RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 LYNX1P0DP58 116 aa1.28□□□□□ -2.2
HMGB1P17-201ENST00000403495 SLC25A4P12235 298 aa1.28□□□□□ -2.2
HMGB1P17-201ENST00000403495 COX7CP15954 63 aa1.28□□□□□ -2.2
HMGB1P17-201ENST00000403495 HIST1H1BP16401 226 aaKnown RBP1.28□□□□□ -2.2
HMGB1P17-201ENST00000403495 ETV6P41212 452 aa1.28□□□□□ -2.2
HMGB1P17-201ENST00000403495 SNRPD3P62318 126 aaKnown RBP1.28□□□□□ -2.2
HMGB1P17-201ENST00000403495 QRFPP83859 136 aa1.28□□□□□ -2.2
HMGB1P17-201ENST00000403495 CASC2Q6XLA1 102 aa1.28□□□□□ -2.2
HMGB1P17-201ENST00000403495 LINC00269Q8N2A0 174 aa1.28□□□□□ -2.2
HMGB1P17-201ENST00000403495 OR10AG1Q8NH19 301 aa1.28□□□□□ -2.2
HMGB1P17-201ENST00000403495 NABP2Q9BQ15 211 aa1.28□□□□□ -2.2
HMGB1P17-201ENST00000403495 OVOS2A0A0J9YW53 1432 aa1.28□□□□□ -2.2
HMGB1P17-201ENST00000403495 OVOS2Q6IE36 1432 aa1.28□□□□□ -2.2
HMGB1P17-201ENST00000403495 PRRC2BQ5JSZ5 2229 aaKnown RBP1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 KDM5CP41229 1560 aa1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 COL1A1P02452 1464 aaPredicted RBP1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 RFX7Q2KHR2 1363 aa1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 IGKV3D-7A0A0C4DH55 119 aa1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 IGKV3OR2-268A0A0C4DH90 116 aa1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 LOC107984156A0A0G2JMH3 177 aa1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 TRBV6-4A0A1B0GX49 114 aa1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 ZNF727A8MUV8 499 aa1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 J3QR89 54 aa1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 HCRTO43612 131 aa1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 CCL4P13236 92 aa1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 CKS2P33552 79 aa1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 AKR1D1P51857 326 aa1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 PCBD1P61457 104 aa1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 MIR22HGQ0VDD5 57 aa1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 TMEM91Q6ZNR0 172 aa1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 FOXI2Q6ZQN5 318 aa1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 ARL17AQ8IVW1 177 aa1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 MMGT1Q8N4V1 131 aa1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 PAIP2BQ9ULR5 123 aaKnown RBP1.27□□□□□ -2.21
HMGB1P17-201ENST00000403495 H3BRM9 83 aa1.26□□□□□ -2.21
HMGB1P17-201ENST00000403495 NDUFA2O43678 99 aa1.26□□□□□ -2.21
HMGB1P17-201ENST00000403495 DNAL4O96015 105 aa1.26□□□□□ -2.21
HMGB1P17-201ENST00000403495 HLA-DRB4P13762 266 aa1.26□□□□□ -2.21
HMGB1P17-201ENST00000403495 KDELR1P24390 212 aa1.26□□□□□ -2.21
HMGB1P17-201ENST00000403495 MPV17LQ2QL34 196 aa1.26□□□□□ -2.21
HMGB1P17-201ENST00000403495 GLYATL3Q5SZD4 288 aa1.26□□□□□ -2.21
HMGB1P17-201ENST00000403495 UNQ6190/PRO20217Q6UXQ8 127 aa1.26□□□□□ -2.21
HMGB1P17-201ENST00000403495 ZCCHC23Q6ZST2 131 aa1.26□□□□□ -2.21
HMGB1P17-201ENST00000403495 FAM19A2Q8N3H0 131 aa1.26□□□□□ -2.21
HMGB1P17-201ENST00000403495 OTOSQ8NHW6 89 aa1.26□□□□□ -2.21
HMGB1P17-201ENST00000403495 CIB3Q96Q77 187 aaPredicted RBP1.26□□□□□ -2.21
HMGB1P17-201ENST00000403495 VPS25Q9BRG1 176 aa1.26□□□□□ -2.21
HMGB1P17-201ENST00000403495 CYSTM1Q9H1C7 97 aa1.26□□□□□ -2.21
HMGB1P17-201ENST00000403495 TPT1P8Q9HAU6 139 aa1.26□□□□□ -2.21
HMGB1P17-201ENST00000403495 COMMD3Q9UBI1 195 aa1.26□□□□□ -2.21
HMGB1P17-201ENST00000403495 METTL1Q9UBP6 276 aaKnown RBP1.26□□□□□ -2.21
HMGB1P17-201ENST00000403495 TNFSF18Q9UNG2 199 aa1.26□□□□□ -2.21
HMGB1P17-201ENST00000403495 HLA-DRB4X5D2U9 266 aa1.26□□□□□ -2.21
HMGB1P17-201ENST00000403495 ANKRD31Q8N7Z5 1873 aa1.26□□□□□ -2.21
HMGB1P17-201ENST00000403495 DISP2A7MBM2 1401 aa1.25□□□□□ -2.21
HMGB1P17-201ENST00000403495 PCDH15Q96QU1 1955 aa1.25□□□□□ -2.21
HMGB1P17-201ENST00000403495 MYH7BA7E2Y1 1941 aa1.25□□□□□ -2.21
HMGB1P17-201ENST00000403495 CCDC171Q6TFL3 1326 aa1.25□□□□□ -2.21
HMGB1P17-201ENST00000403495 PNMA8CA0A1B0GUJ8 204 aa1.25□□□□□ -2.21
HMGB1P17-201ENST00000403495 K7ERU9 68 aa1.25□□□□□ -2.21
HMGB1P17-201ENST00000403495 EDF1O60869 148 aaKnown RBP1.25□□□□□ -2.21
HMGB1P17-201ENST00000403495 CD14P08571 375 aa1.25□□□□□ -2.21
HMGB1P17-201ENST00000403495 IGLC6P0CF74 106 aa1.25□□□□□ -2.21
HMGB1P17-201ENST00000403495 NCS1P62166 190 aa1.25□□□□□ -2.21
HMGB1P17-201ENST00000403495 NEDD8Q15843 81 aa1.25□□□□□ -2.21
HMGB1P17-201ENST00000403495 CTAGE3PQ8IX95 158 aa1.25□□□□□ -2.21
HMGB1P17-201ENST00000403495 DEFB119Q8N690 84 aa1.25□□□□□ -2.21
HMGB1P17-201ENST00000403495 SLC35B3Q9H1N7 401 aa1.25□□□□□ -2.21
HMGB1P17-201ENST00000403495 MPC1Q9Y5U8 109 aa1.25□□□□□ -2.21
HMGB1P17-201ENST00000403495 LAMB4A4D0S4 1761 aa1.25□□□□□ -2.21
HMGB1P17-201ENST00000403495 DOCK4Q8N1I0 1966 aa1.25□□□□□ -2.21
HMGB1P17-201ENST00000403495 CECR2Q9BXF3 1484 aa1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 NUP210Q8TEM1 1887 aaPredicted RBP1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 ARHGAP31Q2M1Z3 1444 aa1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 FGD6Q6ZV73 1430 aa1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 MYOFQ9NZM1 2061 aa1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 IGKV2-40A0A087WW87 121 aaPredicted RBP1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 LOC110117498A0A087WWA1 95 aa1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 TRBV6-7A0A0A0MS04 114 aa1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 IGHV1-24A0A0C4DH33 117 aa1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 INE1O15225 51 aa1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 NUPR1O60356 82 aa1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 IGKV2D-40P01614 121 aaPredicted RBP1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 RBP4P02753 201 aa1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 CD3DP04234 171 aa1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 TSPAN19P0C672 248 aa1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 ASB16-AS1Q495Z4 193 aa1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 C10orf105Q8TEF2 133 aa1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 SMIM7Q9BQ49 75 aa1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 LPAR5Q9H1C0 372 aa1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 DNAJC15Q9Y5T4 150 aa1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 SYNJ1O43426 1573 aa1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 MGAMO43451 1857 aa1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 RP1P56715 2156 aa1.24□□□□□ -2.21
HMGB1P17-201ENST00000403495 PRG4Q92954 1404 aaPredicted RBP1.23□□□□□ -2.21
HMGB1P17-201ENST00000403495 COL24A1Q17RW2 1714 aa1.23□□□□□ -2.21
HMGB1P17-201ENST00000403495 MICAL3Q7RTP6 2002 aa1.23□□□□□ -2.21
HMGB1P17-201ENST00000403495 BRWD1Q9NSI6 2320 aa1.23□□□□□ -2.21
HMGB1P17-201ENST00000403495 BICRAQ9NZM4 1560 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms