RNA–Protein interactions for RNA: ENST00000395812.6

CAST-206, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-206ENST00000395812 RNASE1P07998 156 aaKnown RBP10.09□□□□□ -0.79
CAST-206ENST00000395812 CCL18P55774 89 aa10.09□□□□□ -0.79
CAST-206ENST00000395812 COL5A1P20908 1838 aaPredicted RBP10.09□□□□□ -0.79
CAST-206ENST00000395812 Q6ZSV7 163 aa10.08□□□□□ -0.8
CAST-206ENST00000395812 CBLN2Q8IUK8 224 aa10.08□□□□□ -0.8
CAST-206ENST00000395812 RNASE7Q9H1E1 156 aaKnown RBP10.08□□□□□ -0.8
CAST-206ENST00000395812 KLK9Q9UKQ9 250 aa10.08□□□□□ -0.8
CAST-206ENST00000395812 ERCC8Q13216 396 aa10.08□□□□□ -0.8
CAST-206ENST00000395812 LINC01549A6NIU2 74 aa10.08□□□□□ -0.8
CAST-206ENST00000395812 PAX4O43316 350 aa10.08□□□□□ -0.8
CAST-206ENST00000395812 A8MWV9 139 aa10.08□□□□□ -0.8
CAST-206ENST00000395812 SRP19P09132 144 aaKnown RBP10.08□□□□□ -0.8
CAST-206ENST00000395812 SPXQ9BT56 116 aa10.08□□□□□ -0.8
CAST-206ENST00000395812 LINC00862A6NCI5 91 aa10.07□□□□□ -0.8
CAST-206ENST00000395812 C2orf70A6NJV1 201 aa10.07□□□□□ -0.8
CAST-206ENST00000395812 TRAV12-2A0A075B6T6 113 aa10.07□□□□□ -0.8
CAST-206ENST00000395812 IFITM10A6NMD0 228 aa10.07□□□□□ -0.8
CAST-206ENST00000395812 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.07□□□□□ -0.8
CAST-206ENST00000395812 CGB3P0DN86 165 aa10.07□□□□□ -0.8
CAST-206ENST00000395812 ZNF493Q6ZR52 646 aa10.07□□□□□ -0.8
CAST-206ENST00000395812 C18orf15Q96N68 181 aa10.07□□□□□ -0.8
CAST-206ENST00000395812 MS4A6AQ9H2W1 248 aa10.07□□□□□ -0.8
CAST-206ENST00000395812 ANAPC10Q9UM13 185 aa10.07□□□□□ -0.8
CAST-206ENST00000395812 IZUMO1RA6ND01 250 aa10.07□□□□□ -0.8
CAST-206ENST00000395812 ORMDL2Q53FV1 153 aa10.07□□□□□ -0.8
CAST-206ENST00000395812 GPHB5Q86YW7 130 aa10.07□□□□□ -0.8
CAST-206ENST00000395812 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.07□□□□□ -0.8
CAST-206ENST00000395812 SMR3AQ99954 134 aa10.07□□□□□ -0.8
CAST-206ENST00000395812 VSIRQ9H7M9 311 aa10.07□□□□□ -0.8
CAST-206ENST00000395812 MUC22E2RYF6 1773 aaPredicted RBP10.07□□□□□ -0.8
CAST-206ENST00000395812 TRBV19A0A075B6N1 114 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 ARMS2P0C7Q2 107 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 EVI2AP22794 236 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 ZNF491Q8N8L2 437 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 GAGE12JA6NER3 117 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 C5orf52A6NGY3 159 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 APOMO95445 188 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 IGKV1-39P01597 117 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 IGKV1D-39P04432 117 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 GAGE1Q13065 139 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 GAGE4Q13068 117 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 GAGE5Q13069 117 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 GAGE13Q4V321 117 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 ZNF295-AS1Q8N0V1 137 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 NXT2Q9NPJ8 142 aaKnown RBP10.06□□□□□ -0.8
CAST-206ENST00000395812 COX6CP09669 75 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 HAPLN4Q86UW8 402 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 OR11H2Q8NH07 326 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 C1orf159Q96HA4 380 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 WFDC1Q9HC57 220 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 SH2D1AO60880 128 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 APOHP02749 345 aaPredicted RBP10.06□□□□□ -0.8
CAST-206ENST00000395812 CKS1BP61024 79 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 SRSF1Q07955 248 aaKnown RBP eCLIP10.06□□□□□ -0.8
CAST-206ENST00000395812 CD300EQ496F6 205 aaPredicted RBP10.06□□□□□ -0.8
CAST-206ENST00000395812 APRG1Q8IVJ8 170 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 C14orf178Q8N769 122 aaPredicted RBP10.06□□□□□ -0.8
CAST-206ENST00000395812 PYGO2Q9BRQ0 406 aa10.06□□□□□ -0.8
CAST-206ENST00000395812 IGLV11-55A0A075B6I3 123 aa10.05□□□□□ -0.8
CAST-206ENST00000395812 IGKV3D-20A0A0C4DH25 116 aa10.05□□□□□ -0.8
CAST-206ENST00000395812 H3BRN7 92 aa10.05□□□□□ -0.8
CAST-206ENST00000395812 NCKAP5O14513 1909 aa10.05□□□□□ -0.8
CAST-206ENST00000395812 K7EMT4 169 aa10.05□□□□□ -0.8
CAST-206ENST00000395812 HOXA5P20719 270 aa10.05□□□□□ -0.8
CAST-206ENST00000395812 EML6Q6ZMW3 1958 aa10.05□□□□□ -0.8
CAST-206ENST00000395812 NDUFA3O95167 84 aa10.05□□□□□ -0.8
CAST-206ENST00000395812 ATP5G1P05496 136 aa10.05□□□□□ -0.8
CAST-206ENST00000395812 OCC1Q8TAD7 63 aa10.05□□□□□ -0.8
CAST-206ENST00000395812 TSKUQ8WUA8 353 aa10.05□□□□□ -0.8
CAST-206ENST00000395812 RAB37Q96AX2 223 aa10.05□□□□□ -0.8
CAST-206ENST00000395812 IGF2BP2-AS1Q96M15 143 aa10.05□□□□□ -0.8
CAST-206ENST00000395812 PSMG3-AS1Q96PY0 264 aa10.05□□□□□ -0.8
CAST-206ENST00000395812 SEC11AP67812 179 aa10.05□□□□□ -0.8
CAST-206ENST00000395812 SSBP2P81877 361 aaPredicted RBP10.05□□□□□ -0.8
CAST-206ENST00000395812 IGHG4P01861 327 aa10.04□□□□□ -0.8
CAST-206ENST00000395812 PRR25Q96S07 402 aa10.04□□□□□ -0.8
CAST-206ENST00000395812 TRAV9-1A0A075B6T8 112 aa10.04□□□□□ -0.8
CAST-206ENST00000395812 A0A087WWL8 130 aa10.04□□□□□ -0.8
CAST-206ENST00000395812 TMEM238LA0A1B0GVL6 79 aa10.04□□□□□ -0.8
CAST-206ENST00000395812 A6NJY4 79 aa10.04□□□□□ -0.8
CAST-206ENST00000395812 VWC2Q2TAL6 325 aa10.04□□□□□ -0.8
CAST-206ENST00000395812 PHLDA1Q8WV24 401 aaPredicted RBP10.04□□□□□ -0.8
CAST-206ENST00000395812 VCYO14598 125 aa10.04□□□□□ -0.8
CAST-206ENST00000395812 SRSF2Q01130 221 aaKnown RBP10.04□□□□□ -0.8
CAST-206ENST00000395812 SS18Q15532 418 aa10.04□□□□□ -0.8
CAST-206ENST00000395812 DEFB135Q30KP9 77 aa10.04□□□□□ -0.8
CAST-206ENST00000395812 M0R143 59 aa10.03□□□□□ -0.8
CAST-206ENST00000395812 PRR31Q5SQ13 230 aa10.03□□□□□ -0.8
CAST-206ENST00000395812 ZNF414Q96IQ9 312 aa10.03□□□□□ -0.8
CAST-206ENST00000395812 NACAE9PAV3 2078 aa10.03□□□□□ -0.8
CAST-206ENST00000395812 ODF3BA8MYP8 253 aa10.03□□□□□ -0.8
CAST-206ENST00000395812 CGB7P0DN87 165 aa10.03□□□□□ -0.8
CAST-206ENST00000395812 NUDT10Q8NFP7 164 aa10.03□□□□□ -0.8
CAST-206ENST00000395812 LINC01006Q8NI28 216 aa10.03□□□□□ -0.8
CAST-206ENST00000395812 NUDT11Q96G61 164 aa10.03□□□□□ -0.8
CAST-206ENST00000395812 TMEM160Q9NX00 188 aa10.03□□□□□ -0.8
CAST-206ENST00000395812 PFN1P07737 140 aaKnown RBP10.03□□□□□ -0.8
CAST-206ENST00000395812 TCTAP57738 103 aa10.03□□□□□ -0.8
CAST-206ENST00000395812 RPL23P62829 140 aaKnown RBP10.03□□□□□ -0.8
CAST-206ENST00000395812 IGHV3-16A0A0C4DH30 117 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms