RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 SPOCK3Q9BQ16 436 aa6.77□□□□□ -1.33
SCN9A-203ENST00000409672 SHISA3A0PJX4 238 aa6.77□□□□□ -1.33
SCN9A-203ENST00000409672 NDUFS8O00217 210 aa6.77□□□□□ -1.33
SCN9A-203ENST00000409672 GAS1P54826 345 aa6.77□□□□□ -1.33
SCN9A-203ENST00000409672 TREML4Q6UXN2 200 aa6.77□□□□□ -1.33
SCN9A-203ENST00000409672 HLA-DRB4P13762 266 aa6.77□□□□□ -1.33
SCN9A-203ENST00000409672 GAGE2BQ13066 116 aa6.77□□□□□ -1.33
SCN9A-203ENST00000409672 GTSF1LQ9H1H1 148 aa6.77□□□□□ -1.33
SCN9A-203ENST00000409672 HLA-DRB4X5D2U9 266 aa6.77□□□□□ -1.33
SCN9A-203ENST00000409672 TP53TG1Q9Y2A0 90 aa6.77□□□□□ -1.33
SCN9A-203ENST00000409672 WFDC1Q9HC57 220 aa6.77□□□□□ -1.33
SCN9A-203ENST00000409672 F6UB75 175 aa6.77□□□□□ -1.33
SCN9A-203ENST00000409672 K7EM74 188 aa6.77□□□□□ -1.33
SCN9A-203ENST00000409672 CRYGCP07315 174 aa6.77□□□□□ -1.33
SCN9A-203ENST00000409672 CCL18P55774 89 aa6.77□□□□□ -1.33
SCN9A-203ENST00000409672 C5orf47Q569G3 176 aa6.77□□□□□ -1.33
SCN9A-203ENST00000409672 IGLV3-12A0A075B6K2 115 aa6.77□□□□□ -1.33
SCN9A-203ENST00000409672 PROP1O75360 226 aa6.77□□□□□ -1.33
SCN9A-203ENST00000409672 GP9P14770 177 aa6.77□□□□□ -1.33
SCN9A-203ENST00000409672 DSCR8Q96T75 97 aa6.77□□□□□ -1.33
SCN9A-203ENST00000409672 NTF4P34130 210 aa6.76□□□□□ -1.33
SCN9A-203ENST00000409672 NUP35Q8NFH5 326 aa6.76□□□□□ -1.33
SCN9A-203ENST00000409672 MYMXA0A1B0GTQ4 84 aa6.76□□□□□ -1.33
SCN9A-203ENST00000409672 CRYGSP22914 178 aa6.76□□□□□ -1.33
SCN9A-203ENST00000409672 C9orf139Q6ZV77 190 aa6.76□□□□□ -1.33
SCN9A-203ENST00000409672 A0A1B0GW15 77 aa6.76□□□□□ -1.33
SCN9A-203ENST00000409672 A0A1W2PRE2 83 aa6.76□□□□□ -1.33
SCN9A-203ENST00000409672 LINC00587B1AMM8 73 aa6.76□□□□□ -1.33
SCN9A-203ENST00000409672 CD5P06127 495 aa6.76□□□□□ -1.33
SCN9A-203ENST00000409672 TIRAPP58753 221 aa6.76□□□□□ -1.33
SCN9A-203ENST00000409672 FANCD2OSQ96PS1 177 aa6.76□□□□□ -1.33
SCN9A-203ENST00000409672 DSCAMO60469 2012 aa6.76□□□□□ -1.33
SCN9A-203ENST00000409672 IGHV4-30-2A0A087WSY4 118 aa6.76□□□□□ -1.33
SCN9A-203ENST00000409672 TMEM213A2RRL7 107 aa6.76□□□□□ -1.33
SCN9A-203ENST00000409672 FAM90A2PQ658T7 463 aa6.76□□□□□ -1.33
SCN9A-203ENST00000409672 SEM1Q6ZVN7 128 aa6.76□□□□□ -1.33
SCN9A-203ENST00000409672 C9JAW5 83 aa6.76□□□□□ -1.33
SCN9A-203ENST00000409672 C15orf53Q8NAA6 179 aa6.76□□□□□ -1.33
SCN9A-203ENST00000409672 RNF138Q8WVD3 245 aa6.76□□□□□ -1.33
SCN9A-203ENST00000409672 BAALCQ8WXS3 180 aa6.76□□□□□ -1.33
SCN9A-203ENST00000409672 ZNF479Q96JC4 524 aa6.76□□□□□ -1.33
SCN9A-203ENST00000409672 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.75□□□□□ -1.33
SCN9A-203ENST00000409672 IGKV2-29A2NJV5 120 aaPredicted RBP6.75□□□□□ -1.33
SCN9A-203ENST00000409672 IGHV4-38-2P0DP08 117 aa6.75□□□□□ -1.33
SCN9A-203ENST00000409672 GATA3P23771 443 aa6.75□□□□□ -1.33
SCN9A-203ENST00000409672 TRPT1Q86TN4 253 aaKnown RBP6.75□□□□□ -1.33
SCN9A-203ENST00000409672 TPSG1Q9NRR2 321 aa6.75□□□□□ -1.33
SCN9A-203ENST00000409672 NOTCH4Q99466 2003 aa6.75□□□□□ -1.33
SCN9A-203ENST00000409672 DIAPH2-AS1Q14236 149 aa6.75□□□□□ -1.33
SCN9A-203ENST00000409672 GUSBP1Q15486 140 aa6.75□□□□□ -1.33
SCN9A-203ENST00000409672 FLVCR1-AS1Q8TAF5 88 aa6.75□□□□□ -1.33
SCN9A-203ENST00000409672 TSKUQ8WUA8 353 aa6.75□□□□□ -1.33
SCN9A-203ENST00000409672 CREBBPQ92793 2442 aa6.75□□□□□ -1.33
SCN9A-203ENST00000409672 C9orf66Q5T8R8 295 aa6.75□□□□□ -1.33
SCN9A-203ENST00000409672 PRSS57Q6UWY2 283 aa6.75□□□□□ -1.33
SCN9A-203ENST00000409672 C5orf38Q86SI9 138 aa6.75□□□□□ -1.33
SCN9A-203ENST00000409672 GLRX5Q86SX6 157 aa6.75□□□□□ -1.33
SCN9A-203ENST00000409672 BCL6BQ8N143 479 aaPredicted RBP6.75□□□□□ -1.33
SCN9A-203ENST00000409672 M0R2N4 97 aa6.75□□□□□ -1.33
SCN9A-203ENST00000409672 UBE2AP49459 152 aa6.75□□□□□ -1.33
SCN9A-203ENST00000409672 PLEKHB2Q96CS7 222 aa6.75□□□□□ -1.33
SCN9A-203ENST00000409672 U3KQE9 123 aa6.75□□□□□ -1.33
SCN9A-203ENST00000409672 LTBP1Q14766 1721 aa6.75□□□□□ -1.33
SCN9A-203ENST00000409672 A0A1W2PPI3 338 aa6.74□□□□□ -1.33
SCN9A-203ENST00000409672 NPBQ8NG41 125 aa6.74□□□□□ -1.33
SCN9A-203ENST00000409672 TRGV9Q99603 122 aa6.74□□□□□ -1.33
SCN9A-203ENST00000409672 CRLF1O75462 422 aa6.74□□□□□ -1.33
SCN9A-203ENST00000409672 LINC00271P0C7V0 271 aa6.74□□□□□ -1.33
SCN9A-203ENST00000409672 DNAJC30Q96LL9 226 aa6.74□□□□□ -1.33
SCN9A-203ENST00000409672 RNASE2P10153 161 aaKnown RBP6.74□□□□□ -1.33
SCN9A-203ENST00000409672 CHKB-CPT1BH3BT56 60 aa6.74□□□□□ -1.33
SCN9A-203ENST00000409672 RNF126Q9BV68 326 aa6.74□□□□□ -1.33
SCN9A-203ENST00000409672 C1orf43Q9BWL3 253 aa6.74□□□□□ -1.33
SCN9A-203ENST00000409672 SEC11AP67812 179 aa6.74□□□□□ -1.33
SCN9A-203ENST00000409672 DEFB135Q30KP9 77 aa6.74□□□□□ -1.33
SCN9A-203ENST00000409672 STPG4Q8N801 248 aa6.74□□□□□ -1.33
SCN9A-203ENST00000409672 HLA-DMBP28068 263 aa6.74□□□□□ -1.33
SCN9A-203ENST00000409672 FAM90A9PA6NNJ1 464 aa6.73□□□□□ -1.33
SCN9A-203ENST00000409672 SIPA1L1O43166 1804 aa6.73□□□□□ -1.33
SCN9A-203ENST00000409672 GYPEP15421 78 aa6.73□□□□□ -1.33
SCN9A-203ENST00000409672 CDKN1BP46527 198 aa6.73□□□□□ -1.33
SCN9A-203ENST00000409672 LY6G5BQ8NDX9 201 aa6.73□□□□□ -1.33
SCN9A-203ENST00000409672 TMEM131Q92545 1883 aa6.73□□□□□ -1.33
SCN9A-203ENST00000409672 PPBPP02775 128 aa6.73□□□□□ -1.33
SCN9A-203ENST00000409672 IGFBP3P17936 291 aaPredicted RBP6.73□□□□□ -1.33
SCN9A-203ENST00000409672 TM2D2Q9BX73 214 aa6.73□□□□□ -1.33
SCN9A-203ENST00000409672 I3L3M4 83 aa6.73□□□□□ -1.33
SCN9A-203ENST00000409672 AGMATQ9BSE5 352 aa6.73□□□□□ -1.33
SCN9A-203ENST00000409672 GNRH2O43555 120 aa6.73□□□□□ -1.33
SCN9A-203ENST00000409672 HS3ST6Q96QI5 342 aa6.73□□□□□ -1.33
SCN9A-203ENST00000409672 IGHV1OR15-1A0A075B7D0 117 aa6.73□□□□□ -1.33
SCN9A-203ENST00000409672 TMEM170AQ8WVE7 144 aa6.73□□□□□ -1.33
SCN9A-203ENST00000409672 CHAC1Q9BUX1 264 aa6.72□□□□□ -1.33
SCN9A-203ENST00000409672 PCP4P48539 62 aa6.72□□□□□ -1.33
SCN9A-203ENST00000409672 KLK5Q9Y337 293 aaPredicted RBP6.72□□□□□ -1.33
SCN9A-203ENST00000409672 NHLRC3Q5JS37 347 aa6.72□□□□□ -1.33
SCN9A-203ENST00000409672 HOXB4P17483 251 aaPredicted RBP6.72□□□□□ -1.33
SCN9A-203ENST00000409672 WDR86Q86TI4 376 aa6.72□□□□□ -1.33
SCN9A-203ENST00000409672 RNF183Q96D59 192 aa6.72□□□□□ -1.33
SCN9A-203ENST00000409672 FAM110AQ9BQ89 295 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms