RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 ERCC8Q13216 396 aa12.76□□□□□ -0.37
TRIM39-205ENST00000396551 LINC00173Q6ZV60 143 aa12.76□□□□□ -0.37
TRIM39-205ENST00000396551 IGHV3-49A0A0A0MS15 119 aa12.76□□□□□ -0.37
TRIM39-205ENST00000396551 A0A1B0GW15 77 aa12.76□□□□□ -0.37
TRIM39-205ENST00000396551 CRIP2P52943 208 aaPredicted RBP12.76□□□□□ -0.37
TRIM39-205ENST00000396551 IGSF10Q6WRI0 2623 aa12.76□□□□□ -0.37
TRIM39-205ENST00000396551 TMEM213A2RRL7 107 aa12.75□□□□□ -0.37
TRIM39-205ENST00000396551 FBLL1A6NHQ2 334 aaKnown RBP12.75□□□□□ -0.37
TRIM39-205ENST00000396551 RAB9AP51151 201 aa12.75□□□□□ -0.37
TRIM39-205ENST00000396551 ATP5G2Q06055 141 aa12.75□□□□□ -0.37
TRIM39-205ENST00000396551 PSMG3-AS1Q96PY0 264 aa12.75□□□□□ -0.37
TRIM39-205ENST00000396551 ATP5J2P56134 94 aa12.75□□□□□ -0.37
TRIM39-205ENST00000396551 ZNF493Q6ZR52 646 aa12.75□□□□□ -0.37
TRIM39-205ENST00000396551 NDUFS8O00217 210 aa12.75□□□□□ -0.37
TRIM39-205ENST00000396551 TMEM95Q3KNT9 176 aa12.75□□□□□ -0.37
TRIM39-205ENST00000396551 U3KQE9 123 aa12.74□□□□□ -0.37
TRIM39-205ENST00000396551 MUC21A0A0G2JKD1 596 aa12.73□□□□□ -0.37
TRIM39-205ENST00000396551 MUC21A0A140T8X8 626 aa12.73□□□□□ -0.37
TRIM39-205ENST00000396551 CSN3P07498 182 aa12.73□□□□□ -0.37
TRIM39-205ENST00000396551 LY6EQ16553 131 aa12.73□□□□□ -0.37
TRIM39-205ENST00000396551 MUC21Q5SSG8 566 aa12.73□□□□□ -0.37
TRIM39-205ENST00000396551 TRAV8-2A0A0B4J237 113 aa12.73□□□□□ -0.37
TRIM39-205ENST00000396551 FLNCQ14315 2725 aa12.73□□□□□ -0.37
TRIM39-205ENST00000396551 IGLC3P0DOY3 106 aa12.73□□□□□ -0.37
TRIM39-205ENST00000396551 METTL26Q96S19 204 aa12.73□□□□□ -0.37
TRIM39-205ENST00000396551 DOPEY1Q5JWR5 2465 aa12.72□□□□□ -0.37
TRIM39-205ENST00000396551 SLC50A1Q9BRV3 221 aa12.72□□□□□ -0.37
TRIM39-205ENST00000396551 TMEM70Q9BUB7 260 aa12.72□□□□□ -0.37
TRIM39-205ENST00000396551 TMEM8BA6NDV4 472 aa12.72□□□□□ -0.37
TRIM39-205ENST00000396551 FAM223BA6NKX1 122 aa12.72□□□□□ -0.37
TRIM39-205ENST00000396551 TRGV3P03979 118 aa12.72□□□□□ -0.37
TRIM39-205ENST00000396551 FAM223AQ8IWN6 122 aa12.72□□□□□ -0.37
TRIM39-205ENST00000396551 IGLC6P0CF74 106 aa12.71□□□□□ -0.37
TRIM39-205ENST00000396551 BMI1P35226 326 aa12.71□□□□□ -0.37
TRIM39-205ENST00000396551 USP9XQ93008 2570 aaPredicted RBP12.71□□□□□ -0.37
TRIM39-205ENST00000396551 LEPROTL1O95214 131 aa12.71□□□□□ -0.37
TRIM39-205ENST00000396551 RBAKDNA6NC62 111 aa12.71□□□□□ -0.38
TRIM39-205ENST00000396551 A6NDX4 124 aa12.71□□□□□ -0.38
TRIM39-205ENST00000396551 H3BUX3 64 aa12.71□□□□□ -0.38
TRIM39-205ENST00000396551 TRBV12-3P01733 135 aa12.71□□□□□ -0.38
TRIM39-205ENST00000396551 IL17RELQ6ZVW7 336 aa12.71□□□□□ -0.38
TRIM39-205ENST00000396551 AMN1Q8IY45 258 aa12.71□□□□□ -0.38
TRIM39-205ENST00000396551 WFDC12Q8WWY7 111 aa12.71□□□□□ -0.38
TRIM39-205ENST00000396551 CRXO43186 299 aaPredicted RBP12.7□□□□□ -0.38
TRIM39-205ENST00000396551 IGF1P05019 195 aa12.7□□□□□ -0.38
TRIM39-205ENST00000396551 MSMBP08118 114 aa12.7□□□□□ -0.38
TRIM39-205ENST00000396551 FAM104BQ5XKR9 115 aa12.7□□□□□ -0.38
TRIM39-205ENST00000396551 MRPL52Q86TS9 123 aaKnown RBP12.7□□□□□ -0.38
TRIM39-205ENST00000396551 FER1L6-AS1Q8NA97 138 aa12.7□□□□□ -0.38
TRIM39-205ENST00000396551 NRGNQ92686 78 aa12.7□□□□□ -0.38
TRIM39-205ENST00000396551 ATP6V0BQ99437 205 aa12.7□□□□□ -0.38
TRIM39-205ENST00000396551 RPS20P60866 119 aaKnown RBP12.7□□□□□ -0.38
TRIM39-205ENST00000396551 C8orf86Q6ZUL3 223 aa12.7□□□□□ -0.38
TRIM39-205ENST00000396551 TMEM238C9JI98 176 aa12.69□□□□□ -0.38
TRIM39-205ENST00000396551 SYS1-DBNDD2H3BUS1 97 aa12.69□□□□□ -0.38
TRIM39-205ENST00000396551 AVPP01185 164 aa12.69□□□□□ -0.38
TRIM39-205ENST00000396551 PPIFP30405 207 aaKnown RBP12.69□□□□□ -0.38
TRIM39-205ENST00000396551 SRSF2Q01130 221 aaKnown RBP12.69□□□□□ -0.38
TRIM39-205ENST00000396551 Q6ZS46 218 aa12.69□□□□□ -0.38
TRIM39-205ENST00000396551 AGPAT4-IT1Q9H0P7 198 aa12.69□□□□□ -0.38
TRIM39-205ENST00000396551 U3KQK5 164 aa12.69□□□□□ -0.38
TRIM39-205ENST00000396551 SPG11Q96JI7 2443 aa12.69□□□□□ -0.38
TRIM39-205ENST00000396551 D6R8Y8 96 aa12.69□□□□□ -0.38
TRIM39-205ENST00000396551 UQCR10Q9UDW1 63 aa12.69□□□□□ -0.38
TRIM39-205ENST00000396551 CELSR2Q9HCU4 2923 aa12.69□□□□□ -0.38
TRIM39-205ENST00000396551 TRAV9-2A0A087WT02 112 aa12.69□□□□□ -0.38
TRIM39-205ENST00000396551 FABP5P3A8MUU1 101 aa12.69□□□□□ -0.38
TRIM39-205ENST00000396551 IGHG2P01859 326 aa12.69□□□□□ -0.38
TRIM39-205ENST00000396551 ARL3P36405 182 aa12.69□□□□□ -0.38
TRIM39-205ENST00000396551 BATFQ16520 125 aa12.69□□□□□ -0.38
TRIM39-205ENST00000396551 ORM1P02763 201 aa12.68□□□□□ -0.38
TRIM39-205ENST00000396551 IGLL1P15814 213 aa12.68□□□□□ -0.38
TRIM39-205ENST00000396551 MRPL51Q4U2R6 128 aaKnown RBP12.68□□□□□ -0.38
TRIM39-205ENST00000396551 UNQ9165/PRO28630Q6UXU0 137 aa12.68□□□□□ -0.38
TRIM39-205ENST00000396551 GLMPQ8WWB7 406 aa12.68□□□□□ -0.38
TRIM39-205ENST00000396551 OR5AL1P0C617 328 aa12.67□□□□□ -0.38
TRIM39-205ENST00000396551 BLCAPP62952 87 aa12.67□□□□□ -0.38
TRIM39-205ENST00000396551 FAM106AQ4KMX7 169 aa12.67□□□□□ -0.38
TRIM39-205ENST00000396551 VPS25Q9BRG1 176 aa12.67□□□□□ -0.38
TRIM39-205ENST00000396551 UTP20O75691 2785 aaKnown RBP12.67□□□□□ -0.38
TRIM39-205ENST00000396551 M0QZK8 103 aa12.67□□□□□ -0.38
TRIM39-205ENST00000396551 TWIST1Q15672 202 aa12.67□□□□□ -0.38
TRIM39-205ENST00000396551 LINC01559Q495D7 138 aa12.67□□□□□ -0.38
TRIM39-205ENST00000396551 KLHDC1Q8N7A1 406 aa12.67□□□□□ -0.38
TRIM39-205ENST00000396551 KLK15Q9H2R5 256 aa12.67□□□□□ -0.38
TRIM39-205ENST00000396551 AP5S1Q9NUS5 200 aa12.67□□□□□ -0.38
TRIM39-205ENST00000396551 HIF1ANQ9NWT6 349 aa12.67□□□□□ -0.38
TRIM39-205ENST00000396551 MSRB1Q9NZV6 116 aa12.67□□□□□ -0.38
TRIM39-205ENST00000396551 C11orf21Q9P2W6 132 aa12.67□□□□□ -0.38
TRIM39-205ENST00000396551 OR4C46A6NHA9 309 aa12.66□□□□□ -0.38
TRIM39-205ENST00000396551 SMAD7O15105 426 aaKnown RBP12.66□□□□□ -0.38
TRIM39-205ENST00000396551 IFI27P40305 119 aaPredicted RBP12.66□□□□□ -0.38
TRIM39-205ENST00000396551 MRPL53Q96EL3 112 aaKnown RBP12.66□□□□□ -0.38
TRIM39-205ENST00000396551 PRELID3AQ96N28 172 aa12.66□□□□□ -0.38
TRIM39-205ENST00000396551 LOXL1Q08397 574 aaPredicted RBP12.66□□□□□ -0.38
TRIM39-205ENST00000396551 PRSS3P2Q8NHM4 247 aa12.66□□□□□ -0.38
TRIM39-205ENST00000396551 Q6ZN92 141 aa12.66□□□□□ -0.38
TRIM39-205ENST00000396551 SIGLEC8Q9NYZ4 499 aa12.66□□□□□ -0.38
TRIM39-205ENST00000396551 CRYBG3Q68DQ2 2970 aa12.65□□□□□ -0.38
TRIM39-205ENST00000396551 SMKR1H3BMG3 65 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms