RNA–Protein interactions for RNA: ENST00000433889.1

SCG2-203, Transcript of secretogranin II, humanhuman

TSL 4

Gene SCG2, Length 544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-203ENST00000433889 KNTC1P50748 2209 aa0.38□□□□□ -2.35
SCG2-203ENST00000433889 SYNMO15061 1565 aa0.38□□□□□ -2.35
SCG2-203ENST00000433889 PRORSD1PA6NEY8 169 aa0.38□□□□□ -2.35
SCG2-203ENST00000433889 GABARAPH6UMI1 98 aa0.38□□□□□ -2.35
SCG2-203ENST00000433889 TPT1P13693 172 aaKnown RBP0.38□□□□□ -2.35
SCG2-203ENST00000433889 SDC2P34741 201 aa0.38□□□□□ -2.35
SCG2-203ENST00000433889 SNRPD3P62318 126 aaKnown RBP0.38□□□□□ -2.35
SCG2-203ENST00000433889 QRFPP83859 136 aa0.38□□□□□ -2.35
SCG2-203ENST00000433889 DCUN1D2Q6PH85 259 aa0.38□□□□□ -2.35
SCG2-203ENST00000433889 LYG2Q86SG7 212 aa0.38□□□□□ -2.35
SCG2-203ENST00000433889 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.38□□□□□ -2.35
SCG2-203ENST00000433889 ISOC1Q96CN7 298 aa0.38□□□□□ -2.35
SCG2-203ENST00000433889 RMND5BQ96G75 393 aaPredicted RBP0.38□□□□□ -2.35
SCG2-203ENST00000433889 NUBP2Q9Y5Y2 271 aa0.38□□□□□ -2.35
SCG2-203ENST00000433889 CACNA1EQ15878 2313 aa0.38□□□□□ -2.35
SCG2-203ENST00000433889 TRAPPC8Q9Y2L5 1435 aa0.38□□□□□ -2.35
SCG2-203ENST00000433889 TANC2Q9HCD6 1990 aa0.37□□□□□ -2.35
SCG2-203ENST00000433889 NUP210Q8TEM1 1887 aaPredicted RBP0.37□□□□□ -2.35
SCG2-203ENST00000433889 A0A0J9YY99 117 aa0.37□□□□□ -2.35
SCG2-203ENST00000433889 TRDV1A0A1B0GX56 115 aa0.37□□□□□ -2.35
SCG2-203ENST00000433889 MAP1LC3B2A6NCE7 125 aa0.37□□□□□ -2.35
SCG2-203ENST00000433889 E5RI56 91 aa0.37□□□□□ -2.35
SCG2-203ENST00000433889 CCL4P13236 92 aa0.37□□□□□ -2.35
SCG2-203ENST00000433889 RPS3P23396 243 aaKnown RBP eCLIP0.37□□□□□ -2.35
SCG2-203ENST00000433889 PRR15Q8IV56 129 aa0.37□□□□□ -2.35
SCG2-203ENST00000433889 TEX29Q8N6K0 151 aa0.37□□□□□ -2.35
SCG2-203ENST00000433889 PLAC4Q8WY50 150 aa0.37□□□□□ -2.35
SCG2-203ENST00000433889 CLEC2BQ92478 149 aa0.37□□□□□ -2.35
SCG2-203ENST00000433889 PRELID3AQ96N28 172 aa0.37□□□□□ -2.35
SCG2-203ENST00000433889 PLAC8Q9NZF1 115 aa0.37□□□□□ -2.35
SCG2-203ENST00000433889 ANKRD31Q8N7Z5 1873 aa0.37□□□□□ -2.35
SCG2-203ENST00000433889 TECPR2O15040 1411 aa0.37□□□□□ -2.35
SCG2-203ENST00000433889 NINQ8N4C6 2090 aa0.36□□□□□ -2.35
SCG2-203ENST00000433889 ARL5CA6NH57 179 aa0.36□□□□□ -2.35
SCG2-203ENST00000433889 TMEM238C9JI98 176 aa0.36□□□□□ -2.35
SCG2-203ENST00000433889 PPP5D1E7EU14 171 aa0.36□□□□□ -2.35
SCG2-203ENST00000433889 PRH1P02810 166 aa0.36□□□□□ -2.35
SCG2-203ENST00000433889 PDE6GP18545 87 aa0.36□□□□□ -2.35
SCG2-203ENST00000433889 S100A11P31949 105 aa0.36□□□□□ -2.35
SCG2-203ENST00000433889 CRYBA4P53673 196 aa0.36□□□□□ -2.35
SCG2-203ENST00000433889 CAV3P56539 151 aa0.36□□□□□ -2.35
SCG2-203ENST00000433889 KRTAP21-1Q3LI58 79 aa0.36□□□□□ -2.35
SCG2-203ENST00000433889 PPP1R2P3Q6NXS1 205 aa0.36□□□□□ -2.35
SCG2-203ENST00000433889 STX12Q86Y82 276 aa0.36□□□□□ -2.35
SCG2-203ENST00000433889 LINC00269Q8N2A0 174 aa0.36□□□□□ -2.35
SCG2-203ENST00000433889 C10orf111Q8N326 155 aa0.36□□□□□ -2.35
SCG2-203ENST00000433889 CARD19Q96LW7 228 aa0.36□□□□□ -2.35
SCG2-203ENST00000433889 CIB3Q96Q77 187 aaPredicted RBP0.36□□□□□ -2.35
SCG2-203ENST00000433889 CCDC32Q9BV29 185 aa0.36□□□□□ -2.35
SCG2-203ENST00000433889 LPAR5Q9H1C0 372 aa0.36□□□□□ -2.35
SCG2-203ENST00000433889 IL20Q9NYY1 176 aa0.36□□□□□ -2.35
SCG2-203ENST00000433889 LAMTOR2Q9Y2Q5 125 aa0.36□□□□□ -2.35
SCG2-203ENST00000433889 ANK1P16157 1881 aa0.35□□□□□ -2.35
SCG2-203ENST00000433889 BCL2P10415 239 aa0.35□□□□□ -2.35
SCG2-203ENST00000433889 GNG10P50151 68 aa0.35□□□□□ -2.35
SCG2-203ENST00000433889 MAXP61244 160 aa0.35□□□□□ -2.35
SCG2-203ENST00000433889 LINC00305Q7Z4B0 112 aa0.35□□□□□ -2.35
SCG2-203ENST00000433889 SMR3AQ99954 134 aa0.35□□□□□ -2.35
SCG2-203ENST00000433889 FAM103A1Q9BTL3 118 aaKnown RBP0.35□□□□□ -2.35
SCG2-203ENST00000433889 LRTM1Q9HBL6 345 aa0.35□□□□□ -2.35
SCG2-203ENST00000433889 TAF9BQ9HBM6 251 aa0.35□□□□□ -2.35
SCG2-203ENST00000433889 FKBP11Q9NYL4 201 aa0.35□□□□□ -2.35
SCG2-203ENST00000433889 TRPM7Q96QT4 1865 aa0.35□□□□□ -2.35
SCG2-203ENST00000433889 DSPPQ9NZW4 1301 aa0.35□□□□□ -2.35
SCG2-203ENST00000433889 NAV2Q8IVL1 2488 aa0.35□□□□□ -2.35
SCG2-203ENST00000433889 APCP25054 2843 aa0.34□□□□□ -2.35
SCG2-203ENST00000433889 ASH1LQ9NR48 2969 aaKnown RBP0.34□□□□□ -2.35
SCG2-203ENST00000433889 LOC107986453A0A1B0GWG9 222 aa0.34□□□□□ -2.36
SCG2-203ENST00000433889 A0A1W2PPB8 328 aa0.34□□□□□ -2.36
SCG2-203ENST00000433889 A0A1W2PRS3 328 aa0.34□□□□□ -2.36
SCG2-203ENST00000433889 KIR3DP1A8MWS1 328 aa0.34□□□□□ -2.36
SCG2-203ENST00000433889 IGHV3-30P01768 117 aa0.34□□□□□ -2.36
SCG2-203ENST00000433889 IGHV3-30-5P0DP03 117 aa0.34□□□□□ -2.36
SCG2-203ENST00000433889 CCSMST1Q4G0I0 132 aa0.34□□□□□ -2.36
SCG2-203ENST00000433889 C10orf99Q6UWK7 81 aa0.34□□□□□ -2.36
SCG2-203ENST00000433889 TMEM229BQ8NBD8 167 aa0.34□□□□□ -2.36
SCG2-203ENST00000433889 CCL4L1Q8NHW4 92 aa0.34□□□□□ -2.36
SCG2-203ENST00000433889 DIRC1Q969H9 104 aa0.34□□□□□ -2.36
SCG2-203ENST00000433889 PCBD2Q9H0N5 130 aa0.34□□□□□ -2.36
SCG2-203ENST00000433889 ATG2AQ2TAZ0 1938 aa0.34□□□□□ -2.36
SCG2-203ENST00000433889 KIAA1549LQ6ZVL6 1849 aa0.34□□□□□ -2.36
SCG2-203ENST00000433889 DLC1Q96QB1 1528 aa0.33□□□□□ -2.36
SCG2-203ENST00000433889 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.33□□□□□ -2.36
SCG2-203ENST00000433889 TRAV13-1A0A0B4J241 112 aa0.33□□□□□ -2.36
SCG2-203ENST00000433889 FXYD1O00168 92 aa0.33□□□□□ -2.36
SCG2-203ENST00000433889 EDF1O60869 148 aaKnown RBP0.33□□□□□ -2.36
SCG2-203ENST00000433889 LY6G6CO95867 125 aa0.33□□□□□ -2.36
SCG2-203ENST00000433889 CD3DP04234 171 aa0.33□□□□□ -2.36
SCG2-203ENST00000433889 GYPBP06028 91 aa0.33□□□□□ -2.36
SCG2-203ENST00000433889 SAA1P0DJI8 122 aaPredicted RBP0.33□□□□□ -2.36
SCG2-203ENST00000433889 TCTEX1D1Q8N7M0 179 aa0.33□□□□□ -2.36
SCG2-203ENST00000433889 OR8J3Q8NGG0 315 aa0.33□□□□□ -2.36
SCG2-203ENST00000433889 LXNQ9BS40 222 aa0.33□□□□□ -2.36
SCG2-203ENST00000433889 E7EQ34 232 aa0.32□□□□□ -2.36
SCG2-203ENST00000433889 H7BYZ3 331 aa0.32□□□□□ -2.36
SCG2-203ENST00000433889 PGRMC1O00264 195 aaKnown RBP0.32□□□□□ -2.36
SCG2-203ENST00000433889 FAM107AO95990 144 aa0.32□□□□□ -2.36
SCG2-203ENST00000433889 NEFHP12036 1026 aa0.32□□□□□ -2.36
SCG2-203ENST00000433889 GTF2A1P52655 376 aaPredicted RBP0.32□□□□□ -2.36
SCG2-203ENST00000433889 IQCJQ1A5X6 159 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms