RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 SUPT4H1P63272 117 aaKnown RBP4.18□□□□□ -1.74
PTPN4-203ENST00000430976 ZNF876PQ49A33 203 aa4.18□□□□□ -1.74
PTPN4-203ENST00000430976 SLC25A29Q8N8R3 303 aa4.18□□□□□ -1.74
PTPN4-203ENST00000430976 GBF1Q92538 1859 aa4.18□□□□□ -1.74
PTPN4-203ENST00000430976 STATHP02808 62 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 COX6CP09669 75 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 CCL17Q92583 94 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 URB1O60287 2271 aaKnown RBP4.17□□□□□ -1.74
PTPN4-203ENST00000430976 LINC01548A6NM66 108 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 AVPP01185 164 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 IFI27P40305 119 aaPredicted RBP4.17□□□□□ -1.74
PTPN4-203ENST00000430976 UBE2AP49459 152 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 MKXQ8IYA7 352 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 C6orf223Q8N319 242 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 FDCSPQ8NFU4 85 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 TMEM158Q8WZ71 300 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 LY75O60449 1722 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 FAM208AQ9UK61 1670 aaKnown RBP4.17□□□□□ -1.74
PTPN4-203ENST00000430976 MALRD1Q5VYJ5 2156 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 TRGV5A0A0B4J1U4 118 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 C2orf70A6NJV1 201 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 RHOHQ15669 191 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 MORN4Q8NDC4 146 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 ODF3Q96PU9 254 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 PSMG3-AS1Q96PY0 264 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 BRCA1P38398 1863 aaKnown RBP4.17□□□□□ -1.74
PTPN4-203ENST00000430976 M0R378 163 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 DPTQ07507 201 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 LINC00643Q86TS7 51 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 SMRP1Q8NCR6 262 aa4.17□□□□□ -1.74
PTPN4-203ENST00000430976 ARAP2Q8WZ64 1704 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 NHSQ6T4R5 1651 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 IGHV1-24A0A0C4DH33 117 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 K7ENP7 123 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 CCL16O15467 120 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 FXYD7P58549 80 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 LCA10Q71F78 164 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 PRR15Q8IV56 129 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 SLC25A45Q8N413 288 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 FAM60AQ9NP50 221 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 DYNLRB1Q9NP97 96 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 PRO0461Q9UI25 63 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 A0A0D9SEW6 157 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 LY6LH3BQJ8 138 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 MRPS12O15235 138 aaKnown RBP4.16□□□□□ -1.74
PTPN4-203ENST00000430976 FOXS1O43638 330 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 HBDP02042 147 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 ZNF22P17026 224 aaPredicted RBP4.16□□□□□ -1.74
PTPN4-203ENST00000430976 PSMB8P28062 276 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 SMCPP49901 116 aaPredicted RBP4.16□□□□□ -1.74
PTPN4-203ENST00000430976 ORMDL3Q8N138 153 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 FAM216BQ8N7L0 139 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.16□□□□□ -1.74
PTPN4-203ENST00000430976 A0A1W2PQD3 144 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 ZNF80P51504 273 aaPredicted RBP4.16□□□□□ -1.74
PTPN4-203ENST00000430976 HOXA4Q00056 320 aaPredicted RBP4.16□□□□□ -1.74
PTPN4-203ENST00000430976 SPRNQ5BIV9 151 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 FAM104BQ5XKR9 115 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 ZNF818PQ6ZRF7 136 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 Q6ZS52 159 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 SPATA3Q8NHX4 192 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 ITLN1Q8WWA0 313 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 ITLN2Q8WWU7 325 aaPredicted RBP4.16□□□□□ -1.74
PTPN4-203ENST00000430976 X6R8D5 127 aa4.16□□□□□ -1.74
PTPN4-203ENST00000430976 RBBP6Q7Z6E9 1792 aaKnown RBP4.15□□□□□ -1.74
PTPN4-203ENST00000430976 ATXN8Q156A1 80 aa4.15□□□□□ -1.74
PTPN4-203ENST00000430976 SDIM1Q6ZPB5 146 aa4.15□□□□□ -1.74
PTPN4-203ENST00000430976 CHCHD1Q96BP2 118 aaKnown RBP4.15□□□□□ -1.74
PTPN4-203ENST00000430976 RITA1Q96K30 269 aa4.15□□□□□ -1.74
PTPN4-203ENST00000430976 SNURFQ9Y675 71 aa4.15□□□□□ -1.74
PTPN4-203ENST00000430976 KDM3BQ7LBC6 1761 aa4.15□□□□□ -1.75
PTPN4-203ENST00000430976 IGHV3OR15-7A0A075B7D8 119 aa4.15□□□□□ -1.75
PTPN4-203ENST00000430976 TMEM30CPA0ZSE6 113 aa4.15□□□□□ -1.75
PTPN4-203ENST00000430976 C15orf62A8K5M9 175 aa4.15□□□□□ -1.75
PTPN4-203ENST00000430976 IGLV3-27P01718 113 aa4.15□□□□□ -1.75
PTPN4-203ENST00000430976 CD28P10747 220 aa4.15□□□□□ -1.75
PTPN4-203ENST00000430976 PHLDA1Q8WV24 401 aaPredicted RBP4.15□□□□□ -1.75
PTPN4-203ENST00000430976 ARHGAP5-AS1Q96IT6 56 aa4.15□□□□□ -1.75
PTPN4-203ENST00000430976 FAM30AQ9NZY2 134 aa4.15□□□□□ -1.75
PTPN4-203ENST00000430976 TRBV25-1A0A075B6N4 114 aa4.15□□□□□ -1.75
PTPN4-203ENST00000430976 TRAV3A0A0B4J244 114 aa4.15□□□□□ -1.75
PTPN4-203ENST00000430976 ZNF815PA8K554 130 aa4.15□□□□□ -1.75
PTPN4-203ENST00000430976 LINC01619G3V211 115 aa4.15□□□□□ -1.75
PTPN4-203ENST00000430976 NXPH4O95158 308 aa4.15□□□□□ -1.75
PTPN4-203ENST00000430976 PRSS2P07478 247 aa4.15□□□□□ -1.75
PTPN4-203ENST00000430976 EDDM3BP56851 147 aa4.15□□□□□ -1.75
PTPN4-203ENST00000430976 CFHR3Q02985 330 aa4.15□□□□□ -1.75
PTPN4-203ENST00000430976 RPL18Q07020 188 aaKnown RBP4.15□□□□□ -1.75
PTPN4-203ENST00000430976 SBF1O95248 1867 aa4.15□□□□□ -1.75
PTPN4-203ENST00000430976 TOGARAM1Q9Y4F4 1720 aa4.15□□□□□ -1.75
PTPN4-203ENST00000430976 TSC2P49815 1807 aa4.15□□□□□ -1.75
PTPN4-203ENST00000430976 SCO2A0A1W2PP80 73 aa4.14□□□□□ -1.75
PTPN4-203ENST00000430976 A6NED7 52 aa4.14□□□□□ -1.75
PTPN4-203ENST00000430976 Q6ZR03 302 aa4.14□□□□□ -1.75
PTPN4-203ENST00000430976 PROK2Q9HC23 129 aa4.14□□□□□ -1.75
PTPN4-203ENST00000430976 SHANK1Q9Y566 2161 aa4.14□□□□□ -1.75
PTPN4-203ENST00000430976 K7EQD1 137 aa4.14□□□□□ -1.75
PTPN4-203ENST00000430976 HMGN4O00479 90 aa4.14□□□□□ -1.75
PTPN4-203ENST00000430976 DNAL4O96015 105 aa4.14□□□□□ -1.75
PTPN4-203ENST00000430976 CCKP06307 115 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms