RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.96□□□□□ -0.491e-7■■■■■ 33.8
CCHCR1-208ENST00000451521 BLNKQ8WV28 456 aa11.96□□□□□ -0.5
CCHCR1-208ENST00000451521 CSPG4Q6UVK1 2322 aa11.96□□□□□ -0.5
CCHCR1-208ENST00000451521 H3BUT2 72 aa11.95□□□□□ -0.5
CCHCR1-208ENST00000451521 HIST2H2BCQ6DN03 193 aa11.95□□□□□ -0.5
CCHCR1-208ENST00000451521 NAV2Q8IVL1 2488 aa11.95□□□□□ -0.5
CCHCR1-208ENST00000451521 GTSF1Q8WW33 167 aa11.95□□□□□ -0.5
CCHCR1-208ENST00000451521 SHANK2-AS3Q9BTD1 123 aa11.95□□□□□ -0.5
CCHCR1-208ENST00000451521 THYN1Q9P016 225 aa11.95□□□□□ -0.5
CCHCR1-208ENST00000451521 KLF12Q9Y4X4 402 aa11.95□□□□□ -0.5
CCHCR1-208ENST00000451521 APCP25054 2843 aa11.95□□□□□ -0.5
CCHCR1-208ENST00000451521 PGPA6NDG6 321 aa11.95□□□□□ -0.5
CCHCR1-208ENST00000451521 H3BRN7 92 aa11.95□□□□□ -0.5
CCHCR1-208ENST00000451521 OR5AL1P0C617 328 aa11.95□□□□□ -0.5
CCHCR1-208ENST00000451521 ZNF138P52744 262 aa11.95□□□□□ -0.5
CCHCR1-208ENST00000451521 LINC00322Q6ZN03 302 aaPredicted RBP11.95□□□□□ -0.5
CCHCR1-208ENST00000451521 ATP6V0BQ99437 205 aa11.95□□□□□ -0.5
CCHCR1-208ENST00000451521 COX8AP10176 69 aa11.94□□□□□ -0.5
CCHCR1-208ENST00000451521 ATP5J2P56134 94 aa11.94□□□□□ -0.5
CCHCR1-208ENST00000451521 RNF125Q96EQ8 232 aa11.94□□□□□ -0.5
CCHCR1-208ENST00000451521 RPP21Q9H633 154 aaKnown RBP11.94□□□□□ -0.5
CCHCR1-208ENST00000451521 ZNF469Q96JG9 3925 aaPredicted RBP11.94□□□□□ -0.5
CCHCR1-208ENST00000451521 SLC25A5P05141 298 aaKnown RBP11.94□□□□□ -0.5
CCHCR1-208ENST00000451521 RPL24P83731 157 aaKnown RBP11.94□□□□□ -0.5
CCHCR1-208ENST00000451521 PGLYRP4Q96LB8 373 aa11.94□□□□□ -0.5
CCHCR1-208ENST00000451521 SIGMAR1Q99720 223 aa11.94□□□□□ -0.5
CCHCR1-208ENST00000451521 C21orf62Q9NYP8 219 aa11.94□□□□□ -0.5
CCHCR1-208ENST00000451521 CCDC168Q8NDH2 2452 aa11.94□□□□□ -0.5
CCHCR1-208ENST00000451521 K7EP34 96 aa11.93□□□□□ -0.5
CCHCR1-208ENST00000451521 FCGR2BP31994 310 aaPredicted RBP11.93□□□□□ -0.5
CCHCR1-208ENST00000451521 RAB9AP51151 201 aa11.93□□□□□ -0.5
CCHCR1-208ENST00000451521 LINC01545Q5VT33 79 aa11.93□□□□□ -0.5
CCHCR1-208ENST00000451521 FAM110DQ8TAY7 271 aaPredicted RBP11.93□□□□□ -0.5
CCHCR1-208ENST00000451521 TMEM190Q8WZ59 177 aa11.93□□□□□ -0.5
CCHCR1-208ENST00000451521 Q9H3A6 140 aa11.93□□□□□ -0.5
CCHCR1-208ENST00000451521 IGHV1-69DA0A0B4J2H0 117 aa11.93□□□□□ -0.5
CCHCR1-208ENST00000451521 IGHV1-69P01742 117 aa11.93□□□□□ -0.5
CCHCR1-208ENST00000451521 KRTAP10-9P60411 292 aa11.93□□□□□ -0.5
CCHCR1-208ENST00000451521 SEC11AP67812 179 aa11.93□□□□□ -0.5
CCHCR1-208ENST00000451521 TMEM97Q5BJF2 176 aa11.93□□□□□ -0.5
CCHCR1-208ENST00000451521 BPIFA4PQ86YQ2 179 aa11.93□□□□□ -0.5
CCHCR1-208ENST00000451521 PRSS22Q9GZN4 317 aa11.93□□□□□ -0.5
CCHCR1-208ENST00000451521 HSPB8Q9UJY1 196 aa11.93□□□□□ -0.5
CCHCR1-208ENST00000451521 S4R3C0 116 aa11.93□□□□□ -0.5
CCHCR1-208ENST00000451521 IGHV3OR16-10A0A075B7F0 116 aa11.92□□□□□ -0.5
CCHCR1-208ENST00000451521 IGHV4-30-2A0A087WSY4 118 aa11.92□□□□□ -0.5
CCHCR1-208ENST00000451521 IL4P05112 153 aa11.92□□□□□ -0.5
CCHCR1-208ENST00000451521 OR2K2Q8NGT1 345 aa11.92□□□□□ -0.5
CCHCR1-208ENST00000451521 NDFIP1Q9BT67 221 aa11.92□□□□□ -0.5
CCHCR1-208ENST00000451521 NPFFR1Q9GZQ6 430 aa11.92□□□□□ -0.5
CCHCR1-208ENST00000451521 OTORQ9NRC9 128 aa11.92□□□□□ -0.5
CCHCR1-208ENST00000451521 SOX21Q9Y651 276 aaPredicted RBP11.92□□□□□ -0.5
CCHCR1-208ENST00000451521 TLN2Q9Y4G6 2542 aa11.92□□□□□ -0.5
CCHCR1-208ENST00000451521 TRAV26-1A0A087WT03 109 aa11.92□□□□□ -0.5
CCHCR1-208ENST00000451521 C9orf118A6NHY6 69 aa11.92□□□□□ -0.5
CCHCR1-208ENST00000451521 A8MWL6 223 aa11.92□□□□□ -0.5
CCHCR1-208ENST00000451521 GPR82Q96P67 336 aa11.92□□□□□ -0.5
CCHCR1-208ENST00000451521 MLST8Q9BVC4 326 aa11.92□□□□□ -0.5
CCHCR1-208ENST00000451521 TMUB1Q9BVT8 246 aa11.92□□□□□ -0.5
CCHCR1-208ENST00000451521 MRPS12O15235 138 aaKnown RBP11.91□□□□□ -0.5
CCHCR1-208ENST00000451521 SCGB1A1P11684 91 aa11.91□□□□□ -0.5
CCHCR1-208ENST00000451521 TIMM8BQ9Y5J9 83 aaPredicted RBP11.91□□□□□ -0.5
CCHCR1-208ENST00000451521 TCRAP04437 139 aa11.91□□□□□ -0.5
CCHCR1-208ENST00000451521 CT83Q5H943 113 aa11.91□□□□□ -0.5
CCHCR1-208ENST00000451521 C5orf56Q8N8D9 126 aa11.91□□□□□ -0.5
CCHCR1-208ENST00000451521 OR10AG1Q8NH19 301 aa11.91□□□□□ -0.5
CCHCR1-208ENST00000451521 ATP6V0E1O15342 81 aa11.9□□□□□ -0.5
CCHCR1-208ENST00000451521 P01737 135 aa11.9□□□□□ -0.5
CCHCR1-208ENST00000451521 CRYBA4P53673 196 aa11.9□□□□□ -0.5
CCHCR1-208ENST00000451521 CFAP161Q6P656 301 aa11.9□□□□□ -0.5
CCHCR1-208ENST00000451521 MAPK1IP1LQ8NDC0 245 aa11.9□□□□□ -0.5
CCHCR1-208ENST00000451521 RAB37Q96AX2 223 aa11.9□□□□□ -0.5
CCHCR1-208ENST00000451521 FMC1Q96HJ9 113 aa11.9□□□□□ -0.5
CCHCR1-208ENST00000451521 TRBV19A0A075B6N1 114 aa11.9□□□□□ -0.5
CCHCR1-208ENST00000451521 TEX48A0A1B0GUV7 120 aa11.9□□□□□ -0.5
CCHCR1-208ENST00000451521 C19orf71A6NCJ1 209 aa11.9□□□□□ -0.5
CCHCR1-208ENST00000451521 H3BTX0 84 aa11.9□□□□□ -0.5
CCHCR1-208ENST00000451521 RBPMS2Q6ZRY4 209 aaKnown RBP11.9□□□□□ -0.5
CCHCR1-208ENST00000451521 PIFOQ8TCI5 191 aa11.9□□□□□ -0.5
CCHCR1-208ENST00000451521 A0A0G2JLM5 398 aa11.89□□□□□ -0.51
CCHCR1-208ENST00000451521 CHEK1O14757 476 aa11.89□□□□□ -0.51
CCHCR1-208ENST00000451521 CSN3P07498 182 aa11.89□□□□□ -0.51
CCHCR1-208ENST00000451521 CTSGP08311 255 aa11.89□□□□□ -0.51
CCHCR1-208ENST00000451521 FGF6P10767 208 aa11.89□□□□□ -0.51
CCHCR1-208ENST00000451521 GCN1Q92616 2671 aaKnown RBP11.89□□□□□ -0.51
CCHCR1-208ENST00000451521 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.89□□□□□ -0.51
CCHCR1-208ENST00000451521 NCR2O95944 276 aa11.89□□□□□ -0.51
CCHCR1-208ENST00000451521 LTAP01374 205 aa11.89□□□□□ -0.51
CCHCR1-208ENST00000451521 DSCR9P59020 149 aa11.89□□□□□ -0.51
CCHCR1-208ENST00000451521 CKS1BP61024 79 aa11.89□□□□□ -0.51
CCHCR1-208ENST00000451521 LYPD1Q8N2G4 141 aa11.89□□□□□ -0.51
CCHCR1-208ENST00000451521 TRAV40A0A0B4J280 105 aa11.88□□□□□ -0.51
CCHCR1-208ENST00000451521 H3BRM9 83 aa11.88□□□□□ -0.51
CCHCR1-208ENST00000451521 ZNF207O43670 478 aaKnown RBP11.88□□□□□ -0.51
CCHCR1-208ENST00000451521 SCGB2A1O75556 95 aa11.88□□□□□ -0.51
CCHCR1-208ENST00000451521 HSD52Q0P140 79 aa11.88□□□□□ -0.51
CCHCR1-208ENST00000451521 GFRA4Q9GZZ7 299 aa11.88□□□□□ -0.51
CCHCR1-208ENST00000451521 ZNF492Q9P255 531 aa11.88□□□□□ -0.51
CCHCR1-208ENST00000451521 SPCS1Q9Y6A9 102 aa11.88□□□□□ -0.51
CCHCR1-208ENST00000451521 MSMBP08118 114 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms