RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 TRAV6A0A075B6T7 132 aa10.63□□□□□ -0.71
SKA3-204ENST00000462482 M0R3E3 92 aa10.63□□□□□ -0.71
SKA3-204ENST00000462482 TCRBP04435 133 aa10.63□□□□□ -0.71
SKA3-204ENST00000462482 FGF7P21781 194 aa10.63□□□□□ -0.71
SKA3-204ENST00000462482 ERCC8Q13216 396 aa10.63□□□□□ -0.71
SKA3-204ENST00000462482 VWC2Q2TAL6 325 aa10.63□□□□□ -0.71
SKA3-204ENST00000462482 ANXA2RQ3ZCQ2 193 aa10.63□□□□□ -0.71
SKA3-204ENST00000462482 TMEM78Q5T7P6 136 aa10.63□□□□□ -0.71
SKA3-204ENST00000462482 BLNKQ8WV28 456 aa10.63□□□□□ -0.71
SKA3-204ENST00000462482 C18orf15Q96N68 181 aa10.63□□□□□ -0.71
SKA3-204ENST00000462482 ARPC5LQ9BPX5 153 aa10.63□□□□□ -0.71
SKA3-204ENST00000462482 LINC00467Q9BRT7 94 aa10.63□□□□□ -0.71
SKA3-204ENST00000462482 SCRT2Q9NQ03 307 aa10.63□□□□□ -0.71
SKA3-204ENST00000462482 LYRM2Q9NU23 88 aaPredicted RBP10.63□□□□□ -0.71
SKA3-204ENST00000462482 ICOSQ9Y6W8 199 aa10.63□□□□□ -0.71
SKA3-204ENST00000462482 A0A096LPF7 62 aa10.62□□□□□ -0.71
SKA3-204ENST00000462482 RGS13O14921 159 aa10.62□□□□□ -0.71
SKA3-204ENST00000462482 SIVA1O15304 175 aa10.62□□□□□ -0.71
SKA3-204ENST00000462482 PAX4O43316 350 aa10.62□□□□□ -0.71
SKA3-204ENST00000462482 SLAQ13239 276 aa10.62□□□□□ -0.71
SKA3-204ENST00000462482 TMEM252Q8N6L7 170 aa10.62□□□□□ -0.71
SKA3-204ENST00000462482 CHAC2Q8WUX2 184 aa10.62□□□□□ -0.71
SKA3-204ENST00000462482 SEC22CQ9BRL7 303 aa10.62□□□□□ -0.71
SKA3-204ENST00000462482 GPN1Q9HCN4 374 aaPredicted RBP10.62□□□□□ -0.71
SKA3-204ENST00000462482 NUDT15Q9NV35 164 aa10.62□□□□□ -0.71
SKA3-204ENST00000462482 MUC4Q99102 2169 aa10.62□□□□□ -0.71
SKA3-204ENST00000462482 KLLNB2CW77 178 aa10.61□□□□□ -0.71
SKA3-204ENST00000462482 NMBP08949 121 aa10.61□□□□□ -0.71
SKA3-204ENST00000462482 TCL1AP56279 114 aa10.61□□□□□ -0.71
SKA3-204ENST00000462482 BTN1A1Q13410 526 aa10.61□□□□□ -0.71
SKA3-204ENST00000462482 IBA57Q5T440 356 aaKnown RBP10.61□□□□□ -0.71
SKA3-204ENST00000462482 C11orf72Q8NBR9 251 aa10.61□□□□□ -0.71
SKA3-204ENST00000462482 VSIG2Q96IQ7 327 aa10.61□□□□□ -0.71
SKA3-204ENST00000462482 AGPAT4-IT1Q9H0P7 198 aa10.61□□□□□ -0.71
SKA3-204ENST00000462482 IGSF23A1L1A6 192 aa10.6□□□□□ -0.71
SKA3-204ENST00000462482 PLA2G10O15496 165 aa10.6□□□□□ -0.71
SKA3-204ENST00000462482 ZNF324O75467 553 aaPredicted RBP10.6□□□□□ -0.71
SKA3-204ENST00000462482 PYYP10082 97 aa10.6□□□□□ -0.71
SKA3-204ENST00000462482 LINC00315P59091 139 aa10.6□□□□□ -0.71
SKA3-204ENST00000462482 CD300CQ08708 224 aa10.6□□□□□ -0.71
SKA3-204ENST00000462482 ICAM4Q14773 271 aa10.6□□□□□ -0.71
SKA3-204ENST00000462482 EXOC3-AS1Q8N2X6 119 aa10.6□□□□□ -0.71
SKA3-204ENST00000462482 KLF12Q9Y4X4 402 aa10.6□□□□□ -0.71
SKA3-204ENST00000462482 TRAV9-2A0A087WT02 112 aa10.59□□□□□ -0.71
SKA3-204ENST00000462482 SPINK4O60575 86 aa10.59□□□□□ -0.71
SKA3-204ENST00000462482 NDUFB4O95168 129 aa10.59□□□□□ -0.71
SKA3-204ENST00000462482 H2AFB2P0C5Z0 115 aa10.59□□□□□ -0.71
SKA3-204ENST00000462482 CRISP2P16562 243 aa10.59□□□□□ -0.71
SKA3-204ENST00000462482 KRTAP10-2P60368 255 aa10.59□□□□□ -0.71
SKA3-204ENST00000462482 RAB32Q13637 225 aa10.59□□□□□ -0.71
SKA3-204ENST00000462482 FAM122CQ6P4D5 195 aa10.59□□□□□ -0.71
SKA3-204ENST00000462482 C9orf47Q6ZRZ4 202 aa10.59□□□□□ -0.71
SKA3-204ENST00000462482 ST6GAL2Q96JF0 529 aa10.59□□□□□ -0.71
SKA3-204ENST00000462482 C11orf1Q9H5F2 150 aa10.59□□□□□ -0.71
SKA3-204ENST00000462482 KCNIP2Q9NS61 270 aa10.59□□□□□ -0.71
SKA3-204ENST00000462482 PGPEP1Q9NXJ5 209 aa10.59□□□□□ -0.71
SKA3-204ENST00000462482 PRO0255Q9UI72 69 aa10.59□□□□□ -0.71
SKA3-204ENST00000462482 IGHV1OR15-1A0A075B7D0 117 aa10.58□□□□□ -0.72
SKA3-204ENST00000462482 IGKV2-40A0A087WW87 121 aaPredicted RBP10.58□□□□□ -0.72
SKA3-204ENST00000462482 NXPH4O95158 308 aa10.58□□□□□ -0.72
SKA3-204ENST00000462482 IGKV2D-40P01614 121 aaPredicted RBP10.58□□□□□ -0.72
SKA3-204ENST00000462482 IGHV3-53P01767 116 aa10.58□□□□□ -0.72
SKA3-204ENST00000462482 CSN1S1P47710 185 aa10.58□□□□□ -0.72
SKA3-204ENST00000462482 ERVFC1-1P60608 527 aa10.58□□□□□ -0.72
SKA3-204ENST00000462482 MRPL23Q16540 153 aaKnown RBP10.58□□□□□ -0.72
SKA3-204ENST00000462482 NFE4Q86UQ8 179 aa10.58□□□□□ -0.72
SKA3-204ENST00000462482 FAM19A4Q96LR4 140 aa10.58□□□□□ -0.72
SKA3-204ENST00000462482 NPCDR1Q9BY65 106 aa10.58□□□□□ -0.72
SKA3-204ENST00000462482 FAM240BA0A1B0GVZ2 78 aa10.57□□□□□ -0.72
SKA3-204ENST00000462482 NBEAP1P0C6P0 100 aa10.57□□□□□ -0.72
SKA3-204ENST00000462482 ZNF415Q09FC8 603 aa10.57□□□□□ -0.72
SKA3-204ENST00000462482 VGLL1Q99990 258 aa10.57□□□□□ -0.72
SKA3-204ENST00000462482 SLC25A31Q9H0C2 315 aa10.57□□□□□ -0.72
SKA3-204ENST00000462482 OR51M1Q9H341 326 aa10.57□□□□□ -0.72
SKA3-204ENST00000462482 MRPL16Q9NX20 251 aaKnown RBP10.57□□□□□ -0.72
SKA3-204ENST00000462482 HHLA3Q9XRX5 114 aa10.57□□□□□ -0.72
SKA3-204ENST00000462482 HSPG2P98160 4391 aa10.57□□□□□ -0.72
SKA3-204ENST00000462482 TRGV4A0A0C4DH28 118 aa10.56□□□□□ -0.72
SKA3-204ENST00000462482 ZNF138P52744 262 aa10.56□□□□□ -0.72
SKA3-204ENST00000462482 GCSAMLQ5JQS6 135 aa10.56□□□□□ -0.72
SKA3-204ENST00000462482 MZT2BQ6NZ67 158 aa10.56□□□□□ -0.72
SKA3-204ENST00000462482 THAP6Q8TBB0 222 aa10.56□□□□□ -0.72
SKA3-204ENST00000462482 PCNPQ8WW12 178 aaKnown RBP10.56□□□□□ -0.72
SKA3-204ENST00000462482 CCDC32Q9BV29 185 aa10.56□□□□□ -0.72
SKA3-204ENST00000462482 SLC25A2Q9BXI2 301 aa10.56□□□□□ -0.72
SKA3-204ENST00000462482 MRPL32Q9BYC8 188 aaKnown RBP10.56□□□□□ -0.72
SKA3-204ENST00000462482 ZNF492Q9P255 531 aa10.56□□□□□ -0.72
SKA3-204ENST00000462482 TRBV7-9A0A0J9YWB2 115 aa10.55□□□□□ -0.72
SKA3-204ENST00000462482 C17orf112F2Z3M2 114 aa10.55□□□□□ -0.72
SKA3-204ENST00000462482 CDPF1Q6NVV7 123 aa10.55□□□□□ -0.72
SKA3-204ENST00000462482 NEGR1Q7Z3B1 354 aa10.55□□□□□ -0.72
SKA3-204ENST00000462482 ZFAND2AQ8N6M9 145 aa10.55□□□□□ -0.72
SKA3-204ENST00000462482 OR5C1Q8NGR4 320 aa10.55□□□□□ -0.72
SKA3-204ENST00000462482 C8orf49Q96NF6 230 aa10.55□□□□□ -0.72
SKA3-204ENST00000462482 PAXXQ9BUH6 204 aa10.55□□□□□ -0.72
SKA3-204ENST00000462482 TP53TG3Q9ULZ0 132 aa10.55□□□□□ -0.72
SKA3-204ENST00000462482 LRP1BQ9NZR2 4599 aa10.55□□□□□ -0.72
SKA3-204ENST00000462482 EPM2AB3EWF7 344 aa10.54□□□□□ -0.72
SKA3-204ENST00000462482 E5RGE8 158 aa10.54□□□□□ -0.72
SKA3-204ENST00000462482 IFNA5P01569 189 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms