RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 H0Y8G0 127 aa12.28□□□□□ -0.44
HOXD3-202ENST00000410016 Q6ZVH6 145 aa12.28□□□□□ -0.44
HOXD3-202ENST00000410016 ORMDL3Q8N138 153 aa12.28□□□□□ -0.44
HOXD3-202ENST00000410016 PIP4P2Q8N4L2 257 aa12.28□□□□□ -0.44
HOXD3-202ENST00000410016 ORAOV1Q8WV07 137 aa12.28□□□□□ -0.44
HOXD3-202ENST00000410016 CCDC140Q96MF4 163 aa12.28□□□□□ -0.44
HOXD3-202ENST00000410016 PRELID3AQ96N28 172 aa12.28□□□□□ -0.44
HOXD3-202ENST00000410016 UBTD1Q9HAC8 227 aa12.28□□□□□ -0.44
HOXD3-202ENST00000410016 TIMM8BQ9Y5J9 83 aaPredicted RBP12.28□□□□□ -0.44
HOXD3-202ENST00000410016 A0A087X0K7 114 aa12.27□□□□□ -0.44
HOXD3-202ENST00000410016 PRAC2D3DTV9 90 aa12.27□□□□□ -0.44
HOXD3-202ENST00000410016 G3V318 75 aa12.27□□□□□ -0.44
HOXD3-202ENST00000410016 NCR2O95944 276 aa12.27□□□□□ -0.44
HOXD3-202ENST00000410016 PAX8Q06710 450 aa12.27□□□□□ -0.44
HOXD3-202ENST00000410016 FER1L6-AS1Q8NA97 138 aa12.27□□□□□ -0.44
HOXD3-202ENST00000410016 RNASE8Q8TDE3 154 aaKnown RBP12.27□□□□□ -0.44
HOXD3-202ENST00000410016 BPESC1Q9GZL8 116 aa12.27□□□□□ -0.44
HOXD3-202ENST00000410016 CENPVL3A0A0U1RRI6 287 aa12.27□□□□□ -0.45
HOXD3-202ENST00000410016 LOC389332A0A1B0GUA5 103 aa12.27□□□□□ -0.45
HOXD3-202ENST00000410016 S100A7P31151 101 aa12.27□□□□□ -0.45
HOXD3-202ENST00000410016 RPS20P60866 119 aaKnown RBP12.27□□□□□ -0.45
HOXD3-202ENST00000410016 SRSF2Q01130 221 aaKnown RBP12.27□□□□□ -0.45
HOXD3-202ENST00000410016 MS4A6AQ9H2W1 248 aa12.27□□□□□ -0.45
HOXD3-202ENST00000410016 ERCC8Q13216 396 aa12.26□□□□□ -0.45
HOXD3-202ENST00000410016 TMEM95Q3KNT9 176 aa12.26□□□□□ -0.45
HOXD3-202ENST00000410016 CFAP161Q6P656 301 aa12.26□□□□□ -0.45
HOXD3-202ENST00000410016 SLC25A34Q6PIV7 304 aa12.26□□□□□ -0.45
HOXD3-202ENST00000410016 SPTBN4Q9H254 2564 aa12.26□□□□□ -0.45
HOXD3-202ENST00000410016 RAB9AP51151 201 aa12.26□□□□□ -0.45
HOXD3-202ENST00000410016 MPV17L2Q567V2 206 aa12.26□□□□□ -0.45
HOXD3-202ENST00000410016 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.26□□□□□ -0.45
HOXD3-202ENST00000410016 CNFNQ9BYD5 112 aa12.26□□□□□ -0.45
HOXD3-202ENST00000410016 COX11Q9Y6N1 276 aa12.26□□□□□ -0.45
HOXD3-202ENST00000410016 TCF21O43680 179 aa12.25□□□□□ -0.45
HOXD3-202ENST00000410016 TWIST1Q15672 202 aa12.25□□□□□ -0.45
HOXD3-202ENST00000410016 CLEC19AQ6UXS0 136 aa12.25□□□□□ -0.45
HOXD3-202ENST00000410016 RNF182Q8N6D2 247 aa12.25□□□□□ -0.45
HOXD3-202ENST00000410016 AKAP6Q13023 2319 aa12.25□□□□□ -0.45
HOXD3-202ENST00000410016 FABP5P3A8MUU1 101 aa12.25□□□□□ -0.45
HOXD3-202ENST00000410016 LY6DQ14210 128 aa12.25□□□□□ -0.45
HOXD3-202ENST00000410016 MSRB1Q9NZV6 116 aa12.25□□□□□ -0.45
HOXD3-202ENST00000410016 GOSR1O95249 250 aa12.24□□□□□ -0.45
HOXD3-202ENST00000410016 NHLH1Q02575 133 aa12.24□□□□□ -0.45
HOXD3-202ENST00000410016 IGHV3-66A0A0C4DH42 116 aa12.23□□□□□ -0.45
HOXD3-202ENST00000410016 RBAKDNA6NC62 111 aa12.23□□□□□ -0.45
HOXD3-202ENST00000410016 SMKR1H3BMG3 65 aa12.23□□□□□ -0.45
HOXD3-202ENST00000410016 NPFFO15130 113 aa12.23□□□□□ -0.45
HOXD3-202ENST00000410016 NPYP01303 97 aa12.23□□□□□ -0.45
HOXD3-202ENST00000410016 ORM1P02763 201 aa12.23□□□□□ -0.45
HOXD3-202ENST00000410016 VPS13CQ709C8 3753 aa12.23□□□□□ -0.45
HOXD3-202ENST00000410016 CKS2P33552 79 aa12.23□□□□□ -0.45
HOXD3-202ENST00000410016 C5orf56Q8N8D9 126 aa12.23□□□□□ -0.45
HOXD3-202ENST00000410016 RNF185Q96GF1 192 aa12.23□□□□□ -0.45
HOXD3-202ENST00000410016 NCOR2Q9Y618 2525 aa12.23□□□□□ -0.45
HOXD3-202ENST00000410016 NUDT3O95989 172 aa12.22□□□□□ -0.45
HOXD3-202ENST00000410016 LINC01559Q495D7 138 aa12.22□□□□□ -0.45
HOXD3-202ENST00000410016 ZNF738Q8NE65 137 aa12.22□□□□□ -0.45
HOXD3-202ENST00000410016 ITLN2Q8WWU7 325 aaPredicted RBP12.22□□□□□ -0.45
HOXD3-202ENST00000410016 CHD8Q9HCK8 2581 aa12.22□□□□□ -0.45
HOXD3-202ENST00000410016 IGHV3OR16-13A0A075B7E8 117 aa12.22□□□□□ -0.45
HOXD3-202ENST00000410016 IGHV3-74A0A0B4J1X5 117 aa12.22□□□□□ -0.45
HOXD3-202ENST00000410016 TRAV8-2A0A0B4J237 113 aa12.22□□□□□ -0.45
HOXD3-202ENST00000410016 C19orf84I3L1E1 186 aa12.22□□□□□ -0.45
HOXD3-202ENST00000410016 CCL25O15444 150 aa12.22□□□□□ -0.45
HOXD3-202ENST00000410016 BVES-AS1Q5T3Y7 98 aa12.22□□□□□ -0.45
HOXD3-202ENST00000410016 IL17RELQ6ZVW7 336 aa12.22□□□□□ -0.45
HOXD3-202ENST00000410016 SLC50A1Q9BRV3 221 aa12.22□□□□□ -0.45
HOXD3-202ENST00000410016 TRBV7-1A0A0A6YYK4 115 aa12.21□□□□□ -0.45
HOXD3-202ENST00000410016 TMEM238C9JI98 176 aa12.21□□□□□ -0.45
HOXD3-202ENST00000410016 FXYD7P58549 80 aa12.21□□□□□ -0.45
HOXD3-202ENST00000410016 OR8A1Q8NGG7 326 aa12.21□□□□□ -0.45
HOXD3-202ENST00000410016 AGPAT4-IT1Q9H0P7 198 aa12.21□□□□□ -0.45
HOXD3-202ENST00000410016 U3KQE9 123 aa12.21□□□□□ -0.45
HOXD3-202ENST00000410016 COX8AP10176 69 aa12.21□□□□□ -0.46
HOXD3-202ENST00000410016 EEF1AKMT3Q96AZ1 226 aa12.21□□□□□ -0.46
HOXD3-202ENST00000410016 CELSR1Q9NYQ6 3014 aa12.2□□□□□ -0.46
HOXD3-202ENST00000410016 IGKV3D-20A0A0C4DH25 116 aa12.2□□□□□ -0.46
HOXD3-202ENST00000410016 GAS8-AS1O95177 125 aa12.2□□□□□ -0.46
HOXD3-202ENST00000410016 FOXE3Q13461 319 aa12.2□□□□□ -0.46
HOXD3-202ENST00000410016 PRSS57Q6UWY2 283 aa12.2□□□□□ -0.46
HOXD3-202ENST00000410016 ITPR1Q14643 2758 aa12.2□□□□□ -0.46
HOXD3-202ENST00000410016 HBDP02042 147 aa12.2□□□□□ -0.46
HOXD3-202ENST00000410016 LGALS9BQ3B8N2 356 aa12.2□□□□□ -0.46
HOXD3-202ENST00000410016 C19orf54Q5BKX5 351 aa12.2□□□□□ -0.46
HOXD3-202ENST00000410016 LGALS9CQ6DKI2 356 aa12.2□□□□□ -0.46
HOXD3-202ENST00000410016 C11orf21Q9P2W6 132 aa12.2□□□□□ -0.46
HOXD3-202ENST00000410016 IGHV3-49A0A0A0MS15 119 aa12.19□□□□□ -0.46
HOXD3-202ENST00000410016 UBE2V1Q13404 147 aa12.19□□□□□ -0.46
HOXD3-202ENST00000410016 PIFOQ8TCI5 191 aa12.19□□□□□ -0.46
HOXD3-202ENST00000410016 LINC01546A6NGU7 62 aa12.19□□□□□ -0.46
HOXD3-202ENST00000410016 ZNF207O43670 478 aaKnown RBP12.19□□□□□ -0.46
HOXD3-202ENST00000410016 C12orf54Q6X4T0 127 aa12.19□□□□□ -0.46
HOXD3-202ENST00000410016 C2orf91Q6ZV80 131 aa12.19□□□□□ -0.46
HOXD3-202ENST00000410016 TMEM219Q86XT9 240 aa12.19□□□□□ -0.46
HOXD3-202ENST00000410016 DPF1Q92782 380 aa12.19□□□□□ -0.46
HOXD3-202ENST00000410016 METTL26Q96S19 204 aa12.19□□□□□ -0.46
HOXD3-202ENST00000410016 NPFFR1Q9GZQ6 430 aa12.19□□□□□ -0.46
HOXD3-202ENST00000410016 PPIFP30405 207 aaKnown RBP12.18□□□□□ -0.46
HOXD3-202ENST00000410016 UQCRFS1P47985 274 aa12.18□□□□□ -0.46
HOXD3-202ENST00000410016 PTTG1IPP53801 180 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 235.1 ms