RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 NDUFB4O95168 129 aa9.35□□□□□ -0.91
CHD3-207ENST00000466233 TCL1AP56279 114 aa9.35□□□□□ -0.91
CHD3-207ENST00000466233 AAMDCQ9H7C9 122 aa9.35□□□□□ -0.91
CHD3-207ENST00000466233 TRGV2A0A075B6R0 118 aa9.34□□□□□ -0.91
CHD3-207ENST00000466233 A0A096LPF7 62 aa9.34□□□□□ -0.91
CHD3-207ENST00000466233 A0A0J9YY99 117 aa9.34□□□□□ -0.91
CHD3-207ENST00000466233 H3BTX0 84 aa9.34□□□□□ -0.91
CHD3-207ENST00000466233 CCSO14618 274 aa9.34□□□□□ -0.91
CHD3-207ENST00000466233 SNRPCP09234 159 aaKnown RBP9.34□□□□□ -0.91
CHD3-207ENST00000466233 BAXQ07812 192 aa9.34□□□□□ -0.91
CHD3-207ENST00000466233 Q6ZTI0 123 aa9.34□□□□□ -0.91
CHD3-207ENST00000466233 Q8N1X5 172 aa9.34□□□□□ -0.91
CHD3-207ENST00000466233 VSIG2Q96IQ7 327 aa9.34□□□□□ -0.91
CHD3-207ENST00000466233 PARD6GQ9BYG4 376 aaPredicted RBP9.34□□□□□ -0.91
CHD3-207ENST00000466233 KRTAP4-5Q9BYR2 181 aa9.34□□□□□ -0.91
CHD3-207ENST00000466233 KRTAP1-5Q9BYS1 174 aa9.34□□□□□ -0.91
CHD3-207ENST00000466233 AGPAT4-IT1Q9H0P7 198 aa9.34□□□□□ -0.91
CHD3-207ENST00000466233 TMPRSS5Q9H3S3 457 aa9.34□□□□□ -0.91
CHD3-207ENST00000466233 KCNIP2Q9NS61 270 aa9.34□□□□□ -0.91
CHD3-207ENST00000466233 TIMM9Q9Y5J7 89 aa9.34□□□□□ -0.91
CHD3-207ENST00000466233 TRAV6A0A075B6T7 132 aa9.33□□□□□ -0.92
CHD3-207ENST00000466233 UBE2L5PA0A1B0GUS4 154 aa9.33□□□□□ -0.92
CHD3-207ENST00000466233 SPATA12Q7Z6I5 190 aa9.33□□□□□ -0.92
CHD3-207ENST00000466233 MAPKAPK5-AS1Q8N8E1 139 aa9.33□□□□□ -0.92
CHD3-207ENST00000466233 ST6GAL2Q96JF0 529 aa9.33□□□□□ -0.92
CHD3-207ENST00000466233 NPCDR1Q9BY65 106 aa9.33□□□□□ -0.92
CHD3-207ENST00000466233 GSN-AS1Q9NRJ2 163 aa9.33□□□□□ -0.92
CHD3-207ENST00000466233 FUT9Q9Y231 359 aa9.33□□□□□ -0.92
CHD3-207ENST00000466233 IGSF23A1L1A6 192 aa9.32□□□□□ -0.92
CHD3-207ENST00000466233 RBAKDNA6NC62 111 aa9.32□□□□□ -0.92
CHD3-207ENST00000466233 M0R3E3 92 aa9.32□□□□□ -0.92
CHD3-207ENST00000466233 GPX1P07203 203 aa9.32□□□□□ -0.92
CHD3-207ENST00000466233 H2AFB2P0C5Z0 115 aa9.32□□□□□ -0.92
CHD3-207ENST00000466233 FGF7P21781 194 aa9.32□□□□□ -0.92
CHD3-207ENST00000466233 RAB32Q13637 225 aa9.32□□□□□ -0.92
CHD3-207ENST00000466233 TMEM78Q5T7P6 136 aa9.32□□□□□ -0.92
CHD3-207ENST00000466233 LYPD1Q8N2G4 141 aa9.32□□□□□ -0.92
CHD3-207ENST00000466233 VGLL1Q99990 258 aa9.32□□□□□ -0.92
CHD3-207ENST00000466233 MRPL32Q9BYC8 188 aaKnown RBP9.32□□□□□ -0.92
CHD3-207ENST00000466233 SLC25A31Q9H0C2 315 aa9.32□□□□□ -0.92
CHD3-207ENST00000466233 PGPEP1Q9NXJ5 209 aa9.32□□□□□ -0.92
CHD3-207ENST00000466233 ZNF492Q9P255 531 aa9.32□□□□□ -0.92
CHD3-207ENST00000466233 PRO0255Q9UI72 69 aa9.32□□□□□ -0.92
CHD3-207ENST00000466233 TP53TG3Q9ULZ0 132 aa9.32□□□□□ -0.92
CHD3-207ENST00000466233 SIVA1O15304 175 aa9.31□□□□□ -0.92
CHD3-207ENST00000466233 NBEAP1P0C6P0 100 aa9.31□□□□□ -0.92
CHD3-207ENST00000466233 S100A10P60903 97 aa9.31□□□□□ -0.92
CHD3-207ENST00000466233 CD300CQ08708 224 aa9.31□□□□□ -0.92
CHD3-207ENST00000466233 CDPF1Q6NVV7 123 aa9.31□□□□□ -0.92
CHD3-207ENST00000466233 MZT2BQ6NZ67 158 aa9.31□□□□□ -0.92
CHD3-207ENST00000466233 IQCF2Q8IXL9 164 aa9.31□□□□□ -0.92
CHD3-207ENST00000466233 ZFAND2AQ8N6M9 145 aa9.31□□□□□ -0.92
CHD3-207ENST00000466233 FAM167A-AS1Q96KT0 104 aa9.31□□□□□ -0.92
CHD3-207ENST00000466233 SEC22CQ9BRL7 303 aa9.31□□□□□ -0.92
CHD3-207ENST00000466233 KLF12Q9Y4X4 402 aa9.31□□□□□ -0.92
CHD3-207ENST00000466233 LENEPQ9Y5L5 61 aa9.31□□□□□ -0.92
CHD3-207ENST00000466233 ICOSQ9Y6W8 199 aa9.31□□□□□ -0.92
CHD3-207ENST00000466233 TRGV1A0A0A0MS02 117 aa9.3□□□□□ -0.92
CHD3-207ENST00000466233 FAM240BA0A1B0GVZ2 78 aa9.3□□□□□ -0.92
CHD3-207ENST00000466233 E5RGE8 158 aa9.3□□□□□ -0.92
CHD3-207ENST00000466233 J3KRW8 73 aa9.3□□□□□ -0.92
CHD3-207ENST00000466233 RGS13O14921 159 aa9.3□□□□□ -0.92
CHD3-207ENST00000466233 RNASE4P34096 147 aaKnown RBP9.3□□□□□ -0.92
CHD3-207ENST00000466233 CYCSP99999 105 aaKnown RBP9.3□□□□□ -0.92
CHD3-207ENST00000466233 ERCC8Q13216 396 aa9.3□□□□□ -0.92
CHD3-207ENST00000466233 Q6ZRN7 208 aaPredicted RBP9.3□□□□□ -0.92
CHD3-207ENST00000466233 NFE4Q86UQ8 179 aa9.3□□□□□ -0.92
CHD3-207ENST00000466233 SLC25A2Q9BXI2 301 aa9.3□□□□□ -0.92
CHD3-207ENST00000466233 NMES1Q9C002 83 aa9.3□□□□□ -0.92
CHD3-207ENST00000466233 OR51M1Q9H341 326 aa9.3□□□□□ -0.92
CHD3-207ENST00000466233 GPN1Q9HCN4 374 aaPredicted RBP9.3□□□□□ -0.92
CHD3-207ENST00000466233 HSPG2P98160 4391 aa9.29□□□□□ -0.92
CHD3-207ENST00000466233 IGHV1OR15-1A0A075B7D0 117 aa9.29□□□□□ -0.92
CHD3-207ENST00000466233 PAX4O43316 350 aa9.29□□□□□ -0.92
CHD3-207ENST00000466233 PYYP10082 97 aa9.29□□□□□ -0.92
CHD3-207ENST00000466233 PRB4P10163 310 aaPredicted RBP9.29□□□□□ -0.92
CHD3-207ENST00000466233 ZNF138P52744 262 aa9.29□□□□□ -0.92
CHD3-207ENST00000466233 BTN1A1Q13410 526 aa9.29□□□□□ -0.92
CHD3-207ENST00000466233 ICAM4Q14773 271 aa9.29□□□□□ -0.92
CHD3-207ENST00000466233 MRPL23Q16540 153 aaKnown RBP9.29□□□□□ -0.92
CHD3-207ENST00000466233 EXOC3-AS1Q8N2X6 119 aa9.29□□□□□ -0.92
CHD3-207ENST00000466233 ARL6IP6Q8N6S5 226 aa9.29□□□□□ -0.92
CHD3-207ENST00000466233 TMED6Q8WW62 240 aa9.29□□□□□ -0.92
CHD3-207ENST00000466233 HHLA3Q9XRX5 114 aa9.29□□□□□ -0.92
CHD3-207ENST00000466233 TRAV9-2A0A087WT02 112 aa9.28□□□□□ -0.92
CHD3-207ENST00000466233 EREGO14944 169 aa9.28□□□□□ -0.92
CHD3-207ENST00000466233 CSN1S1P47710 185 aa9.28□□□□□ -0.92
CHD3-207ENST00000466233 CRYBA4P53673 196 aa9.28□□□□□ -0.92
CHD3-207ENST00000466233 LINC00315P59091 139 aa9.28□□□□□ -0.92
CHD3-207ENST00000466233 ASAH1Q13510 395 aa9.28□□□□□ -0.92
CHD3-207ENST00000466233 ZNF266Q14584 549 aa9.28□□□□□ -0.92
CHD3-207ENST00000466233 OR5C1Q8NGR4 320 aa9.28□□□□□ -0.92
CHD3-207ENST00000466233 BLNKQ8WV28 456 aa9.28□□□□□ -0.92
CHD3-207ENST00000466233 RASL10AQ92737 203 aa9.28□□□□□ -0.92
CHD3-207ENST00000466233 BOLA1Q9Y3E2 137 aa9.28□□□□□ -0.92
CHD3-207ENST00000466233 ABCA13Q86UQ4 5058 aa9.28□□□□□ -0.92
CHD3-207ENST00000466233 C17orf112F2Z3M2 114 aa9.27□□□□□ -0.93
CHD3-207ENST00000466233 KRTAP10-2P60368 255 aa9.27□□□□□ -0.93
CHD3-207ENST00000466233 NHLH2Q02577 135 aa9.27□□□□□ -0.93
CHD3-207ENST00000466233 ZNF415Q09FC8 603 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms