RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 CACNG7P62955 275 aa10.51□□□□□ -0.73
HERPUD1-204ENST00000439977 NHLH1Q02575 133 aa10.51□□□□□ -0.73
HERPUD1-204ENST00000439977 C21orf62-AS1Q17RA5 79 aa10.51□□□□□ -0.73
HERPUD1-204ENST00000439977 ANKRD39Q53RE8 183 aa10.51□□□□□ -0.73
HERPUD1-204ENST00000439977 PRSS57Q6UWY2 283 aa10.51□□□□□ -0.73
HERPUD1-204ENST00000439977 Q6ZQT7 251 aa10.51□□□□□ -0.73
HERPUD1-204ENST00000439977 PIP4P2Q8N4L2 257 aa10.51□□□□□ -0.73
HERPUD1-204ENST00000439977 EVI2AP22794 236 aa10.51□□□□□ -0.73
HERPUD1-204ENST00000439977 Q6AWC8 147 aa10.51□□□□□ -0.73
HERPUD1-204ENST00000439977 ZNF575Q86XF7 245 aa10.51□□□□□ -0.73
HERPUD1-204ENST00000439977 Q8N6K4 173 aa10.51□□□□□ -0.73
HERPUD1-204ENST00000439977 RNASE8Q8TDE3 154 aaKnown RBP10.51□□□□□ -0.73
HERPUD1-204ENST00000439977 GATA1P15976 413 aaPredicted RBP10.5□□□□□ -0.73
HERPUD1-204ENST00000439977 SAPCD1Q5SSQ6 148 aa10.5□□□□□ -0.73
HERPUD1-204ENST00000439977 ZNF493Q6ZR52 646 aa10.5□□□□□ -0.73
HERPUD1-204ENST00000439977 S100A7AQ86SG5 101 aa10.5□□□□□ -0.73
HERPUD1-204ENST00000439977 TMEM219Q86XT9 240 aa10.5□□□□□ -0.73
HERPUD1-204ENST00000439977 CSMD2Q7Z408 3487 aa10.5□□□□□ -0.73
HERPUD1-204ENST00000439977 IL17RELQ6ZVW7 336 aa10.5□□□□□ -0.73
HERPUD1-204ENST00000439977 TAX1BP3O14907 124 aa10.49□□□□□ -0.73
HERPUD1-204ENST00000439977 SAA4P35542 130 aa10.49□□□□□ -0.73
HERPUD1-204ENST00000439977 UQCRFS1P47985 274 aa10.49□□□□□ -0.73
HERPUD1-204ENST00000439977 CELSR2Q9HCU4 2923 aa10.49□□□□□ -0.73
HERPUD1-204ENST00000439977 KLRB1Q12918 225 aa10.49□□□□□ -0.73
HERPUD1-204ENST00000439977 LY6DQ14210 128 aa10.49□□□□□ -0.73
HERPUD1-204ENST00000439977 OR4C5Q8NGB2 326 aa10.49□□□□□ -0.73
HERPUD1-204ENST00000439977 A0A1B0GW15 77 aa10.48□□□□□ -0.73
HERPUD1-204ENST00000439977 J3KRW8 73 aa10.48□□□□□ -0.73
HERPUD1-204ENST00000439977 BPESC1Q9GZL8 116 aa10.48□□□□□ -0.73
HERPUD1-204ENST00000439977 ITPR1Q14643 2758 aa10.48□□□□□ -0.73
HERPUD1-204ENST00000439977 SIRPDQ9H106 197 aa10.47□□□□□ -0.73
HERPUD1-204ENST00000439977 SPRY2O43597 315 aa10.47□□□□□ -0.73
HERPUD1-204ENST00000439977 BUB3O43684 328 aa10.47□□□□□ -0.73
HERPUD1-204ENST00000439977 AMMECR1LQ6DCA0 310 aa10.47□□□□□ -0.73
HERPUD1-204ENST00000439977 C2orf91Q6ZV80 131 aa10.47□□□□□ -0.73
HERPUD1-204ENST00000439977 GATD1Q8NB37 220 aa10.47□□□□□ -0.73
HERPUD1-204ENST00000439977 ZNF48Q96MX3 618 aaPredicted RBP10.47□□□□□ -0.73
HERPUD1-204ENST00000439977 BMI1P35226 326 aa10.47□□□□□ -0.73
HERPUD1-204ENST00000439977 ZNF502Q8TBZ5 544 aa10.47□□□□□ -0.73
HERPUD1-204ENST00000439977 NAA38Q9BRA0 125 aaKnown RBP10.47□□□□□ -0.73
HERPUD1-204ENST00000439977 DKK2Q9UBU2 259 aa10.47□□□□□ -0.73
HERPUD1-204ENST00000439977 CRYBG3Q68DQ2 2970 aa10.46□□□□□ -0.73
HERPUD1-204ENST00000439977 COX8AP10176 69 aa10.46□□□□□ -0.73
HERPUD1-204ENST00000439977 C12orf54Q6X4T0 127 aa10.46□□□□□ -0.73
HERPUD1-204ENST00000439977 CCDC140Q96MF4 163 aa10.46□□□□□ -0.73
HERPUD1-204ENST00000439977 MS4A6AQ9H2W1 248 aa10.46□□□□□ -0.73
HERPUD1-204ENST00000439977 FABP5P3A8MUU1 101 aa10.46□□□□□ -0.74
HERPUD1-204ENST00000439977 NMUP48645 174 aa10.46□□□□□ -0.74
HERPUD1-204ENST00000439977 EBI3Q14213 229 aa10.46□□□□□ -0.74
HERPUD1-204ENST00000439977 MINOS1Q5TGZ0 78 aa10.46□□□□□ -0.74
HERPUD1-204ENST00000439977 AJUBAQ96IF1 538 aa10.46□□□□□ -0.74
HERPUD1-204ENST00000439977 MINOS1-NBL1R4GNA1 71 aa10.46□□□□□ -0.74
HERPUD1-204ENST00000439977 U3KQK5 164 aa10.46□□□□□ -0.74
HERPUD1-204ENST00000439977 IGHV2-70DA0A0C4DH43 119 aa10.45□□□□□ -0.74
HERPUD1-204ENST00000439977 HBDP02042 147 aa10.45□□□□□ -0.74
HERPUD1-204ENST00000439977 IGLC6P0CF74 106 aa10.45□□□□□ -0.74
HERPUD1-204ENST00000439977 DEFB125Q8N687 156 aa10.45□□□□□ -0.74
HERPUD1-204ENST00000439977 IFI27L1Q96BM0 104 aa10.45□□□□□ -0.74
HERPUD1-204ENST00000439977 ZFAND3Q9H8U3 227 aa10.45□□□□□ -0.74
HERPUD1-204ENST00000439977 C11orf21Q9P2W6 132 aa10.45□□□□□ -0.74
HERPUD1-204ENST00000439977 TRAV26-2A0A0B4J265 109 aa10.45□□□□□ -0.74
HERPUD1-204ENST00000439977 CLPSL1A2RUU4 121 aa10.45□□□□□ -0.74
HERPUD1-204ENST00000439977 HIST1H1AQ02539 215 aaPredicted RBP10.45□□□□□ -0.74
HERPUD1-204ENST00000439977 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.45□□□□□ -0.74
HERPUD1-204ENST00000439977 RNF185Q96GF1 192 aa10.45□□□□□ -0.74
HERPUD1-204ENST00000439977 AGPAT4-IT1Q9H0P7 198 aa10.45□□□□□ -0.74
HERPUD1-204ENST00000439977 SCGB2A1O75556 95 aa10.44□□□□□ -0.74
HERPUD1-204ENST00000439977 DEFB1P60022 68 aa10.44□□□□□ -0.74
HERPUD1-204ENST00000439977 PCP2Q8IVA1 136 aa10.44□□□□□ -0.74
HERPUD1-204ENST00000439977 TTTY13Q9BZ97 58 aa10.44□□□□□ -0.74
HERPUD1-204ENST00000439977 TRGV3P03979 118 aa10.44□□□□□ -0.74
HERPUD1-204ENST00000439977 TM4SF20Q53R12 229 aa10.44□□□□□ -0.74
HERPUD1-204ENST00000439977 C1orf122Q6ZSJ8 110 aa10.44□□□□□ -0.74
HERPUD1-204ENST00000439977 IGKV3D-20A0A0C4DH25 116 aa10.44□□□□□ -0.74
HERPUD1-204ENST00000439977 GOSR1O95249 250 aa10.44□□□□□ -0.74
HERPUD1-204ENST00000439977 LEPP41159 167 aa10.44□□□□□ -0.74
HERPUD1-204ENST00000439977 RNF151Q2KHN1 245 aa10.44□□□□□ -0.74
HERPUD1-204ENST00000439977 BRD3OSQ6XYD6 125 aa10.44□□□□□ -0.74
HERPUD1-204ENST00000439977 FAM110DQ8TAY7 271 aaPredicted RBP10.44□□□□□ -0.74
HERPUD1-204ENST00000439977 TRAV8-6A0A0B4J262 113 aa10.43□□□□□ -0.74
HERPUD1-204ENST00000439977 DTX2Q86UW9 622 aa10.43□□□□□ -0.74
HERPUD1-204ENST00000439977 IGKV3-7A0A075B6H7 116 aa10.43□□□□□ -0.74
HERPUD1-204ENST00000439977 UBE2E1P51965 193 aa10.43□□□□□ -0.74
HERPUD1-204ENST00000439977 PAX8Q06710 450 aa10.43□□□□□ -0.74
HERPUD1-204ENST00000439977 UFC1Q9Y3C8 167 aa10.43□□□□□ -0.74
HERPUD1-204ENST00000439977 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.42□□□□□ -0.743e-7■■■□□ 17.7
HERPUD1-204ENST00000439977 OOSP1A8MZH6 123 aa10.42□□□□□ -0.74
HERPUD1-204ENST00000439977 TNFRSF6BO95407 300 aa10.42□□□□□ -0.74
HERPUD1-204ENST00000439977 IGF1P05019 195 aa10.42□□□□□ -0.74
HERPUD1-204ENST00000439977 FGF6P10767 208 aa10.42□□□□□ -0.74
HERPUD1-204ENST00000439977 SFTPCP11686 197 aa10.42□□□□□ -0.74
HERPUD1-204ENST00000439977 C7orf71A4D174 169 aa10.42□□□□□ -0.74
HERPUD1-204ENST00000439977 TMEM97Q5BJF2 176 aa10.42□□□□□ -0.74
HERPUD1-204ENST00000439977 TRAV8-2A0A0B4J237 113 aa10.41□□□□□ -0.74
HERPUD1-204ENST00000439977 PRSS1P07477 247 aa10.41□□□□□ -0.74
HERPUD1-204ENST00000439977 RPS20P60866 119 aaKnown RBP10.41□□□□□ -0.74
HERPUD1-204ENST00000439977 RAB37Q96AX2 223 aa10.41□□□□□ -0.74
HERPUD1-204ENST00000439977 MAP1LC3AQ9H492 121 aa10.41□□□□□ -0.74
HERPUD1-204ENST00000439977 CENPVL3A0A0U1RRI6 287 aa10.41□□□□□ -0.74
HERPUD1-204ENST00000439977 C19orf84I3L1E1 186 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms