RNA–Protein interactions for RNA: ENST00000460801.5

PTPRN-210, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 2

Gene PTPRN, Length 2,239 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-210ENST00000460801 LOC102724200A0A096LPH7 203 aaPredicted RBP10.66□□□□□ -0.7
PTPRN-210ENST00000460801 FSHBP01225 129 aa10.66□□□□□ -0.7
PTPRN-210ENST00000460801 BMI1P35226 326 aa10.66□□□□□ -0.7
PTPRN-210ENST00000460801 ERCC8Q13216 396 aa10.66□□□□□ -0.7
PTPRN-210ENST00000460801 NDFIP1Q9BT67 221 aa10.66□□□□□ -0.7
PTPRN-210ENST00000460801 ZANQ9Y493 2812 aa10.66□□□□□ -0.7
PTPRN-210ENST00000460801 A0A0G2JLM5 398 aa10.66□□□□□ -0.7
PTPRN-210ENST00000460801 IGHV3-11P01762 117 aa10.66□□□□□ -0.7
PTPRN-210ENST00000460801 IGHV4-31P0DP07 118 aa10.66□□□□□ -0.7
PTPRN-210ENST00000460801 PMCHP20382 165 aa10.66□□□□□ -0.7
PTPRN-210ENST00000460801 DEFB113Q30KQ7 82 aa10.66□□□□□ -0.7
PTPRN-210ENST00000460801 NIT1Q86X76 327 aa10.66□□□□□ -0.7
PTPRN-210ENST00000460801 LRRC75A-AS1Q8N1F1 130 aa10.66□□□□□ -0.7
PTPRN-210ENST00000460801 OR4X2Q8NGF9 303 aa10.66□□□□□ -0.7
PTPRN-210ENST00000460801 RNF114Q9Y508 228 aa10.66□□□□□ -0.7
PTPRN-210ENST00000460801 CR1P17927 2039 aa10.66□□□□□ -0.7
PTPRN-210ENST00000460801 DDTP30046 118 aa10.65□□□□□ -0.7
PTPRN-210ENST00000460801 SRSF2Q01130 221 aaKnown RBP10.65□□□□□ -0.7
PTPRN-210ENST00000460801 SMAD7O15105 426 aaKnown RBP10.65□□□□□ -0.71
PTPRN-210ENST00000460801 LCNL1Q6ZST4 164 aa10.65□□□□□ -0.71
PTPRN-210ENST00000460801 ZNF575Q86XF7 245 aa10.65□□□□□ -0.71
PTPRN-210ENST00000460801 FAM19A2Q8N3H0 131 aa10.65□□□□□ -0.71
PTPRN-210ENST00000460801 CLEC5AQ9NY25 188 aa10.65□□□□□ -0.71
PTPRN-210ENST00000460801 TMSB15BA0A087X1C1 80 aa10.64□□□□□ -0.71
PTPRN-210ENST00000460801 RPS20P60866 119 aaKnown RBP10.64□□□□□ -0.71
PTPRN-210ENST00000460801 FAM209BQ5JX69 171 aa10.64□□□□□ -0.71
PTPRN-210ENST00000460801 LYZL1Q6UWQ5 148 aa10.64□□□□□ -0.71
PTPRN-210ENST00000460801 URB1-AS1Q96HZ7 61 aa10.64□□□□□ -0.71
PTPRN-210ENST00000460801 AGPAT4-IT1Q9H0P7 198 aa10.64□□□□□ -0.71
PTPRN-210ENST00000460801 FABP5P3A8MUU1 101 aa10.64□□□□□ -0.71
PTPRN-210ENST00000460801 HSBP1O75506 76 aa10.64□□□□□ -0.71
PTPRN-210ENST00000460801 ZNF705DP0CH99 300 aaPredicted RBP10.64□□□□□ -0.71
PTPRN-210ENST00000460801 ZNF705BP0CI00 300 aaPredicted RBP10.64□□□□□ -0.71
PTPRN-210ENST00000460801 ZNF493Q6ZR52 646 aa10.64□□□□□ -0.71
PTPRN-210ENST00000460801 C9orf139Q6ZV77 190 aa10.64□□□□□ -0.71
PTPRN-210ENST00000460801 BORCS7Q96B45 105 aa10.64□□□□□ -0.71
PTPRN-210ENST00000460801 PSMG3-AS1Q96PY0 264 aa10.64□□□□□ -0.71
PTPRN-210ENST00000460801 TPPP3Q9BW30 176 aa10.64□□□□□ -0.71
PTPRN-210ENST00000460801 NPFFR1Q9GZQ6 430 aa10.64□□□□□ -0.71
PTPRN-210ENST00000460801 TMEM95Q3KNT9 176 aa10.63□□□□□ -0.71
PTPRN-210ENST00000460801 PRRC2AP48634 2157 aaKnown RBP10.63□□□□□ -0.71
PTPRN-210ENST00000460801 CREBBPQ92793 2442 aa10.63□□□□□ -0.71
PTPRN-210ENST00000460801 NTF3P20783 257 aa10.62□□□□□ -0.71
PTPRN-210ENST00000460801 PSMB8P28062 276 aa10.62□□□□□ -0.71
PTPRN-210ENST00000460801 KRTDAPP60985 99 aa10.62□□□□□ -0.71
PTPRN-210ENST00000460801 Q5PR19 223 aa10.62□□□□□ -0.71
PTPRN-210ENST00000460801 RNASEKQ6P5S7 137 aaKnown RBP10.62□□□□□ -0.71
PTPRN-210ENST00000460801 TEX43Q6ZNM6 134 aa10.62□□□□□ -0.71
PTPRN-210ENST00000460801 C9orf47Q6ZRZ4 202 aa10.62□□□□□ -0.71
PTPRN-210ENST00000460801 IL17RELQ6ZVW7 336 aa10.62□□□□□ -0.71
PTPRN-210ENST00000460801 GPHB5Q86YW7 130 aa10.62□□□□□ -0.71
PTPRN-210ENST00000460801 Q8N976 141 aa10.62□□□□□ -0.71
PTPRN-210ENST00000460801 C16orf92Q96LL3 132 aa10.62□□□□□ -0.71
PTPRN-210ENST00000460801 PPP1R14DQ9NXH3 145 aa10.62□□□□□ -0.71
PTPRN-210ENST00000460801 IGLC6P0CF74 106 aa10.62□□□□□ -0.71
PTPRN-210ENST00000460801 CTRLP40313 264 aa10.62□□□□□ -0.71
PTPRN-210ENST00000460801 ZNF138P52744 262 aa10.62□□□□□ -0.71
PTPRN-210ENST00000460801 DEFA6Q01524 100 aa10.62□□□□□ -0.71
PTPRN-210ENST00000460801 TMEM78Q5T7P6 136 aa10.61□□□□□ -0.71
PTPRN-210ENST00000460801 Q6YL49 198 aa10.61□□□□□ -0.71
PTPRN-210ENST00000460801 FER1L6-AS1Q8NA97 138 aa10.61□□□□□ -0.71
PTPRN-210ENST00000460801 KIR2DL5BA0A0G2JN68 375 aa10.61□□□□□ -0.71
PTPRN-210ENST00000460801 KIR2DL5BA0A0G2JPC4 375 aa10.61□□□□□ -0.71
PTPRN-210ENST00000460801 TMEM89A2RUT3 159 aa10.61□□□□□ -0.71
PTPRN-210ENST00000460801 SOCS3O14543 225 aa10.61□□□□□ -0.71
PTPRN-210ENST00000460801 C3orf79P0CE67 100 aa10.61□□□□□ -0.71
PTPRN-210ENST00000460801 LINC01559Q495D7 138 aa10.61□□□□□ -0.71
PTPRN-210ENST00000460801 KIR2DL5AQ8N109 375 aa10.61□□□□□ -0.71
PTPRN-210ENST00000460801 CHCHD1Q96BP2 118 aaKnown RBP10.61□□□□□ -0.71
PTPRN-210ENST00000460801 PEF1Q9UBV8 284 aaKnown RBP10.61□□□□□ -0.71
PTPRN-210ENST00000460801 VPREB3Q9UKI3 123 aa10.61□□□□□ -0.71
PTPRN-210ENST00000460801 TMEM213A2RRL7 107 aa10.6□□□□□ -0.71
PTPRN-210ENST00000460801 ORM1P02763 201 aa10.6□□□□□ -0.71
PTPRN-210ENST00000460801 DMRTA1Q5VZB9 504 aa10.6□□□□□ -0.71
PTPRN-210ENST00000460801 C14orf144Q96I85 54 aa10.6□□□□□ -0.71
PTPRN-210ENST00000460801 C20orf173Q96LM9 149 aa10.6□□□□□ -0.71
PTPRN-210ENST00000460801 IGHV7-4-1A0A0J9YVY3 117 aa10.6□□□□□ -0.71
PTPRN-210ENST00000460801 M0QZ24 198 aa10.6□□□□□ -0.71
PTPRN-210ENST00000460801 M0R2Z0 102 aa10.6□□□□□ -0.71
PTPRN-210ENST00000460801 TDRG1Q3Y452 100 aa10.6□□□□□ -0.71
PTPRN-210ENST00000460801 DAZ1Q9NQZ3 744 aaKnown RBP10.6□□□□□ -0.71
PTPRN-210ENST00000460801 LINC00614P0C842 121 aa10.59□□□□□ -0.71
PTPRN-210ENST00000460801 HIST1H1AQ02539 215 aaPredicted RBP10.59□□□□□ -0.71
PTPRN-210ENST00000460801 TM4SF20Q53R12 229 aa10.59□□□□□ -0.71
PTPRN-210ENST00000460801 REC114Q7Z4M0 266 aa10.59□□□□□ -0.71
PTPRN-210ENST00000460801 KRTAP1-3Q8IUG1 177 aa10.59□□□□□ -0.71
PTPRN-210ENST00000460801 APCP25054 2843 aa10.59□□□□□ -0.71
PTPRN-210ENST00000460801 FAM181BA6NEQ2 426 aa10.58□□□□□ -0.72
PTPRN-210ENST00000460801 K7EMT4 169 aa10.58□□□□□ -0.72
PTPRN-210ENST00000460801 FAM104BQ5XKR9 115 aa10.58□□□□□ -0.72
PTPRN-210ENST00000460801 C10orf99Q6UWK7 81 aa10.58□□□□□ -0.72
PTPRN-210ENST00000460801 PRSS57Q6UWY2 283 aa10.58□□□□□ -0.72
PTPRN-210ENST00000460801 Q96MF0 132 aa10.58□□□□□ -0.72
PTPRN-210ENST00000460801 RHPN1-AS1Q9BWJ2 59 aa10.58□□□□□ -0.72
PTPRN-210ENST00000460801 CNFNQ9BYD5 112 aa10.58□□□□□ -0.72
PTPRN-210ENST00000460801 ZNF738Q8NE65 137 aa10.58□□□□□ -0.72
PTPRN-210ENST00000460801 NDUFAF3Q9BU61 184 aa10.58□□□□□ -0.72
PTPRN-210ENST00000460801 SMPXQ9UHP9 88 aa10.58□□□□□ -0.72
PTPRN-210ENST00000460801 LENEPQ9Y5L5 61 aa10.58□□□□□ -0.72
PTPRN-210ENST00000460801 U3KQK5 164 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms