RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 PLEKHB2Q96CS7 222 aa-0.37□□□□□ -2.47
LINC01239-201ENST00000433645 CELSR2Q9HCU4 2923 aa-0.37□□□□□ -2.47
LINC01239-201ENST00000433645 MYH2Q9UKX2 1941 aa-0.37□□□□□ -2.47
LINC01239-201ENST00000433645 FLNCQ14315 2725 aa-0.38□□□□□ -2.47
LINC01239-201ENST00000433645 ATP5HO75947 161 aa-0.38□□□□□ -2.47
LINC01239-201ENST00000433645 GNG5P63218 68 aa-0.38□□□□□ -2.47
LINC01239-201ENST00000433645 MRPS36P82909 103 aaKnown RBP-0.38□□□□□ -2.47
LINC01239-201ENST00000433645 MSMO1Q15800 293 aa-0.38□□□□□ -2.47
LINC01239-201ENST00000433645 OR4C12Q96R67 309 aa-0.38□□□□□ -2.47
LINC01239-201ENST00000433645 PHB2Q99623 299 aa-0.38□□□□□ -2.47
LINC01239-201ENST00000433645 PAIP2Q9BPZ3 127 aaKnown RBP-0.38□□□□□ -2.47
LINC01239-201ENST00000433645 PROK2Q9HC23 129 aa-0.38□□□□□ -2.47
LINC01239-201ENST00000433645 SSR3Q9UNL2 185 aa-0.38□□□□□ -2.47
LINC01239-201ENST00000433645 TPRKBQ9Y3C4 175 aa-0.38□□□□□ -2.47
LINC01239-201ENST00000433645 F8P00451 2351 aa-0.39□□□□□ -2.47
LINC01239-201ENST00000433645 NINQ8N4C6 2090 aa-0.39□□□□□ -2.47
LINC01239-201ENST00000433645 ANK1P16157 1881 aa-0.39□□□□□ -2.47
LINC01239-201ENST00000433645 ATG12O94817 140 aa-0.39□□□□□ -2.47
LINC01239-201ENST00000433645 TMED2Q15363 201 aa-0.39□□□□□ -2.47
LINC01239-201ENST00000433645 IZUMO2Q6UXV1 221 aa-0.39□□□□□ -2.47
LINC01239-201ENST00000433645 AP1S3Q96PC3 154 aa-0.39□□□□□ -2.47
LINC01239-201ENST00000433645 MRPL35Q9NZE8 188 aaKnown RBP-0.39□□□□□ -2.47
LINC01239-201ENST00000433645 ESPL1Q14674 2120 aa-0.4□□□□□ -2.47
LINC01239-201ENST00000433645 NEDD8Q15843 81 aa-0.4□□□□□ -2.47
LINC01239-201ENST00000433645 DHRS4L2Q6PKH6 230 aa-0.4□□□□□ -2.47
LINC01239-201ENST00000433645 TRPM7Q96QT4 1865 aa-0.4□□□□□ -2.47
LINC01239-201ENST00000433645 USP54Q70EL1 1684 aa-0.4□□□□□ -2.47
LINC01239-201ENST00000433645 FABP4P15090 132 aa-0.41□□□□□ -2.48
LINC01239-201ENST00000433645 HSD11B1P28845 292 aa-0.41□□□□□ -2.48
LINC01239-201ENST00000433645 VMO1Q7Z5L0 202 aa-0.41□□□□□ -2.48
LINC01239-201ENST00000433645 NEK7Q8TDX7 302 aa-0.41□□□□□ -2.48
LINC01239-201ENST00000433645 PBDC1Q9BVG4 233 aa-0.41□□□□□ -2.48
LINC01239-201ENST00000433645 AFDNP55196 1824 aaKnown RBP-0.41□□□□□ -2.48
LINC01239-201ENST00000433645 DSPPQ9NZW4 1301 aa-0.41□□□□□ -2.48
LINC01239-201ENST00000433645 MAP2P11137 1827 aaKnown RBP-0.42□□□□□ -2.48
LINC01239-201ENST00000433645 NBDYA0A0U1RRE5 68 aa-0.42□□□□□ -2.48
LINC01239-201ENST00000433645 TMEM210A6NLX4 147 aa-0.42□□□□□ -2.48
LINC01239-201ENST00000433645 TRACP01848 142 aa-0.42□□□□□ -2.48
LINC01239-201ENST00000433645 FXYD3Q14802 87 aa-0.42□□□□□ -2.48
LINC01239-201ENST00000433645 RTL8BQ17RB0 113 aa-0.42□□□□□ -2.48
LINC01239-201ENST00000433645 CCSMST1Q4G0I0 132 aa-0.42□□□□□ -2.48
LINC01239-201ENST00000433645 DIRC1Q969H9 104 aa-0.42□□□□□ -2.48
LINC01239-201ENST00000433645 ISOC1Q96CN7 298 aa-0.42□□□□□ -2.48
LINC01239-201ENST00000433645 LINC00208Q96KT6 92 aa-0.42□□□□□ -2.48
LINC01239-201ENST00000433645 LAMTOR3Q9UHA4 124 aa-0.42□□□□□ -2.48
LINC01239-201ENST00000433645 ABCA2Q9BZC7 2435 aa-0.42□□□□□ -2.48
LINC01239-201ENST00000433645 TANC1Q9C0D5 1861 aa-0.42□□□□□ -2.48
LINC01239-201ENST00000433645 ANKRD31Q8N7Z5 1873 aa-0.43□□□□□ -2.48
LINC01239-201ENST00000433645 TRAPPC8Q9Y2L5 1435 aa-0.43□□□□□ -2.48
LINC01239-201ENST00000433645 MYO7AQ13402 2215 aa-0.43□□□□□ -2.48
LINC01239-201ENST00000433645 KPNA4O00629 521 aaPredicted RBP-0.43□□□□□ -2.48
LINC01239-201ENST00000433645 IGF2P01344 180 aa-0.43□□□□□ -2.48
LINC01239-201ENST00000433645 CAPZBP47756 277 aa-0.43□□□□□ -2.48
LINC01239-201ENST00000433645 SNRPD3P62318 126 aaKnown RBP-0.43□□□□□ -2.48
LINC01239-201ENST00000433645 MRPS25P82663 173 aaKnown RBP-0.43□□□□□ -2.48
LINC01239-201ENST00000433645 HACD4Q5VWC8 232 aa-0.43□□□□□ -2.48
LINC01239-201ENST00000433645 Q5XG85 94 aa-0.43□□□□□ -2.48
LINC01239-201ENST00000433645 C5orf56Q8N8D9 126 aa-0.43□□□□□ -2.48
LINC01239-201ENST00000433645 OR4B1Q8NGF8 309 aa-0.43□□□□□ -2.48
LINC01239-201ENST00000433645 OR5AK2Q8NH90 309 aa-0.43□□□□□ -2.48
LINC01239-201ENST00000433645 CIB3Q96Q77 187 aaPredicted RBP-0.43□□□□□ -2.48
LINC01239-201ENST00000433645 A0A096LNT2 108 aa-0.44□□□□□ -2.48
LINC01239-201ENST00000433645 H3BQV1 296 aa-0.44□□□□□ -2.48
LINC01239-201ENST00000433645 ARF6P62330 175 aa-0.44□□□□□ -2.48
LINC01239-201ENST00000433645 ZNF56Q15929 161 aa-0.44□□□□□ -2.48
LINC01239-201ENST00000433645 SNCBQ16143 134 aa-0.44□□□□□ -2.48
LINC01239-201ENST00000433645 C3orf62Q6ZUJ4 267 aa-0.44□□□□□ -2.48
LINC01239-201ENST00000433645 TCTEX1D1Q8N7M0 179 aa-0.44□□□□□ -2.48
LINC01239-201ENST00000433645 GINS3Q9BRX5 216 aa-0.44□□□□□ -2.48
LINC01239-201ENST00000433645 IL20Q9NYY1 176 aa-0.44□□□□□ -2.48
LINC01239-201ENST00000433645 SPAG17Q6Q759 2223 aa-0.45□□□□□ -2.48
LINC01239-201ENST00000433645 A0A1W2PPB8 328 aa-0.45□□□□□ -2.48
LINC01239-201ENST00000433645 A0A1W2PRS3 328 aa-0.45□□□□□ -2.48
LINC01239-201ENST00000433645 HIGD1CA8MV81 97 aa-0.45□□□□□ -2.48
LINC01239-201ENST00000433645 KIR3DP1A8MWS1 328 aa-0.45□□□□□ -2.48
LINC01239-201ENST00000433645 IFNA1P01562 189 aa-0.45□□□□□ -2.48
LINC01239-201ENST00000433645 MT-ND6P03923 174 aa-0.45□□□□□ -2.48
LINC01239-201ENST00000433645 PPP1R2P41236 205 aa-0.45□□□□□ -2.48
LINC01239-201ENST00000433645 NDUFA6P56556 154 aa-0.45□□□□□ -2.48
LINC01239-201ENST00000433645 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.45□□□□□ -2.48
LINC01239-201ENST00000433645 OR13C6PQ8NH95 151 aa-0.45□□□□□ -2.48
LINC01239-201ENST00000433645 DGCR14Q96DF8 476 aaKnown RBP-0.45□□□□□ -2.48
LINC01239-201ENST00000433645 C19orf12Q9NSK7 152 aa-0.45□□□□□ -2.48
LINC01239-201ENST00000433645 WNK2Q9Y3S1 2297 aa-0.45□□□□□ -2.48
LINC01239-201ENST00000433645 MYH3P11055 1940 aa-0.46□□□□□ -2.48
LINC01239-201ENST00000433645 TANC2Q9HCD6 1990 aa-0.46□□□□□ -2.48
LINC01239-201ENST00000433645 ABCA1O95477 2261 aa-0.46□□□□□ -2.48
LINC01239-201ENST00000433645 C3orf85A0A1B0GTC6 90 aa-0.46□□□□□ -2.48
LINC01239-201ENST00000433645 BBIP1A8MTZ0 92 aa-0.46□□□□□ -2.48
LINC01239-201ENST00000433645 CSN2P05814 226 aa-0.46□□□□□ -2.48
LINC01239-201ENST00000433645 DNAJB13P59910 316 aa-0.46□□□□□ -2.48
LINC01239-201ENST00000433645 CSAG1Q6PB30 78 aa-0.46□□□□□ -2.48
LINC01239-201ENST00000433645 TMEM229BQ8NBD8 167 aa-0.46□□□□□ -2.48
LINC01239-201ENST00000433645 CEP19Q96LK0 163 aa-0.46□□□□□ -2.48
LINC01239-201ENST00000433645 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.47□□□□□ -2.48
LINC01239-201ENST00000433645 CACNA1AO00555 2505 aa-0.47□□□□□ -2.48
LINC01239-201ENST00000433645 ARL5CA6NH57 179 aa-0.47□□□□□ -2.48
LINC01239-201ENST00000433645 SAA1P0DJI8 122 aaPredicted RBP-0.47□□□□□ -2.48
LINC01239-201ENST00000433645 KLKP1Q107X0 134 aa-0.47□□□□□ -2.48
LINC01239-201ENST00000433645 CROCCP2Q86T23 111 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms