RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 SCRT2Q9NQ03 307 aa9.1□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 A0A087X0K7 114 aa9.09□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 PPBPP02775 128 aa9.09□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 CACNG7P62955 275 aa9.09□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 ZNF502Q8TBZ5 544 aa9.09□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 SIRPDQ9H106 197 aa9.09□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 BSNQ9UPA5 3926 aa9.09□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 G3V318 75 aa9.09□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 TCTAP57738 103 aa9.09□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 RNF182Q8N6D2 247 aa9.09□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 BPESC1Q9GZL8 116 aa9.09□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 PPIFP30405 207 aaKnown RBP9.09□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 ZNF80P51504 273 aaPredicted RBP9.09□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 FAM106AQ4KMX7 169 aa9.09□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 IFI27L1Q96BM0 104 aa9.09□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 SMAD5-AS1Q9Y6J3 95 aa9.08□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 BUB3O43684 328 aa9.08□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 NPYP01303 97 aa9.08□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 COX8AP10176 69 aa9.08□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 ATP5G2Q06055 141 aa9.08□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 LOXL1Q08397 574 aaPredicted RBP9.08□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 BVES-AS1Q5T3Y7 98 aa9.08□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 ERASQ7Z444 233 aa9.08□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 COL25A1Q9BXS0 654 aaPredicted RBP9.08□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 C18orf15Q96N68 181 aa9.08□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 NPFFO15130 113 aa9.07□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 CCL25O15444 150 aa9.07□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 PRSS1P07477 247 aa9.07□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 PRSS57Q6UWY2 283 aa9.07□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 WFDC3Q8IUB2 231 aa9.07□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 UFC1Q9Y3C8 167 aa9.07□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 TRBV7-1A0A0A6YYK4 115 aa9.07□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 IL17RELQ6ZVW7 336 aa9.07□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 C16orf92Q96LL3 132 aa9.07□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 NMUP48645 174 aa9.07□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 LGALS9BQ3B8N2 356 aa9.07□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 LGALS9CQ6DKI2 356 aa9.07□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 IGHV3OR16-10A0A075B7F0 116 aa9.06□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 PRAC2D3DTV9 90 aa9.06□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 LY6DQ14210 128 aa9.06□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 COX8CQ7Z4L0 72 aa9.06□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 TMEM219Q86XT9 240 aa9.06□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 MSRB1Q9NZV6 116 aa9.06□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 U3KQK5 164 aa9.06□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 RPL11P62913 178 aaKnown RBP9.06□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 SPANXN1Q5VSR9 72 aa9.06□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 NXT2Q9NPJ8 142 aaKnown RBP9.06□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 IGLC6P0CF74 106 aa9.06□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 PPP1R14DQ9NXH3 145 aa9.06□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 CENPVL3A0A0U1RRI6 287 aa9.05□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 OVOL3O00110 214 aa9.05□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 EVI2AP22794 236 aa9.05□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 LEPP41159 167 aa9.05□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 RBAKDNA6NC62 111 aa9.05□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.05□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 DEFB125Q8N687 156 aa9.05□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 OR1N2Q8NGR9 330 aa9.05□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 LINC00527Q9UJ94 153 aa9.05□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 NCOR2Q9Y618 2525 aa9.05□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 RELNP78509 3460 aa9.05□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 A6NDN8 102 aa9.05□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 TRGV3P03979 118 aa9.05□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 TMEM97Q5BJF2 176 aa9.05□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 ZFAND3Q9H8U3 227 aa9.05□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 A0A1W2PPR1 153 aa9.04□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 TNFRSF6BO95407 300 aa9.04□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 UQCRFS1P47985 274 aa9.04□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 PAX8Q06710 450 aa9.04□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 AGPAT4-IT1Q9H0P7 198 aa9.04□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 TRAV41A0A0B4J266 112 aa9.04□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 A1L4Q6 167 aa9.04□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 CD5LO43866 347 aa9.04□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 SRSF2Q01130 221 aaKnown RBP9.04□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 C8orf86Q6ZUL3 223 aa9.04□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 HIF1ANQ9NWT6 349 aa9.04□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 HIVEP3Q5T1R4 2406 aa9.04□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 SPTBN4Q9H254 2564 aa9.04□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 J3KRW8 73 aa9.04□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 IGHG4P01861 327 aa9.04□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 SFTPCP11686 197 aa9.04□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 LINC01559Q495D7 138 aa9.04□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 CCDC140Q96MF4 163 aa9.04□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 PEF1Q9UBV8 284 aaKnown RBP9.04□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 MOB4Q9Y3A3 225 aa9.04□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 LINC01548A6NM66 108 aa9.03□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 S100A4P26447 101 aaKnown RBP9.03□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 SEC11AP67812 179 aa9.03□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 ANKRD39Q53RE8 183 aa9.03□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 A0A096LNJ9 63 aa9.03□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 C7orf71A4D174 169 aa9.03□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 LMO4P61968 165 aa9.03□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 DPF1Q92782 380 aa9.03□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 CHD8Q9HCK8 2581 aa9.03□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 TAX1BP3O14907 124 aa9.03□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 ARL3P36405 182 aa9.03□□□□□ -0.96
CSPG4P3Y-201ENST00000418188 AMMECR1LQ6DCA0 310 aa9.02□□□□□ -0.97
CSPG4P3Y-201ENST00000418188 PIP4P2Q8N4L2 257 aa9.02□□□□□ -0.97
CSPG4P3Y-201ENST00000418188 C5orf56Q8N8D9 126 aa9.02□□□□□ -0.97
CSPG4P3Y-201ENST00000418188 OR9G4Q8NGQ1 327 aa9.02□□□□□ -0.97
CSPG4P3Y-201ENST00000418188 FCER1GP30273 86 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms