RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 SLC25A4P12235 298 aa2.3□□□□□ -2.04
SMC5-203ENST00000475540 PCBD1P61457 104 aa2.3□□□□□ -2.04
SMC5-203ENST00000475540 SNRPD3P62318 126 aaKnown RBP2.3□□□□□ -2.04
SMC5-203ENST00000475540 ASB16-AS1Q495Z4 193 aa2.3□□□□□ -2.04
SMC5-203ENST00000475540 C1orf137Q5JT78 98 aa2.3□□□□□ -2.04
SMC5-203ENST00000475540 TEN1Q86WV5 123 aa2.3□□□□□ -2.04
SMC5-203ENST00000475540 OR5AS1Q8N127 324 aa2.3□□□□□ -2.04
SMC5-203ENST00000475540 TMEM106BQ9NUM4 274 aa2.3□□□□□ -2.04
SMC5-203ENST00000475540 CHCHD2Q9Y6H1 151 aaPredicted RBP2.3□□□□□ -2.04
SMC5-203ENST00000475540 POLEQ07864 2286 aa2.3□□□□□ -2.04
SMC5-203ENST00000475540 ZFHX2Q9C0A1 2572 aaPredicted RBP2.29□□□□□ -2.04
SMC5-203ENST00000475540 NPFFO15130 113 aa2.29□□□□□ -2.04
SMC5-203ENST00000475540 YPEL1O60688 119 aa2.29□□□□□ -2.04
SMC5-203ENST00000475540 CXCL8P10145 99 aa2.29□□□□□ -2.04
SMC5-203ENST00000475540 ZNF833PQ6ZTB9 187 aa2.29□□□□□ -2.04
SMC5-203ENST00000475540 COA5Q86WW8 74 aa2.29□□□□□ -2.04
SMC5-203ENST00000475540 PSMF1Q92530 271 aa2.29□□□□□ -2.04
SMC5-203ENST00000475540 CGREF1Q99674 301 aa2.29□□□□□ -2.04
SMC5-203ENST00000475540 NABP2Q9BQ15 211 aa2.29□□□□□ -2.04
SMC5-203ENST00000475540 CST11Q9H112 138 aa2.29□□□□□ -2.04
SMC5-203ENST00000475540 COMMD3Q9UBI1 195 aa2.29□□□□□ -2.04
SMC5-203ENST00000475540 METTL1Q9UBP6 276 aaKnown RBP2.29□□□□□ -2.04
SMC5-203ENST00000475540 PLXNA3P51805 1871 aa2.28□□□□□ -2.04
SMC5-203ENST00000475540 COL4A5P29400 1685 aa2.28□□□□□ -2.04
SMC5-203ENST00000475540 C5orf67F2Z3F1 127 aa2.28□□□□□ -2.04
SMC5-203ENST00000475540 RRAS2P62070 204 aaPredicted RBP2.28□□□□□ -2.04
SMC5-203ENST00000475540 C10orf55Q5SWW7 151 aa2.28□□□□□ -2.04
SMC5-203ENST00000475540 Q96M85 177 aa2.28□□□□□ -2.04
SMC5-203ENST00000475540 LINC00470Q9BZP3 86 aa2.28□□□□□ -2.04
SMC5-203ENST00000475540 COL11A1P12107 1806 aaPredicted RBP2.28□□□□□ -2.04
SMC5-203ENST00000475540 STRCP1A6NGW2 1772 aa2.28□□□□□ -2.04
SMC5-203ENST00000475540 SYNJ1O43426 1573 aa2.27□□□□□ -2.05
SMC5-203ENST00000475540 ARHGAP31Q2M1Z3 1444 aa2.27□□□□□ -2.05
SMC5-203ENST00000475540 CDK5RAP2Q96SN8 1893 aa2.27□□□□□ -2.05
SMC5-203ENST00000475540 A0A1B0GV90 55 aa2.27□□□□□ -2.05
SMC5-203ENST00000475540 FAM92AA1XBS5 289 aa2.27□□□□□ -2.05
SMC5-203ENST00000475540 C9orf170A2RU37 121 aa2.27□□□□□ -2.05
SMC5-203ENST00000475540 HYPMO75409 117 aa2.27□□□□□ -2.05
SMC5-203ENST00000475540 CD2P06729 351 aa2.27□□□□□ -2.05
SMC5-203ENST00000475540 CKS2P33552 79 aa2.27□□□□□ -2.05
SMC5-203ENST00000475540 LINC00269Q8N2A0 174 aa2.27□□□□□ -2.05
SMC5-203ENST00000475540 SLC35B3Q9H1N7 401 aa2.27□□□□□ -2.05
SMC5-203ENST00000475540 DNAJC15Q9Y5T4 150 aa2.27□□□□□ -2.05
SMC5-203ENST00000475540 UNC79Q9P2D8 2635 aa2.26□□□□□ -2.05
SMC5-203ENST00000475540 C3orf85A0A1B0GTC6 90 aa2.26□□□□□ -2.05
SMC5-203ENST00000475540 FAM236AA0A1B0GUQ0 79 aa2.26□□□□□ -2.05
SMC5-203ENST00000475540 FAM236BA0A1B0GV22 79 aa2.26□□□□□ -2.05
SMC5-203ENST00000475540 ZNF670-ZNF695F2Z2N8 137 aa2.26□□□□□ -2.05
SMC5-203ENST00000475540 DLEU1O43261 78 aa2.26□□□□□ -2.05
SMC5-203ENST00000475540 RBP4P02753 201 aa2.26□□□□□ -2.05
SMC5-203ENST00000475540 EMX2Q04743 252 aa2.26□□□□□ -2.05
SMC5-203ENST00000475540 NEDD8Q15843 81 aa2.26□□□□□ -2.05
SMC5-203ENST00000475540 CASC2Q6XLA1 102 aa2.26□□□□□ -2.05
SMC5-203ENST00000475540 C10orf111Q8N326 155 aa2.26□□□□□ -2.05
SMC5-203ENST00000475540 OTOSQ8NHW6 89 aa2.26□□□□□ -2.05
SMC5-203ENST00000475540 Q8TAT8 98 aa2.26□□□□□ -2.05
SMC5-203ENST00000475540 C2orf88Q9BSF0 95 aa2.26□□□□□ -2.05
SMC5-203ENST00000475540 MPC1Q9Y5U8 109 aa2.26□□□□□ -2.05
SMC5-203ENST00000475540 BRWD1Q9NSI6 2320 aa2.25□□□□□ -2.05
SMC5-203ENST00000475540 USP54Q70EL1 1684 aa2.25□□□□□ -2.05
SMC5-203ENST00000475540 TRBV6-8A0A0A6YYG3 113 aa2.25□□□□□ -2.05
SMC5-203ENST00000475540 TRBV6-5A0A0K0K1A5 114 aa2.25□□□□□ -2.05
SMC5-203ENST00000475540 FAM25AB3EWG3 89 aa2.25□□□□□ -2.05
SMC5-203ENST00000475540 FAM25CB3EWG5 89 aa2.25□□□□□ -2.05
SMC5-203ENST00000475540 FAM25GB3EWG6 89 aa2.25□□□□□ -2.05
SMC5-203ENST00000475540 GNG7O60262 68 aa2.25□□□□□ -2.05
SMC5-203ENST00000475540 CD3DP04234 171 aa2.25□□□□□ -2.05
SMC5-203ENST00000475540 PLGLB1Q02325 96 aa2.25□□□□□ -2.05
SMC5-203ENST00000475540 GKN2Q86XP6 184 aa2.25□□□□□ -2.05
SMC5-203ENST00000475540 ATOH7Q8N100 152 aa2.25□□□□□ -2.05
SMC5-203ENST00000475540 CIB3Q96Q77 187 aaPredicted RBP2.25□□□□□ -2.05
SMC5-203ENST00000475540 TMEM191AQ9H0A3 160 aa2.25□□□□□ -2.05
SMC5-203ENST00000475540 GRIN2AQ12879 1464 aa2.25□□□□□ -2.05
SMC5-203ENST00000475540 COL24A1Q17RW2 1714 aa2.25□□□□□ -2.05
SMC5-203ENST00000475540 MYOM3Q5VTT5 1437 aa2.25□□□□□ -2.05
SMC5-203ENST00000475540 MGAMO43451 1857 aa2.24□□□□□ -2.05
SMC5-203ENST00000475540 MDC1Q14676 2089 aaKnown RBP2.24□□□□□ -2.05
SMC5-203ENST00000475540 IFITM5A6NNB3 132 aa2.24□□□□□ -2.05
SMC5-203ENST00000475540 LINC00587B1AMM8 73 aa2.24□□□□□ -2.05
SMC5-203ENST00000475540 ZNF736B4DX44 427 aaPredicted RBP2.24□□□□□ -2.05
SMC5-203ENST00000475540 APOC1P02654 83 aa2.24□□□□□ -2.05
SMC5-203ENST00000475540 CD14P08571 375 aa2.24□□□□□ -2.05
SMC5-203ENST00000475540 GUCA1AP43080 201 aaPredicted RBP2.24□□□□□ -2.05
SMC5-203ENST00000475540 CNBPP62633 177 aaKnown RBP2.24□□□□□ -2.05
SMC5-203ENST00000475540 CCSMST1Q4G0I0 132 aa2.24□□□□□ -2.05
SMC5-203ENST00000475540 CLLU1Q5K131 121 aa2.24□□□□□ -2.05
SMC5-203ENST00000475540 KRTAP26-1Q6PEX3 210 aa2.24□□□□□ -2.05
SMC5-203ENST00000475540 IZUMO2Q6UXV1 221 aa2.24□□□□□ -2.05
SMC5-203ENST00000475540 FAM19A2Q8N3H0 131 aa2.24□□□□□ -2.05
SMC5-203ENST00000475540 OR10AG1Q8NH19 301 aa2.24□□□□□ -2.05
SMC5-203ENST00000475540 SMIM7Q9BQ49 75 aa2.24□□□□□ -2.05
SMC5-203ENST00000475540 SAR1AQ9NR31 198 aa2.24□□□□□ -2.05
SMC5-203ENST00000475540 SMG6Q86US8 1419 aaKnown RBP2.24□□□□□ -2.05
SMC5-203ENST00000475540 HEATR5BQ9P2D3 2071 aa2.24□□□□□ -2.05
SMC5-203ENST00000475540 ROCK2O75116 1388 aaKnown RBP2.23□□□□□ -2.05
SMC5-203ENST00000475540 IBTKQ9P2D0 1353 aaPredicted RBP2.23□□□□□ -2.05
SMC5-203ENST00000475540 TMEM2Q9UHN6 1383 aa2.23□□□□□ -2.05
SMC5-203ENST00000475540 TRBV20-1A0A075B6N2 111 aa2.23□□□□□ -2.05
SMC5-203ENST00000475540 IGHV1-24A0A0C4DH33 117 aa2.23□□□□□ -2.05
SMC5-203ENST00000475540 EDF1O60869 148 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 205.5 ms