RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 GAGE10A6NGK3 116 aa11.86□□□□□ -0.51
SEMA3B-203ENST00000419007 CEACAM3P40198 252 aa11.86□□□□□ -0.51
SEMA3B-203ENST00000419007 ZNF80P51504 273 aaPredicted RBP11.86□□□□□ -0.51
SEMA3B-203ENST00000419007 TM4SF20Q53R12 229 aa11.86□□□□□ -0.51
SEMA3B-203ENST00000419007 PIP4P2Q8N4L2 257 aa11.86□□□□□ -0.51
SEMA3B-203ENST00000419007 COL12A1Q99715 3063 aa11.86□□□□□ -0.51
SEMA3B-203ENST00000419007 RPL7P18124 248 aaKnown RBP11.85□□□□□ -0.51
SEMA3B-203ENST00000419007 NDPQ00604 133 aa11.85□□□□□ -0.51
SEMA3B-203ENST00000419007 PDE6HQ13956 83 aa11.85□□□□□ -0.51
SEMA3B-203ENST00000419007 SAPCD1Q5SSQ6 148 aa11.85□□□□□ -0.51
SEMA3B-203ENST00000419007 IGHV3OR16-13A0A075B7E8 117 aa11.84□□□□□ -0.51
SEMA3B-203ENST00000419007 IGHV3-74A0A0B4J1X5 117 aa11.84□□□□□ -0.51
SEMA3B-203ENST00000419007 H3BUT2 72 aa11.84□□□□□ -0.51
SEMA3B-203ENST00000419007 EVI2AP22794 236 aa11.84□□□□□ -0.51
SEMA3B-203ENST00000419007 PCP2Q8IVA1 136 aa11.84□□□□□ -0.51
SEMA3B-203ENST00000419007 GATD1Q8NB37 220 aa11.84□□□□□ -0.51
SEMA3B-203ENST00000419007 CFHR4Q92496 578 aa11.84□□□□□ -0.51
SEMA3B-203ENST00000419007 DKK2Q9UBU2 259 aa11.84□□□□□ -0.51
SEMA3B-203ENST00000419007 ITPR1Q14643 2758 aa11.84□□□□□ -0.51
SEMA3B-203ENST00000419007 IGLV11-55A0A075B6I3 123 aa11.84□□□□□ -0.51
SEMA3B-203ENST00000419007 IGHV3-66A0A0C4DH42 116 aa11.84□□□□□ -0.51
SEMA3B-203ENST00000419007 A1L4Q6 167 aa11.84□□□□□ -0.51
SEMA3B-203ENST00000419007 SEC11AP67812 179 aa11.84□□□□□ -0.51
SEMA3B-203ENST00000419007 GAS8-AS1O95177 125 aa11.83□□□□□ -0.52
SEMA3B-203ENST00000419007 FGF6P10767 208 aa11.83□□□□□ -0.52
SEMA3B-203ENST00000419007 ERCC8Q13216 396 aa11.83□□□□□ -0.52
SEMA3B-203ENST00000419007 LGALS9BQ3B8N2 356 aa11.83□□□□□ -0.52
SEMA3B-203ENST00000419007 LGALS9CQ6DKI2 356 aa11.83□□□□□ -0.52
SEMA3B-203ENST00000419007 A6NDN8 102 aa11.83□□□□□ -0.52
SEMA3B-203ENST00000419007 F8W735 103 aaPredicted RBP11.83□□□□□ -0.52
SEMA3B-203ENST00000419007 SMAD7O15105 426 aaKnown RBP11.82□□□□□ -0.52
SEMA3B-203ENST00000419007 BMI1P35226 326 aa11.82□□□□□ -0.52
SEMA3B-203ENST00000419007 TIMD4Q96H15 378 aa11.82□□□□□ -0.52
SEMA3B-203ENST00000419007 K7ENP7 123 aa11.82□□□□□ -0.52
SEMA3B-203ENST00000419007 NDUFS7O75251 213 aa11.82□□□□□ -0.52
SEMA3B-203ENST00000419007 ZNF562Q6V9R5 426 aa11.82□□□□□ -0.52
SEMA3B-203ENST00000419007 U3KQK5 164 aa11.82□□□□□ -0.52
SEMA3B-203ENST00000419007 NDUFA3O95167 84 aa11.81□□□□□ -0.52
SEMA3B-203ENST00000419007 PRSS1P07477 247 aa11.81□□□□□ -0.52
SEMA3B-203ENST00000419007 KIR3DS1Q14943 382 aa11.81□□□□□ -0.52
SEMA3B-203ENST00000419007 RNF182Q8N6D2 247 aa11.81□□□□□ -0.52
SEMA3B-203ENST00000419007 NPBQ8NG41 125 aa11.81□□□□□ -0.52
SEMA3B-203ENST00000419007 IGHV3-49A0A0A0MS15 119 aa11.81□□□□□ -0.52
SEMA3B-203ENST00000419007 BOD1L2Q8IYS8 172 aa11.81□□□□□ -0.52
SEMA3B-203ENST00000419007 DYNAPQ8N1N2 210 aa11.81□□□□□ -0.52
SEMA3B-203ENST00000419007 MAP1LC3AQ9H492 121 aa11.81□□□□□ -0.52
SEMA3B-203ENST00000419007 CTSGP08311 255 aa11.8□□□□□ -0.52
SEMA3B-203ENST00000419007 GATA1P15976 413 aaPredicted RBP11.8□□□□□ -0.52
SEMA3B-203ENST00000419007 LEPP41159 167 aa11.8□□□□□ -0.52
SEMA3B-203ENST00000419007 OR11H6Q8NGC7 330 aa11.8□□□□□ -0.52
SEMA3B-203ENST00000419007 TTTY13Q9BZ97 58 aa11.8□□□□□ -0.52
SEMA3B-203ENST00000419007 SMAD5-AS1Q9Y6J3 95 aa11.8□□□□□ -0.52
SEMA3B-203ENST00000419007 ECSCRQ19T08 205 aa11.8□□□□□ -0.52
SEMA3B-203ENST00000419007 OR1N2Q8NGR9 330 aa11.8□□□□□ -0.52
SEMA3B-203ENST00000419007 K7ERU9 68 aa11.8□□□□□ -0.52
SEMA3B-203ENST00000419007 SAP30O75446 220 aa11.8□□□□□ -0.52
SEMA3B-203ENST00000419007 PRAC2D3DTV9 90 aa11.79□□□□□ -0.52
SEMA3B-203ENST00000419007 RPS20P60866 119 aaKnown RBP11.79□□□□□ -0.52
SEMA3B-203ENST00000419007 GTF2H5Q6ZYL4 71 aa11.79□□□□□ -0.52
SEMA3B-203ENST00000419007 LY6G5BQ8NDX9 201 aa11.79□□□□□ -0.52
SEMA3B-203ENST00000419007 JMJD8Q96S16 334 aa11.79□□□□□ -0.52
SEMA3B-203ENST00000419007 VKORC1Q9BQB6 163 aa11.79□□□□□ -0.52
SEMA3B-203ENST00000419007 A0A0G2JLM5 398 aa11.78□□□□□ -0.52
SEMA3B-203ENST00000419007 FABP5P3A8MUU1 101 aa11.78□□□□□ -0.52
SEMA3B-203ENST00000419007 SCGB2A1O75556 95 aa11.78□□□□□ -0.52
SEMA3B-203ENST00000419007 HSD52Q0P140 79 aa11.78□□□□□ -0.52
SEMA3B-203ENST00000419007 HRNRQ86YZ3 2850 aaPredicted RBP11.78□□□□□ -0.52
SEMA3B-203ENST00000419007 C9orf118A6NHY6 69 aa11.78□□□□□ -0.52
SEMA3B-203ENST00000419007 GCSHP23434 173 aa11.78□□□□□ -0.52
SEMA3B-203ENST00000419007 VMO1Q7Z5L0 202 aa11.78□□□□□ -0.52
SEMA3B-203ENST00000419007 TMEM190Q8WZ59 177 aa11.78□□□□□ -0.52
SEMA3B-203ENST00000419007 ZNF207O43670 478 aaKnown RBP11.78□□□□□ -0.52
SEMA3B-203ENST00000419007 PRTN3P24158 256 aa11.78□□□□□ -0.52
SEMA3B-203ENST00000419007 TTC9CQ8N5M4 171 aa11.78□□□□□ -0.52
SEMA3B-203ENST00000419007 OR9G4Q8NGQ1 327 aa11.78□□□□□ -0.52
SEMA3B-203ENST00000419007 MEGF9Q9H1U4 602 aa11.78□□□□□ -0.52
SEMA3B-203ENST00000419007 IGHG4P01861 327 aa11.77□□□□□ -0.52
SEMA3B-203ENST00000419007 IGLC6P0CF74 106 aa11.77□□□□□ -0.52
SEMA3B-203ENST00000419007 IL17RELQ6ZVW7 336 aa11.77□□□□□ -0.52
SEMA3B-203ENST00000419007 DPF1Q92782 380 aa11.77□□□□□ -0.52
SEMA3B-203ENST00000419007 H3BRM9 83 aa11.77□□□□□ -0.53
SEMA3B-203ENST00000419007 TNFRSF6BO95407 300 aa11.77□□□□□ -0.53
SEMA3B-203ENST00000419007 C15orf32Q32M92 178 aa11.77□□□□□ -0.53
SEMA3B-203ENST00000419007 PPBPP02775 128 aa11.77□□□□□ -0.53
SEMA3B-203ENST00000419007 CLEC3BP05452 202 aa11.77□□□□□ -0.53
SEMA3B-203ENST00000419007 CCL21O00585 134 aa11.76□□□□□ -0.53
SEMA3B-203ENST00000419007 CCDC144NLQ6NUI1 221 aa11.76□□□□□ -0.53
SEMA3B-203ENST00000419007 OR2K2Q8NGT1 345 aa11.76□□□□□ -0.53
SEMA3B-203ENST00000419007 RNF185Q96GF1 192 aa11.76□□□□□ -0.53
SEMA3B-203ENST00000419007 FOXC2Q99958 501 aa11.76□□□□□ -0.53
SEMA3B-203ENST00000419007 UFC1Q9Y3C8 167 aa11.76□□□□□ -0.53
SEMA3B-203ENST00000419007 PAX8Q06710 450 aa11.76□□□□□ -0.53
SEMA3B-203ENST00000419007 SMIM15Q7Z3B0 74 aa11.76□□□□□ -0.53
SEMA3B-203ENST00000419007 OR4X2Q8NGF9 303 aa11.76□□□□□ -0.53
SEMA3B-203ENST00000419007 IGKV2D-26A0A0A0MRZ7 120 aa11.75□□□□□ -0.53
SEMA3B-203ENST00000419007 RIPPLY3P57055 190 aa11.75□□□□□ -0.53
SEMA3B-203ENST00000419007 ADAMTSL5Q6ZMM2 481 aa11.75□□□□□ -0.53
SEMA3B-203ENST00000419007 LY6DQ14210 128 aa11.75□□□□□ -0.53
SEMA3B-203ENST00000419007 GTSCR1Q86UQ5 136 aa11.75□□□□□ -0.53
SEMA3B-203ENST00000419007 TMEM158Q8WZ71 300 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms