RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 PIK3C2AO00443 1686 aa-1.2□□□□□ -2.6
PRPF40A-207ENST00000471701 TRGC2P03986 189 aa-1.2□□□□□ -2.6
PRPF40A-207ENST00000471701 MPC1LP0DKB6 136 aa-1.2□□□□□ -2.6
PRPF40A-207ENST00000471701 LIN52Q52LA3 116 aa-1.2□□□□□ -2.6
PRPF40A-207ENST00000471701 ALMS1Q8TCU4 4167 aa-1.2□□□□□ -2.6
PRPF40A-207ENST00000471701 PTPN13Q12923 2485 aa-1.2□□□□□ -2.6
PRPF40A-207ENST00000471701 RREB1Q92766 1687 aa-1.2□□□□□ -2.6
PRPF40A-207ENST00000471701 SOGA1O94964 1423 aa-1.21□□□□□ -2.6
PRPF40A-207ENST00000471701 CD109Q6YHK3 1445 aa-1.21□□□□□ -2.6
PRPF40A-207ENST00000471701 NCALDP61601 193 aa-1.21□□□□□ -2.6
PRPF40A-207ENST00000471701 POU6F1Q14863 301 aa-1.21□□□□□ -2.6
PRPF40A-207ENST00000471701 KRTAP19-7Q3SYF9 63 aa-1.21□□□□□ -2.6
PRPF40A-207ENST00000471701 OR8J2Q8NGG1 315 aa-1.21□□□□□ -2.6
PRPF40A-207ENST00000471701 BTF3L4Q96K17 158 aa-1.21□□□□□ -2.6
PRPF40A-207ENST00000471701 OR4C12Q96R67 309 aa-1.21□□□□□ -2.6
PRPF40A-207ENST00000471701 GPX7Q96SL4 187 aaPredicted RBP-1.21□□□□□ -2.6
PRPF40A-207ENST00000471701 PRR15LQ9BU68 103 aa-1.21□□□□□ -2.6
PRPF40A-207ENST00000471701 OR2J1Q9GZK6 312 aa-1.21□□□□□ -2.6
PRPF40A-207ENST00000471701 NMNAT1Q9HAN9 279 aaPredicted RBP-1.21□□□□□ -2.6
PRPF40A-207ENST00000471701 TPRKBQ9Y3C4 175 aa-1.21□□□□□ -2.6
PRPF40A-207ENST00000471701 USP54Q70EL1 1684 aa-1.21□□□□□ -2.6
PRPF40A-207ENST00000471701 TNS1Q9HBL0 1735 aaKnown RBP-1.21□□□□□ -2.6
PRPF40A-207ENST00000471701 TRAV5A0A0B4J249 113 aa-1.22□□□□□ -2.6
PRPF40A-207ENST00000471701 C3orf85A0A1B0GTC6 90 aa-1.22□□□□□ -2.6
PRPF40A-207ENST00000471701 CST7O76096 145 aa-1.22□□□□□ -2.6
PRPF40A-207ENST00000471701 SPRR2DP22532 72 aa-1.22□□□□□ -2.6
PRPF40A-207ENST00000471701 KLKP1Q107X0 134 aa-1.22□□□□□ -2.6
PRPF40A-207ENST00000471701 IDO2Q6ZQW0 420 aa-1.22□□□□□ -2.6
PRPF40A-207ENST00000471701 PCF11O94913 1555 aaKnown RBP-1.22□□□□□ -2.61
PRPF40A-207ENST00000471701 ADCY9O60503 1353 aa-1.22□□□□□ -2.61
PRPF40A-207ENST00000471701 TMEM114B3SHH9 223 aa-1.23□□□□□ -2.61
PRPF40A-207ENST00000471701 CEBPGP53567 150 aa-1.23□□□□□ -2.61
PRPF40A-207ENST00000471701 MRPL36Q9P0J6 103 aaKnown RBP-1.23□□□□□ -2.61
PRPF40A-207ENST00000471701 LAMC3Q9Y6N6 1575 aa-1.23□□□□□ -2.61
PRPF40A-207ENST00000471701 MYO7AQ13402 2215 aa-1.23□□□□□ -2.61
PRPF40A-207ENST00000471701 TENM2Q9NT68 2774 aa-1.24□□□□□ -2.61
PRPF40A-207ENST00000471701 CADP27708 2225 aa-1.24□□□□□ -2.61
PRPF40A-207ENST00000471701 IGF2P01344 180 aa-1.24□□□□□ -2.61
PRPF40A-207ENST00000471701 HSPE1P61604 102 aaKnown RBP-1.24□□□□□ -2.61
PRPF40A-207ENST00000471701 HBBP68871 147 aa-1.24□□□□□ -2.61
PRPF40A-207ENST00000471701 SREK1IP1Q8N9Q2 155 aaPredicted RBP-1.24□□□□□ -2.61
PRPF40A-207ENST00000471701 BSNQ9UPA5 3926 aa-1.24□□□□□ -2.61
PRPF40A-207ENST00000471701 CAMSAP2Q08AD1 1489 aa-1.24□□□□□ -2.61
PRPF40A-207ENST00000471701 HIGD1CA8MV81 97 aa-1.25□□□□□ -2.61
PRPF40A-207ENST00000471701 IFNA14P01570 189 aa-1.25□□□□□ -2.61
PRPF40A-207ENST00000471701 MT-ND6P03923 174 aa-1.25□□□□□ -2.61
PRPF40A-207ENST00000471701 FABP4P15090 132 aa-1.25□□□□□ -2.61
PRPF40A-207ENST00000471701 IZUMO2Q6UXV1 221 aa-1.25□□□□□ -2.61
PRPF40A-207ENST00000471701 C3orf62Q6ZUJ4 267 aa-1.25□□□□□ -2.61
PRPF40A-207ENST00000471701 TAF9BQ9HBM6 251 aa-1.25□□□□□ -2.61
PRPF40A-207ENST00000471701 BIN3Q9NQY0 253 aa-1.25□□□□□ -2.61
PRPF40A-207ENST00000471701 COMMD3Q9UBI1 195 aa-1.25□□□□□ -2.61
PRPF40A-207ENST00000471701 CPDO75976 1380 aa-1.25□□□□□ -2.61
PRPF40A-207ENST00000471701 RTL9Q8NET4 1388 aa-1.25□□□□□ -2.61
PRPF40A-207ENST00000471701 UHRF1BP1Q6BDS2 1440 aa-1.25□□□□□ -2.61
PRPF40A-207ENST00000471701 CDK12Q9NYV4 1490 aaPredicted RBP-1.25□□□□□ -2.61
PRPF40A-207ENST00000471701 SIPA1L2Q9P2F8 1722 aaPredicted RBP-1.26□□□□□ -2.61
PRPF40A-207ENST00000471701 A0A1W2PPB8 328 aa-1.26□□□□□ -2.61
PRPF40A-207ENST00000471701 KIR3DP1A8MWS1 328 aa-1.26□□□□□ -2.61
PRPF40A-207ENST00000471701 ATP5HO75947 161 aa-1.26□□□□□ -2.61
PRPF40A-207ENST00000471701 TCTEX1D1Q8N7M0 179 aa-1.26□□□□□ -2.61
PRPF40A-207ENST00000471701 CCL4L1Q8NHW4 92 aa-1.26□□□□□ -2.61
PRPF40A-207ENST00000471701 NAT14Q8WUY8 206 aa-1.26□□□□□ -2.61
PRPF40A-207ENST00000471701 PRAP1Q96NZ9 151 aa-1.26□□□□□ -2.61
PRPF40A-207ENST00000471701 C9orf16Q9BUW7 83 aa-1.26□□□□□ -2.61
PRPF40A-207ENST00000471701 KIAA1107Q9UPP5 1409 aa-1.26□□□□□ -2.61
PRPF40A-207ENST00000471701 ZNF292O60281 2723 aa-1.27□□□□□ -2.61
PRPF40A-207ENST00000471701 PDZD2O15018 2839 aa-1.27□□□□□ -2.61
PRPF40A-207ENST00000471701 NDUFC2O95298 119 aa-1.27□□□□□ -2.61
PRPF40A-207ENST00000471701 RPL35P42766 123 aaKnown RBP-1.27□□□□□ -2.61
PRPF40A-207ENST00000471701 FKBP1CQ5VVH2 108 aa-1.27□□□□□ -2.61
PRPF40A-207ENST00000471701 PTRHD1Q6GMV3 140 aaKnown RBP-1.27□□□□□ -2.61
PRPF40A-207ENST00000471701 OR5AK2Q8NH90 309 aa-1.27□□□□□ -2.61
PRPF40A-207ENST00000471701 CIB3Q96Q77 187 aaPredicted RBP-1.27□□□□□ -2.61
PRPF40A-207ENST00000471701 PAIP2Q9BPZ3 127 aaKnown RBP-1.27□□□□□ -2.61
PRPF40A-207ENST00000471701 FGD6Q6ZV73 1430 aa-1.27□□□□□ -2.61
PRPF40A-207ENST00000471701 DLEC1Q9Y238 1755 aa-1.28□□□□□ -2.61
PRPF40A-207ENST00000471701 PLB1Q6P1J6 1458 aa-1.28□□□□□ -2.61
PRPF40A-207ENST00000471701 BBIP1A8MTZ0 92 aa-1.28□□□□□ -2.61
PRPF40A-207ENST00000471701 CFDP00746 253 aaPredicted RBP-1.28□□□□□ -2.61
PRPF40A-207ENST00000471701 IGKCP01834 107 aa-1.28□□□□□ -2.61
PRPF40A-207ENST00000471701 CST2P09228 141 aa-1.28□□□□□ -2.61
PRPF40A-207ENST00000471701 OGNP20774 298 aaKnown RBP-1.28□□□□□ -2.61
PRPF40A-207ENST00000471701 GNG5P63218 68 aa-1.28□□□□□ -2.61
PRPF40A-207ENST00000471701 CCL7P80098 99 aa-1.28□□□□□ -2.61
PRPF40A-207ENST00000471701 ITGB3BPQ13352 177 aaPredicted RBP-1.28□□□□□ -2.61
PRPF40A-207ENST00000471701 C1orf140Q5VVS0 124 aa-1.28□□□□□ -2.61
PRPF40A-207ENST00000471701 Q5XG85 94 aa-1.28□□□□□ -2.61
PRPF40A-207ENST00000471701 PHF5AQ7RTV0 110 aaKnown RBP-1.28□□□□□ -2.61
PRPF40A-207ENST00000471701 ISOC1Q96CN7 298 aa-1.28□□□□□ -2.61
PRPF40A-207ENST00000471701 DSCR8Q96T75 97 aa-1.28□□□□□ -2.61
PRPF40A-207ENST00000471701 OR2H1Q9GZK4 316 aa-1.28□□□□□ -2.61
PRPF40A-207ENST00000471701 BLMP54132 1417 aaPredicted RBP-1.29□□□□□ -2.62
PRPF40A-207ENST00000471701 MED13LQ71F56 2210 aa-1.29□□□□□ -2.62
PRPF40A-207ENST00000471701 SERPINA1P01009 418 aa-1.29□□□□□ -2.62
PRPF40A-207ENST00000471701 TRACP01848 142 aa-1.29□□□□□ -2.62
PRPF40A-207ENST00000471701 NMBP08949 121 aa-1.29□□□□□ -2.62
PRPF40A-207ENST00000471701 SNCBQ16143 134 aa-1.29□□□□□ -2.62
PRPF40A-207ENST00000471701 AKIRIN2Q53H80 203 aa-1.29□□□□□ -2.62
PRPF40A-207ENST00000471701 TMEM229BQ8NBD8 167 aa-1.29□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms