436 aa12.76□□□□□ -0.37
TVP23B-202ENST00000476139 ANKRD17O75179 2603 aaKnown RBP12.76□□□□□ -0.37
TVP23B-202ENST00000476139 A0A087X0K7 114 aa12.76□□□□□ -0.37
TVP23B-202ENST00000476139 A1L4Q6 167 aa12.76□□□□□ -0.37
TVP23B-202ENST00000476139 A6NDX4 124 aa12.76□□□□□ -0.37
TVP23B-202ENST00000476139 TCF21O43680 179 aa12.76□□□□□ -0.37
TVP23B-202ENST00000476139 IGF1P05019 195 aa12.76□□□□□ -0.37
TVP23B-202ENST00000476139 S100A7P31151 101 aa12.76□□□□□ -0.37
TVP23B-202ENST00000476139 RAB9AP51151 201 aa12.76□□□□□ -0.37
TVP23B-202ENST00000476139 IL17RELQ6ZVW7 336 aa12.76□□□□□ -0.37
TVP23B-202ENST00000476139 MSRB1Q9NZV6 116 aa12.76□□□□□ -0.37
TVP23B-202ENST00000476139 EPG5Q9HCE0 2579 aa12.76□□□□□ -0.37
TVP23B-202ENST00000476139 ARL3P36405 182 aa12.75□□□□□ -0.37
TVP23B-202ENST00000476139 ARL6IP6Q8N6S5 226 aa12.75□□□□□ -0.37
TVP23B-202ENST00000476139 SELENOKQ9Y6D0 94 aa12.75□□□□□ -0.37
TVP23B-202ENST00000476139 B4DSR2 109 aa12.75□□□□□ -0.37
TVP23B-202ENST00000476139 IGHG2P01859 326 aa12.75□□□□□ -0.37
TVP23B-202ENST00000476139 ORM1P02763 201 aa12.75□□□□□ -0.37
TVP23B-202ENST00000476139 PTPN13Q12923 2485 aa12.75□□□□□ -0.37
TVP23B-202ENST00000476139 C8orf86Q6ZUL3 223 aa12.75□□□□□ -0.37
TVP23B-202ENST00000476139 OR8A1Q8NGG7 326 aa12.75□□□□□ -0.37
TVP23B-202ENST00000476139 FAM223BA6NKX1 122 aa12.75□□□□□ -0.37
TVP23B-202ENST00000476139 CRXO43186 299 aaPredicted RBP12.75□□□□□ -0.37
TVP23B-202ENST00000476139 CRIP2P52943 208 aaPredicted RBP12.75□□□□□ -0.37
TVP23B-202ENST00000476139 TWIST1Q15672 202 aa12.75□□□□□ -0.37
TVP23B-202ENST00000476139 MPV17L2Q567V2 206 aa12.75□□□□□ -0.37
TVP23B-202ENST00000476139 FAM223AQ8IWN6 122 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms