RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 CCDC144NLQ6NUI1 221 aa12.41□□□□□ -0.42
CHRFAM7A-203ENST00000401522 SERTM2A0A1B0GWG4 89 aa12.4□□□□□ -0.42
CHRFAM7A-203ENST00000401522 TSPOP30536 169 aa12.4□□□□□ -0.42
CHRFAM7A-203ENST00000401522 HES1Q14469 280 aa12.4□□□□□ -0.42
CHRFAM7A-203ENST00000401522 MAJINQ3KP22 176 aa12.4□□□□□ -0.42
CHRFAM7A-203ENST00000401522 DYNAPQ8N1N2 210 aa12.4□□□□□ -0.42
CHRFAM7A-203ENST00000401522 M0QZ24 198 aa12.39□□□□□ -0.43
CHRFAM7A-203ENST00000401522 LEPROTL1O95214 131 aa12.39□□□□□ -0.43
CHRFAM7A-203ENST00000401522 CD24P25063 80 aa12.39□□□□□ -0.43
CHRFAM7A-203ENST00000401522 PRR31Q5SQ13 230 aa12.39□□□□□ -0.43
CHRFAM7A-203ENST00000401522 ZNF562Q6V9R5 426 aa12.39□□□□□ -0.43
CHRFAM7A-203ENST00000401522 ARPC1AQ92747 370 aa12.39□□□□□ -0.43
CHRFAM7A-203ENST00000401522 FANCD2OSQ96PS1 177 aa12.39□□□□□ -0.43
CHRFAM7A-203ENST00000401522 MEGF9Q9H1U4 602 aa12.39□□□□□ -0.43
CHRFAM7A-203ENST00000401522 AAMDCQ9H7C9 122 aa12.39□□□□□ -0.43
CHRFAM7A-203ENST00000401522 GOLT1BQ9Y3E0 138 aa12.39□□□□□ -0.43
CHRFAM7A-203ENST00000401522 SYS1-DBNDD2H3BUS1 97 aa12.39□□□□□ -0.43
CHRFAM7A-203ENST00000401522 Q71RC1 249 aaPredicted RBP12.39□□□□□ -0.43
CHRFAM7A-203ENST00000401522 TTC9CQ8N5M4 171 aa12.39□□□□□ -0.43
CHRFAM7A-203ENST00000401522 MAST4O15021 2626 aa12.38□□□□□ -0.43
CHRFAM7A-203ENST00000401522 CT45A10P0DMU9 189 aa12.38□□□□□ -0.43
CHRFAM7A-203ENST00000401522 IGLL1P15814 213 aa12.38□□□□□ -0.43
CHRFAM7A-203ENST00000401522 IL17RELQ6ZVW7 336 aa12.38□□□□□ -0.43
CHRFAM7A-203ENST00000401522 SPATA12Q7Z6I5 190 aa12.38□□□□□ -0.43
CHRFAM7A-203ENST00000401522 ARL6IP6Q8N6S5 226 aa12.38□□□□□ -0.43
CHRFAM7A-203ENST00000401522 SCGB2A1O75556 95 aa12.37□□□□□ -0.43
CHRFAM7A-203ENST00000401522 CSN1S1P47710 185 aa12.37□□□□□ -0.43
CHRFAM7A-203ENST00000401522 PSG9Q00887 426 aa12.37□□□□□ -0.43
CHRFAM7A-203ENST00000401522 BCL6BQ8N143 479 aaPredicted RBP12.37□□□□□ -0.43
CHRFAM7A-203ENST00000401522 ST20Q9HBF5 79 aa12.37□□□□□ -0.43
CHRFAM7A-203ENST00000401522 C21orf62Q9NYP8 219 aa12.37□□□□□ -0.43
CHRFAM7A-203ENST00000401522 THYN1Q9P016 225 aa12.37□□□□□ -0.43
CHRFAM7A-203ENST00000401522 HSPB8Q9UJY1 196 aa12.37□□□□□ -0.43
CHRFAM7A-203ENST00000401522 HIVEP2P31629 2446 aa12.37□□□□□ -0.43
CHRFAM7A-203ENST00000401522 OR4C46A6NHA9 309 aa12.37□□□□□ -0.43
CHRFAM7A-203ENST00000401522 ARMS2P0C7Q2 107 aa12.37□□□□□ -0.43
CHRFAM7A-203ENST00000401522 Q8N6K4 173 aa12.37□□□□□ -0.43
CHRFAM7A-203ENST00000401522 STPG4Q8N801 248 aa12.37□□□□□ -0.43
CHRFAM7A-203ENST00000401522 MXRA5Q9NR99 2828 aa12.36□□□□□ -0.43
CHRFAM7A-203ENST00000401522 SONP18583 2426 aaKnown RBP12.36□□□□□ -0.43
CHRFAM7A-203ENST00000401522 F8P00451 2351 aa12.36□□□□□ -0.43
CHRFAM7A-203ENST00000401522 CRIP1P50238 77 aa12.36□□□□□ -0.43
CHRFAM7A-203ENST00000401522 PET117Q6UWS5 81 aa12.36□□□□□ -0.43
CHRFAM7A-203ENST00000401522 MAP1LC3CQ9BXW4 147 aa12.36□□□□□ -0.43
CHRFAM7A-203ENST00000401522 TMEM191AQ9H0A3 160 aa12.36□□□□□ -0.43
CHRFAM7A-203ENST00000401522 FBLL1A6NHQ2 334 aaKnown RBP12.35□□□□□ -0.43
CHRFAM7A-203ENST00000401522 F8W735 103 aaPredicted RBP12.35□□□□□ -0.43
CHRFAM7A-203ENST00000401522 M0R3E3 92 aa12.35□□□□□ -0.43
CHRFAM7A-203ENST00000401522 RPL7P18124 248 aaKnown RBP12.35□□□□□ -0.43
CHRFAM7A-203ENST00000401522 TFPI2P48307 235 aa12.35□□□□□ -0.43
CHRFAM7A-203ENST00000401522 EBI3Q14213 229 aa12.35□□□□□ -0.43
CHRFAM7A-203ENST00000401522 S4R3C0 116 aa12.35□□□□□ -0.43
CHRFAM7A-203ENST00000401522 NDPQ00604 133 aa12.35□□□□□ -0.43
CHRFAM7A-203ENST00000401522 DEFB112Q30KQ8 113 aa12.35□□□□□ -0.43
CHRFAM7A-203ENST00000401522 FBLN7Q53RD9 439 aa12.35□□□□□ -0.43
CHRFAM7A-203ENST00000401522 LINC00173Q6ZV60 143 aa12.35□□□□□ -0.43
CHRFAM7A-203ENST00000401522 COX8CQ7Z4L0 72 aa12.35□□□□□ -0.43
CHRFAM7A-203ENST00000401522 NCBP2LA6PVI3 153 aaKnown RBP12.34□□□□□ -0.43
CHRFAM7A-203ENST00000401522 NPSP0C0P6 89 aa12.34□□□□□ -0.43
CHRFAM7A-203ENST00000401522 S100A7P31151 101 aa12.34□□□□□ -0.43
CHRFAM7A-203ENST00000401522 ZNF493Q6ZR52 646 aa12.34□□□□□ -0.43
CHRFAM7A-203ENST00000401522 INAFM1C9JVW0 142 aa12.33□□□□□ -0.44
CHRFAM7A-203ENST00000401522 SCGB2A2Q13296 93 aa12.33□□□□□ -0.44
CHRFAM7A-203ENST00000401522 SAPCD1Q5SSQ6 148 aa12.33□□□□□ -0.44
CHRFAM7A-203ENST00000401522 C8orf49Q96NF6 230 aa12.33□□□□□ -0.44
CHRFAM7A-203ENST00000401522 TMEM189A5PLL7 270 aa12.33□□□□□ -0.44
CHRFAM7A-203ENST00000401522 NDUFB8O95169 186 aa12.33□□□□□ -0.44
CHRFAM7A-203ENST00000401522 Q6YL49 198 aa12.33□□□□□ -0.44
CHRFAM7A-203ENST00000401522 PIFOQ8TCI5 191 aa12.33□□□□□ -0.44
CHRFAM7A-203ENST00000401522 ASCL2Q99929 193 aa12.33□□□□□ -0.44
CHRFAM7A-203ENST00000401522 AP5S1Q9NUS5 200 aa12.33□□□□□ -0.44
CHRFAM7A-203ENST00000401522 HSBP1L1C9JCN9 74 aa12.32□□□□□ -0.44
CHRFAM7A-203ENST00000401522 FAM106CPP0CH98 169 aa12.32□□□□□ -0.44
CHRFAM7A-203ENST00000401522 TMEM11P17152 192 aa12.32□□□□□ -0.44
CHRFAM7A-203ENST00000401522 SRD5A1P18405 259 aa12.32□□□□□ -0.44
CHRFAM7A-203ENST00000401522 ZNF138P52744 262 aa12.32□□□□□ -0.44
CHRFAM7A-203ENST00000401522 ORAOV1Q8WV07 137 aa12.32□□□□□ -0.44
CHRFAM7A-203ENST00000401522 RABAC1Q9UI14 185 aa12.32□□□□□ -0.44
CHRFAM7A-203ENST00000401522 SH2D1AO60880 128 aa12.31□□□□□ -0.44
CHRFAM7A-203ENST00000401522 HINT1P49773 126 aaPredicted RBP12.31□□□□□ -0.44
CHRFAM7A-203ENST00000401522 FA2HQ7L5A8 372 aa12.31□□□□□ -0.44
CHRFAM7A-203ENST00000401522 TPPP3Q9BW30 176 aa12.31□□□□□ -0.44
CHRFAM7A-203ENST00000401522 ZFHX3Q15911 3703 aa12.31□□□□□ -0.44
CHRFAM7A-203ENST00000401522 NSD1Q96L73 2696 aaPredicted RBP12.31□□□□□ -0.44
CHRFAM7A-203ENST00000401522 CSN3P07498 182 aa12.31□□□□□ -0.44
CHRFAM7A-203ENST00000401522 RPS20P60866 119 aaKnown RBP12.31□□□□□ -0.44
CHRFAM7A-203ENST00000401522 U3KQK5 164 aa12.31□□□□□ -0.44
CHRFAM7A-203ENST00000401522 OR2T8A6NH00 312 aa12.3□□□□□ -0.44
CHRFAM7A-203ENST00000401522 CTSGP08311 255 aa12.3□□□□□ -0.44
CHRFAM7A-203ENST00000401522 PRSS3P2Q8NHM4 247 aa12.3□□□□□ -0.44
CHRFAM7A-203ENST00000401522 MS4A6AQ9H2W1 248 aa12.3□□□□□ -0.44
CHRFAM7A-203ENST00000401522 IGHV7-81A0A0B4J1V7 117 aa12.29□□□□□ -0.44
CHRFAM7A-203ENST00000401522 CRLF1O75462 422 aa12.29□□□□□ -0.44
CHRFAM7A-203ENST00000401522 EGR2P11161 476 aaPredicted RBP12.29□□□□□ -0.44
CHRFAM7A-203ENST00000401522 RELQ04864 619 aaPredicted RBP12.29□□□□□ -0.44
CHRFAM7A-203ENST00000401522 LINC01545Q5VT33 79 aa12.29□□□□□ -0.44
CHRFAM7A-203ENST00000401522 LYZL1Q6UWQ5 148 aa12.29□□□□□ -0.44
CHRFAM7A-203ENST00000401522 OR10AG1Q8NH19 301 aa12.29□□□□□ -0.44
CHRFAM7A-203ENST00000401522 PRR25Q96S07 402 aa12.29□□□□□ -0.44
CHRFAM7A-203ENST00000401522 ANK3Q12955 4377 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms