RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 ARPC1AQ92747 370 aa9.68□□□□□ -0.86
COL4A6-204ENST00000461897 SCRT2Q9NQ03 307 aa9.68□□□□□ -0.86
COL4A6-204ENST00000461897 U3KQK5 164 aa9.68□□□□□ -0.86
COL4A6-204ENST00000461897 NPIPB5A8MRT5 1133 aa9.68□□□□□ -0.86
COL4A6-204ENST00000461897 RNF223E7ERA6 249 aa9.68□□□□□ -0.86
COL4A6-204ENST00000461897 GATA3P23771 443 aa9.68□□□□□ -0.86
COL4A6-204ENST00000461897 LOXL1Q08397 574 aaPredicted RBP9.68□□□□□ -0.86
COL4A6-204ENST00000461897 SLC25A34Q6PIV7 304 aa9.68□□□□□ -0.86
COL4A6-204ENST00000461897 KRTAP1-3Q8IUG1 177 aa9.68□□□□□ -0.86
COL4A6-204ENST00000461897 PIFOQ8TCI5 191 aa9.68□□□□□ -0.86
COL4A6-204ENST00000461897 C17orf77Q96MU5 243 aa9.68□□□□□ -0.86
COL4A6-204ENST00000461897 TMUB1Q9BVT8 246 aa9.68□□□□□ -0.86
COL4A6-204ENST00000461897 CBY1Q9Y3M2 126 aa9.68□□□□□ -0.86
COL4A6-204ENST00000461897 IGHV7-81A0A0B4J1V7 117 aa9.67□□□□□ -0.86
COL4A6-204ENST00000461897 FBLL1A6NHQ2 334 aaKnown RBP9.67□□□□□ -0.86
COL4A6-204ENST00000461897 HSBP1L1C9JCN9 74 aa9.67□□□□□ -0.86
COL4A6-204ENST00000461897 PRR31Q5SQ13 230 aa9.67□□□□□ -0.86
COL4A6-204ENST00000461897 DPF1Q92782 380 aa9.67□□□□□ -0.86
COL4A6-204ENST00000461897 AP5S1Q9NUS5 200 aa9.67□□□□□ -0.86
COL4A6-204ENST00000461897 AKAP9Q99996 3911 aa9.66□□□□□ -0.86
COL4A6-204ENST00000461897 IGLV11-55A0A075B6I3 123 aa9.66□□□□□ -0.86
COL4A6-204ENST00000461897 EGR2P11161 476 aaPredicted RBP9.66□□□□□ -0.86
COL4A6-204ENST00000461897 PTTG1IPP53801 180 aa9.66□□□□□ -0.86
COL4A6-204ENST00000461897 ZNF747Q9BV97 191 aa9.66□□□□□ -0.86
COL4A6-204ENST00000461897 MEGF9Q9H1U4 602 aa9.66□□□□□ -0.86
COL4A6-204ENST00000461897 hDV102S1A0JD36 115 aa9.66□□□□□ -0.86
COL4A6-204ENST00000461897 K7EP13 123 aa9.66□□□□□ -0.86
COL4A6-204ENST00000461897 IL4P05112 153 aa9.66□□□□□ -0.86
COL4A6-204ENST00000461897 RPS20P60866 119 aaKnown RBP9.66□□□□□ -0.86
COL4A6-204ENST00000461897 BVES-AS1Q5T3Y7 98 aa9.66□□□□□ -0.86
COL4A6-204ENST00000461897 C12orf54Q6X4T0 127 aa9.66□□□□□ -0.86
COL4A6-204ENST00000461897 FANCD2OSQ96PS1 177 aa9.66□□□□□ -0.86
COL4A6-204ENST00000461897 F8W735 103 aaPredicted RBP9.65□□□□□ -0.86
COL4A6-204ENST00000461897 CSN1S1P47710 185 aa9.65□□□□□ -0.86
COL4A6-204ENST00000461897 TMEM219Q86XT9 240 aa9.65□□□□□ -0.86
COL4A6-204ENST00000461897 C5orf56Q8N8D9 126 aa9.65□□□□□ -0.86
COL4A6-204ENST00000461897 OR10AG1Q8NH19 301 aa9.65□□□□□ -0.86
COL4A6-204ENST00000461897 PMCHL2Q9BQD1 86 aa9.65□□□□□ -0.86
COL4A6-204ENST00000461897 CT45A10P0DMU9 189 aa9.64□□□□□ -0.87
COL4A6-204ENST00000461897 IGHV4-31P0DP07 118 aa9.64□□□□□ -0.87
COL4A6-204ENST00000461897 ZNF138P52744 262 aa9.64□□□□□ -0.87
COL4A6-204ENST00000461897 MFAP4P55083 255 aa9.64□□□□□ -0.87
COL4A6-204ENST00000461897 RHOGP84095 191 aa9.64□□□□□ -0.87
COL4A6-204ENST00000461897 PSG9Q00887 426 aa9.64□□□□□ -0.87
COL4A6-204ENST00000461897 MPV17L2Q567V2 206 aa9.64□□□□□ -0.87
COL4A6-204ENST00000461897 TTC9CQ8N5M4 171 aa9.64□□□□□ -0.87
COL4A6-204ENST00000461897 DEFB125Q8N687 156 aa9.64□□□□□ -0.87
COL4A6-204ENST00000461897 Q96MF0 132 aa9.64□□□□□ -0.87
COL4A6-204ENST00000461897 NPFFR1Q9GZQ6 430 aa9.64□□□□□ -0.87
COL4A6-204ENST00000461897 TGFAP01135 160 aa9.64□□□□□ -0.87
COL4A6-204ENST00000461897 FCGR2BP31994 310 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-204ENST00000461897 SRSF2Q01130 221 aaKnown RBP9.64□□□□□ -0.87
COL4A6-204ENST00000461897 HIST1H1AQ02539 215 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-204ENST00000461897 FAM104BQ5XKR9 115 aa9.64□□□□□ -0.87
COL4A6-204ENST00000461897 FA2HQ7L5A8 372 aa9.64□□□□□ -0.87
COL4A6-204ENST00000461897 AAMDCQ9H7C9 122 aa9.64□□□□□ -0.87
COL4A6-204ENST00000461897 PDZD2O15018 2839 aa9.63□□□□□ -0.87
COL4A6-204ENST00000461897 GCN1Q92616 2671 aaKnown RBP9.63□□□□□ -0.87
COL4A6-204ENST00000461897 A0A096LNJ9 63 aa9.63□□□□□ -0.87
COL4A6-204ENST00000461897 J3QLI3 93 aa9.63□□□□□ -0.87
COL4A6-204ENST00000461897 M0R3E3 92 aa9.63□□□□□ -0.87
COL4A6-204ENST00000461897 TAX1BP3O14907 124 aa9.63□□□□□ -0.87
COL4A6-204ENST00000461897 ATP6V0E1O15342 81 aa9.63□□□□□ -0.87
COL4A6-204ENST00000461897 GNG7O60262 68 aa9.63□□□□□ -0.87
COL4A6-204ENST00000461897 COX8AP10176 69 aa9.63□□□□□ -0.87
COL4A6-204ENST00000461897 SAPCD1Q5SSQ6 148 aa9.63□□□□□ -0.87
COL4A6-204ENST00000461897 PRSS57Q6UWY2 283 aa9.63□□□□□ -0.87
COL4A6-204ENST00000461897 C8orf49Q96NF6 230 aa9.63□□□□□ -0.87
COL4A6-204ENST00000461897 MOB4Q9Y3A3 225 aa9.63□□□□□ -0.87
COL4A6-204ENST00000461897 CSPG4Q6UVK1 2322 aa9.62□□□□□ -0.87
COL4A6-204ENST00000461897 CREBBPQ92793 2442 aa9.62□□□□□ -0.87
COL4A6-204ENST00000461897 TMEM189A5PLL7 270 aa9.62□□□□□ -0.87
COL4A6-204ENST00000461897 LINC01548A6NM66 108 aa9.62□□□□□ -0.87
COL4A6-204ENST00000461897 NUDT3O95989 172 aa9.62□□□□□ -0.87
COL4A6-204ENST00000461897 RPL7P18124 248 aaKnown RBP9.62□□□□□ -0.87
COL4A6-204ENST00000461897 Q6ZVH6 145 aa9.62□□□□□ -0.87
COL4A6-204ENST00000461897 PRRC2AP48634 2157 aaKnown RBP9.62□□□□□ -0.87
COL4A6-204ENST00000461897 H3BUX3 64 aa9.62□□□□□ -0.87
COL4A6-204ENST00000461897 CSN3P07498 182 aa9.62□□□□□ -0.87
COL4A6-204ENST00000461897 KLK9Q2XQG4 91 aa9.62□□□□□ -0.87
COL4A6-204ENST00000461897 PRSS3P2Q8NHM4 247 aa9.62□□□□□ -0.87
COL4A6-204ENST00000461897 TP73-AS1Q9UF72 201 aa9.62□□□□□ -0.87
COL4A6-204ENST00000461897 KLK9Q9UKQ9 250 aa9.62□□□□□ -0.87
COL4A6-204ENST00000461897 CD5LO43866 347 aa9.61□□□□□ -0.87
COL4A6-204ENST00000461897 SH2D1AO60880 128 aa9.61□□□□□ -0.87
COL4A6-204ENST00000461897 LGALS9BQ3B8N2 356 aa9.61□□□□□ -0.87
COL4A6-204ENST00000461897 LGALS9CQ6DKI2 356 aa9.61□□□□□ -0.87
COL4A6-204ENST00000461897 LYZL1Q6UWQ5 148 aa9.61□□□□□ -0.87
COL4A6-204ENST00000461897 ORMDL3Q8N138 153 aa9.61□□□□□ -0.87
COL4A6-204ENST00000461897 OR1N2Q8NGR9 330 aa9.61□□□□□ -0.87
COL4A6-204ENST00000461897 C21orf62Q9NYP8 219 aa9.61□□□□□ -0.87
COL4A6-204ENST00000461897 SIGLEC8Q9NYZ4 499 aa9.61□□□□□ -0.87
COL4A6-204ENST00000461897 A6NDX4 124 aa9.6□□□□□ -0.87
COL4A6-204ENST00000461897 FSHBP01225 129 aa9.6□□□□□ -0.87
COL4A6-204ENST00000461897 LY6EQ16553 131 aa9.6□□□□□ -0.87
COL4A6-204ENST00000461897 ECSCRQ19T08 205 aa9.6□□□□□ -0.87
COL4A6-204ENST00000461897 C2orf91Q6ZV80 131 aa9.6□□□□□ -0.87
COL4A6-204ENST00000461897 BCL6BQ8N143 479 aaPredicted RBP9.6□□□□□ -0.87
COL4A6-204ENST00000461897 FAM110DQ8TAY7 271 aaPredicted RBP9.6□□□□□ -0.87
COL4A6-204ENST00000461897 PRR25Q96S07 402 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms