RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 MAXP61244 160 aa0.76□□□□□ -2.29
GARNL3-213ENST00000464616 RPS28P62857 69 aaKnown RBP0.76□□□□□ -2.29
GARNL3-213ENST00000464616 ASB16-AS1Q495Z4 193 aa0.76□□□□□ -2.29
GARNL3-213ENST00000464616 SAMD13Q5VXD3 122 aa0.76□□□□□ -2.29
GARNL3-213ENST00000464616 CASC2Q6XLA1 102 aa0.76□□□□□ -2.29
GARNL3-213ENST00000464616 LINC00269Q8N2A0 174 aa0.76□□□□□ -2.29
GARNL3-213ENST00000464616 Q8N6K4 173 aa0.76□□□□□ -2.29
GARNL3-213ENST00000464616 TMEM229BQ8NBD8 167 aa0.76□□□□□ -2.29
GARNL3-213ENST00000464616 TMEM35BQ8NCS4 154 aa0.76□□□□□ -2.29
GARNL3-213ENST00000464616 CARD19Q96LW7 228 aa0.76□□□□□ -2.29
GARNL3-213ENST00000464616 CIB3Q96Q77 187 aaPredicted RBP0.76□□□□□ -2.29
GARNL3-213ENST00000464616 MED31Q9Y3C7 131 aa0.76□□□□□ -2.29
GARNL3-213ENST00000464616 E9PCH4 1651 aa0.75□□□□□ -2.29
GARNL3-213ENST00000464616 C9orf170A2RU37 121 aa0.75□□□□□ -2.29
GARNL3-213ENST00000464616 C5orf67F2Z3F1 127 aa0.75□□□□□ -2.29
GARNL3-213ENST00000464616 GABARAPH6UMI1 98 aa0.75□□□□□ -2.29
GARNL3-213ENST00000464616 IGHV3-30P01768 117 aa0.75□□□□□ -2.29
GARNL3-213ENST00000464616 IGHV3-30-5P0DP03 117 aa0.75□□□□□ -2.29
GARNL3-213ENST00000464616 POLR2HP52434 150 aaKnown RBP0.75□□□□□ -2.29
GARNL3-213ENST00000464616 IZUMO2Q6UXV1 221 aa0.75□□□□□ -2.29
GARNL3-213ENST00000464616 ATOH7Q8N100 152 aa0.75□□□□□ -2.29
GARNL3-213ENST00000464616 C10orf111Q8N326 155 aa0.75□□□□□ -2.29
GARNL3-213ENST00000464616 MPC1Q9Y5U8 109 aa0.75□□□□□ -2.29
GARNL3-213ENST00000464616 PBRM1Q86U86 1689 aa0.75□□□□□ -2.29
GARNL3-213ENST00000464616 FRMPD1Q5SYB0 1578 aa0.74□□□□□ -2.29
GARNL3-213ENST00000464616 A2MP01023 1474 aa0.74□□□□□ -2.29
GARNL3-213ENST00000464616 COL1A1P02452 1464 aaPredicted RBP0.74□□□□□ -2.29
GARNL3-213ENST00000464616 ERBINQ96RT1 1412 aa0.74□□□□□ -2.29
GARNL3-213ENST00000464616 PTPRDP23468 1912 aa0.74□□□□□ -2.29
GARNL3-213ENST00000464616 TRAV23DV6A0A075B6W5 121 aa0.74□□□□□ -2.29
GARNL3-213ENST00000464616 IFITM5A6NNB3 132 aa0.74□□□□□ -2.29
GARNL3-213ENST00000464616 BBIP1A8MTZ0 92 aa0.74□□□□□ -2.29
GARNL3-213ENST00000464616 GYPBP06028 91 aa0.74□□□□□ -2.29
GARNL3-213ENST00000464616 MAGOHBQ96A72 148 aaKnown RBP0.74□□□□□ -2.29
GARNL3-213ENST00000464616 H7BYZ3 331 aa0.73□□□□□ -2.29
GARNL3-213ENST00000464616 PDE6GP18545 87 aa0.73□□□□□ -2.29
GARNL3-213ENST00000464616 DR1Q01658 176 aa0.73□□□□□ -2.29
GARNL3-213ENST00000464616 C3orf62Q6ZUJ4 267 aa0.73□□□□□ -2.29
GARNL3-213ENST00000464616 SBSPONQ8IVN8 264 aa0.73□□□□□ -2.29
GARNL3-213ENST00000464616 TCTEX1D1Q8N7M0 179 aa0.73□□□□□ -2.29
GARNL3-213ENST00000464616 MORN4Q8NDC4 146 aa0.73□□□□□ -2.29
GARNL3-213ENST00000464616 OR5A2Q8NGI9 324 aa0.73□□□□□ -2.29
GARNL3-213ENST00000464616 RMND5BQ96G75 393 aaPredicted RBP0.73□□□□□ -2.29
GARNL3-213ENST00000464616 KMT2BQ9UMN6 2715 aaPredicted RBP0.73□□□□□ -2.29
GARNL3-213ENST00000464616 SNRNP200O75643 2136 aaKnown RBP0.73□□□□□ -2.29
GARNL3-213ENST00000464616 TRBV30A0A0K0K1B3 111 aa0.72□□□□□ -2.29
GARNL3-213ENST00000464616 C3orf85A0A1B0GTC6 90 aa0.72□□□□□ -2.29
GARNL3-213ENST00000464616 PNMA8CA0A1B0GUJ8 204 aa0.72□□□□□ -2.29
GARNL3-213ENST00000464616 GNG14A0A1W2PPG7 69 aa0.72□□□□□ -2.29
GARNL3-213ENST00000464616 PRORSD1PA6NEY8 169 aa0.72□□□□□ -2.29
GARNL3-213ENST00000464616 RPL22P35268 128 aaKnown RBP0.72□□□□□ -2.29
GARNL3-213ENST00000464616 FOXA3P55318 350 aaPredicted RBP0.72□□□□□ -2.29
GARNL3-213ENST00000464616 FXYD4P59646 89 aa0.72□□□□□ -2.29
GARNL3-213ENST00000464616 OCIAD2Q56VL3 154 aa0.72□□□□□ -2.29
GARNL3-213ENST00000464616 SPINK9Q5DT21 86 aa0.72□□□□□ -2.29
GARNL3-213ENST00000464616 Q6ZQY7 126 aa0.72□□□□□ -2.29
GARNL3-213ENST00000464616 CCDC115Q96NT0 180 aa0.72□□□□□ -2.29
GARNL3-213ENST00000464616 GINS2Q9Y248 185 aa0.72□□□□□ -2.29
GARNL3-213ENST00000464616 DLC1Q96QB1 1528 aa0.72□□□□□ -2.29
GARNL3-213ENST00000464616 TANC2Q9HCD6 1990 aa0.72□□□□□ -2.29
GARNL3-213ENST00000464616 ROS1P08922 2347 aa0.71□□□□□ -2.3
GARNL3-213ENST00000464616 BORCS7-ASMTA0A0B4J1R7 106 aa0.71□□□□□ -2.3
GARNL3-213ENST00000464616 A0A1W2PPB8 328 aa0.71□□□□□ -2.3
GARNL3-213ENST00000464616 A0A1W2PRS3 328 aa0.71□□□□□ -2.3
GARNL3-213ENST00000464616 ZNF727A8MUV8 499 aa0.71□□□□□ -2.3
GARNL3-213ENST00000464616 KIR3DP1A8MWS1 328 aa0.71□□□□□ -2.3
GARNL3-213ENST00000464616 UQCRQO14949 82 aa0.71□□□□□ -2.3
GARNL3-213ENST00000464616 CRYGSP22914 178 aa0.71□□□□□ -2.3
GARNL3-213ENST00000464616 B2MP61769 119 aa0.71□□□□□ -2.3
GARNL3-213ENST00000464616 PSPHP78330 225 aa0.71□□□□□ -2.3
GARNL3-213ENST00000464616 NEDD8Q15843 81 aa0.71□□□□□ -2.3
GARNL3-213ENST00000464616 Q6ZS92 163 aa0.71□□□□□ -2.3
GARNL3-213ENST00000464616 NAT14Q8WUY8 206 aa0.71□□□□□ -2.3
GARNL3-213ENST00000464616 CLEC2BQ92478 149 aa0.71□□□□□ -2.3
GARNL3-213ENST00000464616 SMIM7Q9BQ49 75 aa0.71□□□□□ -2.3
GARNL3-213ENST00000464616 CBLN4Q9NTU7 201 aa0.71□□□□□ -2.3
GARNL3-213ENST00000464616 JPT1Q9UK76 154 aa0.71□□□□□ -2.3
GARNL3-213ENST00000464616 TCOF1Q13428 1488 aaKnown RBP0.71□□□□□ -2.3
GARNL3-213ENST00000464616 HELZ2Q9BYK8 2649 aaKnown RBP0.7□□□□□ -2.3
GARNL3-213ENST00000464616 LOC107984640A0A0U1RRK4 108 aa0.7□□□□□ -2.3
GARNL3-213ENST00000464616 TMEM189A5PLL7 270 aa0.7□□□□□ -2.3
GARNL3-213ENST00000464616 H0YJX3 145 aa0.7□□□□□ -2.3
GARNL3-213ENST00000464616 HBDP02042 147 aa0.7□□□□□ -2.3
GARNL3-213ENST00000464616 DBIP07108 87 aaKnown RBP0.7□□□□□ -2.3
GARNL3-213ENST00000464616 CCL4P13236 92 aa0.7□□□□□ -2.3
GARNL3-213ENST00000464616 HIST1H1BP16401 226 aaKnown RBP0.7□□□□□ -2.3
GARNL3-213ENST00000464616 PRB3Q04118 309 aaPredicted RBP0.7□□□□□ -2.3
GARNL3-213ENST00000464616 TAC4Q86UU9 113 aa0.7□□□□□ -2.3
GARNL3-213ENST00000464616 OR8J3Q8NGG0 315 aa0.7□□□□□ -2.3
GARNL3-213ENST00000464616 PYDC1Q8WXC3 89 aa0.7□□□□□ -2.3
GARNL3-213ENST00000464616 VPS25Q9BRG1 176 aa0.7□□□□□ -2.3
GARNL3-213ENST00000464616 TRAPPC2LQ9UL33 140 aa0.7□□□□□ -2.3
GARNL3-213ENST00000464616 KIAA1549LQ6ZVL6 1849 aa0.69□□□□□ -2.3
GARNL3-213ENST00000464616 ZFC3H1O60293 1989 aaKnown RBP0.69□□□□□ -2.3
GARNL3-213ENST00000464616 J3KT08 172 aa0.69□□□□□ -2.3
GARNL3-213ENST00000464616 DPM2O94777 84 aa0.69□□□□□ -2.3
GARNL3-213ENST00000464616 NBEAP1P0C6P0 100 aa0.69□□□□□ -2.3
GARNL3-213ENST00000464616 CKS2P33552 79 aa0.69□□□□□ -2.3
GARNL3-213ENST00000464616 GTF2A1P52655 376 aaPredicted RBP0.69□□□□□ -2.3
GARNL3-213ENST00000464616 SNRPD3P62318 126 aaKnown RBP0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms