RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 NDUFS7O75251 213 aa16.42■□□□□ 0.22
COL18A1-207ENST00000473212 ODF3BA8MYP8 253 aa16.41■□□□□ 0.22
COL18A1-207ENST00000473212 COX8CQ7Z4L0 72 aa16.41■□□□□ 0.22
COL18A1-207ENST00000473212 ZNF48Q96MX3 618 aaPredicted RBP16.41■□□□□ 0.22
COL18A1-207ENST00000473212 MSRB1Q9NZV6 116 aa16.41■□□□□ 0.22
COL18A1-207ENST00000473212 SMAD5-AS1Q9Y6J3 95 aa16.41■□□□□ 0.22
COL18A1-207ENST00000473212 MAP1AP78559 2803 aaPredicted RBP16.41■□□□□ 0.22
COL18A1-207ENST00000473212 ZNF562Q6V9R5 426 aa16.41■□□□□ 0.22
COL18A1-207ENST00000473212 ZNF575Q86XF7 245 aa16.41■□□□□ 0.22
COL18A1-207ENST00000473212 SMAD7O15105 426 aaKnown RBP16.4■□□□□ 0.22
COL18A1-207ENST00000473212 IGHG4P01861 327 aa16.4■□□□□ 0.22
COL18A1-207ENST00000473212 PPBPP02775 128 aa16.4■□□□□ 0.22
COL18A1-207ENST00000473212 VPS25Q9BRG1 176 aa16.4■□□□□ 0.22
COL18A1-207ENST00000473212 TTC9CQ8N5M4 171 aa16.4■□□□□ 0.22
COL18A1-207ENST00000473212 SPTAN1Q13813 2472 aaKnown RBP16.39■□□□□ 0.21
COL18A1-207ENST00000473212 IGLC6P0CF74 106 aa16.39■□□□□ 0.21
COL18A1-207ENST00000473212 ZFP36P26651 326 aaKnown RBP16.39■□□□□ 0.21
COL18A1-207ENST00000473212 BMI1P35226 326 aa16.39■□□□□ 0.21
COL18A1-207ENST00000473212 DKK2Q9UBU2 259 aa16.39■□□□□ 0.21
COL18A1-207ENST00000473212 HIVEP3Q5T1R4 2406 aa16.39■□□□□ 0.21
COL18A1-207ENST00000473212 A1L4Q6 167 aa16.39■□□□□ 0.21
COL18A1-207ENST00000473212 GAGE10A6NGK3 116 aa16.39■□□□□ 0.21
COL18A1-207ENST00000473212 ORM1P02763 201 aa16.39■□□□□ 0.21
COL18A1-207ENST00000473212 NMUP48645 174 aa16.39■□□□□ 0.21
COL18A1-207ENST00000473212 VMO1Q7Z5L0 202 aa16.39■□□□□ 0.21
COL18A1-207ENST00000473212 PCP2Q8IVA1 136 aa16.39■□□□□ 0.21
COL18A1-207ENST00000473212 C18orf15Q96N68 181 aa16.39■□□□□ 0.21
COL18A1-207ENST00000473212 NAA38Q9BRA0 125 aaKnown RBP16.39■□□□□ 0.21
COL18A1-207ENST00000473212 COL25A1Q9BXS0 654 aaPredicted RBP16.39■□□□□ 0.21
COL18A1-207ENST00000473212 SELENOKQ9Y6D0 94 aa16.39■□□□□ 0.21
COL18A1-207ENST00000473212 NCOR2Q9Y618 2525 aa16.38■□□□□ 0.21
COL18A1-207ENST00000473212 SPTBN4Q9H254 2564 aa16.38■□□□□ 0.21
COL18A1-207ENST00000473212 GAS8-AS1O95177 125 aa16.38■□□□□ 0.21
COL18A1-207ENST00000473212 CTSGP08311 255 aa16.38■□□□□ 0.21
COL18A1-207ENST00000473212 PRTN3P24158 256 aa16.38■□□□□ 0.21
COL18A1-207ENST00000473212 ADORA2A-AS1P86434 159 aa16.38■□□□□ 0.21
COL18A1-207ENST00000473212 PRSS57Q6UWY2 283 aa16.38■□□□□ 0.21
COL18A1-207ENST00000473212 CHD8Q9HCK8 2581 aa16.38■□□□□ 0.21
COL18A1-207ENST00000473212 IGHV3OR16-13A0A075B7E8 117 aa16.37■□□□□ 0.21
COL18A1-207ENST00000473212 IGHV3-74A0A0B4J1X5 117 aa16.37■□□□□ 0.21
COL18A1-207ENST00000473212 IGHV3-66A0A0C4DH42 116 aa16.37■□□□□ 0.21
COL18A1-207ENST00000473212 A6NDN8 102 aa16.37■□□□□ 0.21
COL18A1-207ENST00000473212 JMJD8Q96S16 334 aa16.37■□□□□ 0.21
COL18A1-207ENST00000473212 A0A1W2PPR1 153 aa16.37■□□□□ 0.21
COL18A1-207ENST00000473212 ERCC8Q13216 396 aa16.37■□□□□ 0.21
COL18A1-207ENST00000473212 RNF185Q96GF1 192 aa16.37■□□□□ 0.21
COL18A1-207ENST00000473212 AP1S3Q96PC3 154 aa16.37■□□□□ 0.21
COL18A1-207ENST00000473212 H3BRM9 83 aa16.36■□□□□ 0.21
COL18A1-207ENST00000473212 HSD52Q0P140 79 aa16.36■□□□□ 0.21
COL18A1-207ENST00000473212 KIR3DS1Q14943 382 aa16.36■□□□□ 0.21
COL18A1-207ENST00000473212 OR9G4Q8NGQ1 327 aa16.36■□□□□ 0.21
COL18A1-207ENST00000473212 C9orf118A6NHY6 69 aa16.36■□□□□ 0.21
COL18A1-207ENST00000473212 H3BUT2 72 aa16.36■□□□□ 0.21
COL18A1-207ENST00000473212 ADAMTSL5Q6ZMM2 481 aa16.36■□□□□ 0.21
COL18A1-207ENST00000473212 PRAC2D3DTV9 90 aa16.35■□□□□ 0.21
COL18A1-207ENST00000473212 TIMD4Q96H15 378 aa16.35■□□□□ 0.21
COL18A1-207ENST00000473212 IGHV7-81A0A0B4J1V7 117 aa16.35■□□□□ 0.21
COL18A1-207ENST00000473212 RNF182Q8N6D2 247 aa16.35■□□□□ 0.21
COL18A1-207ENST00000473212 ARL6IP6Q8N6S5 226 aa16.35■□□□□ 0.21
COL18A1-207ENST00000473212 MAP1LC3AQ9H492 121 aa16.35■□□□□ 0.21
COL18A1-207ENST00000473212 FBLL1A6NHQ2 334 aaKnown RBP16.34■□□□□ 0.21
COL18A1-207ENST00000473212 M0R1W7 72 aa16.34■□□□□ 0.21
COL18A1-207ENST00000473212 PPIFP30405 207 aaKnown RBP16.34■□□□□ 0.21
COL18A1-207ENST00000473212 COTL1Q14019 142 aa16.34■□□□□ 0.21
COL18A1-207ENST00000473212 RAB37Q96AX2 223 aa16.34■□□□□ 0.21
COL18A1-207ENST00000473212 EVI2AP22794 236 aa16.34■□□□□ 0.21
COL18A1-207ENST00000473212 UFSP1Q6NVU6 142 aa16.34■□□□□ 0.21
COL18A1-207ENST00000473212 SIVA1O15304 175 aa16.33■□□□□ 0.2
COL18A1-207ENST00000473212 FBXL19-AS1Q494R0 122 aa16.33■□□□□ 0.2
COL18A1-207ENST00000473212 C11orf71Q6IPW1 123 aa16.33■□□□□ 0.2
COL18A1-207ENST00000473212 IGHV3-49A0A0A0MS15 119 aa16.33■□□□□ 0.2
COL18A1-207ENST00000473212 FABP5P3A8MUU1 101 aa16.33■□□□□ 0.2
COL18A1-207ENST00000473212 TMEM11P17152 192 aa16.33■□□□□ 0.2
COL18A1-207ENST00000473212 LEPP41159 167 aa16.33■□□□□ 0.2
COL18A1-207ENST00000473212 ECSCRQ19T08 205 aa16.33■□□□□ 0.2
COL18A1-207ENST00000473212 Q8N6K4 173 aa16.33■□□□□ 0.2
COL18A1-207ENST00000473212 OR4X2Q8NGF9 303 aa16.33■□□□□ 0.2
COL18A1-207ENST00000473212 PSMG3-AS1Q96PY0 264 aa16.33■□□□□ 0.2
COL18A1-207ENST00000473212 LINC01548A6NM66 108 aa16.32■□□□□ 0.2
COL18A1-207ENST00000473212 GATA1P15976 413 aaPredicted RBP16.32■□□□□ 0.2
COL18A1-207ENST00000473212 GTF2H5Q6ZYL4 71 aa16.32■□□□□ 0.2
COL18A1-207ENST00000473212 MSRB2Q9Y3D2 182 aa16.32■□□□□ 0.2
COL18A1-207ENST00000473212 A0A0G2JLM5 398 aa16.31■□□□□ 0.2
COL18A1-207ENST00000473212 K7ERU9 68 aa16.3■□□□□ 0.2
COL18A1-207ENST00000473212 SAP30O75446 220 aa16.3■□□□□ 0.2
COL18A1-207ENST00000473212 SCGB2A1O75556 95 aa16.3■□□□□ 0.2
COL18A1-207ENST00000473212 TNFRSF6BO95407 300 aa16.3■□□□□ 0.2
COL18A1-207ENST00000473212 TM4SF20Q53R12 229 aa16.3■□□□□ 0.2
COL18A1-207ENST00000473212 CCDC144NLQ6NUI1 221 aa16.3■□□□□ 0.2
COL18A1-207ENST00000473212 CNFNQ9BYD5 112 aa16.3■□□□□ 0.2
COL18A1-207ENST00000473212 Q8N9W7 124 aa16.3■□□□□ 0.2
COL18A1-207ENST00000473212 SRSF2Q01130 221 aaKnown RBP16.29■□□□□ 0.2
COL18A1-207ENST00000473212 C15orf32Q32M92 178 aa16.29■□□□□ 0.2
COL18A1-207ENST00000473212 Q6ZQT7 251 aa16.29■□□□□ 0.2
COL18A1-207ENST00000473212 IL17RELQ6ZVW7 336 aa16.29■□□□□ 0.2
COL18A1-207ENST00000473212 NPFFR1Q9GZQ6 430 aa16.29■□□□□ 0.2
COL18A1-207ENST00000473212 G3V318 75 aa16.29■□□□□ 0.2
COL18A1-207ENST00000473212 ZNF207O43670 478 aaKnown RBP16.29■□□□□ 0.2
COL18A1-207ENST00000473212 FCER1GP30273 86 aa16.29■□□□□ 0.2
COL18A1-207ENST00000473212 TTTY13Q9BZ97 58 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms