RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 WNK2Q9Y3S1 2297 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 AKAP6Q13023 2319 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 UTP20O75691 2785 aaKnown RBP11.03□□□□□ -0.64
CLCNKA-202ENST00000375692 H3BRM9 83 aa11.03□□□□□ -0.64
CLCNKA-202ENST00000375692 GAS8-AS1O95177 125 aa11.03□□□□□ -0.64
CLCNKA-202ENST00000375692 HBDP02042 147 aa11.03□□□□□ -0.64
CLCNKA-202ENST00000375692 ZNF80P51504 273 aaPredicted RBP11.03□□□□□ -0.64
CLCNKA-202ENST00000375692 RIPPLY3P57055 190 aa11.03□□□□□ -0.64
CLCNKA-202ENST00000375692 PAX8Q06710 450 aa11.03□□□□□ -0.64
CLCNKA-202ENST00000375692 TM4SF20Q53R12 229 aa11.03□□□□□ -0.64
CLCNKA-202ENST00000375692 SMIM15Q7Z3B0 74 aa11.03□□□□□ -0.64
CLCNKA-202ENST00000375692 IFI27L1Q96BM0 104 aa11.03□□□□□ -0.64
CLCNKA-202ENST00000375692 MSRB1Q9NZV6 116 aa11.03□□□□□ -0.64
CLCNKA-202ENST00000375692 WI2-2373I1.2A0A1W2PRP0 233 aa11.03□□□□□ -0.64
CLCNKA-202ENST00000375692 NPIPB5A8MRT5 1133 aa11.03□□□□□ -0.64
CLCNKA-202ENST00000375692 VSTM5A8MXK1 200 aa11.03□□□□□ -0.64
CLCNKA-202ENST00000375692 GNG7O60262 68 aa11.03□□□□□ -0.64
CLCNKA-202ENST00000375692 FER1L6-AS1Q8NA97 138 aa11.03□□□□□ -0.64
CLCNKA-202ENST00000375692 OR1N2Q8NGR9 330 aa11.03□□□□□ -0.64
CLCNKA-202ENST00000375692 A6NDN8 102 aa11.02□□□□□ -0.65
CLCNKA-202ENST00000375692 NDUFS7O75251 213 aa11.02□□□□□ -0.65
CLCNKA-202ENST00000375692 ADAMTSL5Q6ZMM2 481 aa11.02□□□□□ -0.65
CLCNKA-202ENST00000375692 DPF1Q92782 380 aa11.02□□□□□ -0.65
CLCNKA-202ENST00000375692 CSTL1Q9H114 145 aa11.02□□□□□ -0.65
CLCNKA-202ENST00000375692 ONECUT1Q9UBC0 465 aa11.02□□□□□ -0.65
CLCNKA-202ENST00000375692 A0A0G2JLM5 398 aa11.02□□□□□ -0.65
CLCNKA-202ENST00000375692 LY6LH3BQJ8 138 aa11.02□□□□□ -0.65
CLCNKA-202ENST00000375692 HLA-DMBP28068 263 aa11.02□□□□□ -0.65
CLCNKA-202ENST00000375692 IGHV3OR16-8A0A075B7F1 116 aa11.01□□□□□ -0.65
CLCNKA-202ENST00000375692 ITLN2Q8WWU7 325 aaPredicted RBP11.01□□□□□ -0.65
CLCNKA-202ENST00000375692 VGLL1Q99990 258 aa11.01□□□□□ -0.65
CLCNKA-202ENST00000375692 TTTY13Q9BZ97 58 aa11.01□□□□□ -0.65
CLCNKA-202ENST00000375692 HSD52Q0P140 79 aa11.01□□□□□ -0.65
CLCNKA-202ENST00000375692 GTF2H5Q6ZYL4 71 aa11.01□□□□□ -0.65
CLCNKA-202ENST00000375692 ZNF575Q86XF7 245 aa11.01□□□□□ -0.65
CLCNKA-202ENST00000375692 PRR25Q96S07 402 aa11.01□□□□□ -0.65
CLCNKA-202ENST00000375692 CHD6Q8TD26 2715 aa11□□□□□ -0.65
CLCNKA-202ENST00000375692 C19orf84I3L1E1 186 aa11□□□□□ -0.65
CLCNKA-202ENST00000375692 FANCD2OSQ96PS1 177 aa11□□□□□ -0.65
CLCNKA-202ENST00000375692 IGHV3-35A0A0C4DH35 117 aa10.99□□□□□ -0.65
CLCNKA-202ENST00000375692 F8W735 103 aaPredicted RBP10.99□□□□□ -0.65
CLCNKA-202ENST00000375692 K7EP34 96 aa10.99□□□□□ -0.65
CLCNKA-202ENST00000375692 NBR2O15453 112 aa10.99□□□□□ -0.65
CLCNKA-202ENST00000375692 CD3EP07766 207 aa10.99□□□□□ -0.65
CLCNKA-202ENST00000375692 OR9G4Q8NGQ1 327 aa10.99□□□□□ -0.65
CLCNKA-202ENST00000375692 OR2K2Q8NGT1 345 aa10.99□□□□□ -0.65
CLCNKA-202ENST00000375692 ASH1LQ9NR48 2969 aaKnown RBP10.99□□□□□ -0.65
CLCNKA-202ENST00000375692 PPIFP30405 207 aaKnown RBP10.99□□□□□ -0.65
CLCNKA-202ENST00000375692 HES1Q14469 280 aa10.99□□□□□ -0.65
CLCNKA-202ENST00000375692 IGKV2D-26A0A0A0MRZ7 120 aa10.98□□□□□ -0.65
CLCNKA-202ENST00000375692 LY6HO94772 140 aa10.98□□□□□ -0.65
CLCNKA-202ENST00000375692 EVI2AP22794 236 aa10.98□□□□□ -0.65
CLCNKA-202ENST00000375692 KLRD1Q13241 179 aa10.98□□□□□ -0.65
CLCNKA-202ENST00000375692 PDE6HQ13956 83 aa10.98□□□□□ -0.65
CLCNKA-202ENST00000375692 CRYBG3Q68DQ2 2970 aa10.98□□□□□ -0.65
CLCNKA-202ENST00000375692 ORM1P02763 201 aa10.98□□□□□ -0.65
CLCNKA-202ENST00000375692 MFAP4P55083 255 aa10.98□□□□□ -0.65
CLCNKA-202ENST00000375692 RNF5Q99942 180 aa10.98□□□□□ -0.65
CLCNKA-202ENST00000375692 SRSF8Q9BRL6 282 aaKnown RBP10.98□□□□□ -0.65
CLCNKA-202ENST00000375692 SMAD5-AS1Q9Y6J3 95 aa10.98□□□□□ -0.65
CLCNKA-202ENST00000375692 MED13LQ71F56 2210 aa10.97□□□□□ -0.65
CLCNKA-202ENST00000375692 IGHG4P01861 327 aa10.97□□□□□ -0.65
CLCNKA-202ENST00000375692 GATA1P15976 413 aaPredicted RBP10.97□□□□□ -0.65
CLCNKA-202ENST00000375692 OR4X2Q8NGF9 303 aa10.97□□□□□ -0.65
CLCNKA-202ENST00000375692 RNF185Q96GF1 192 aa10.97□□□□□ -0.65
CLCNKA-202ENST00000375692 LEPP41159 167 aa10.97□□□□□ -0.65
CLCNKA-202ENST00000375692 RAB1BQ9H0U4 201 aa10.97□□□□□ -0.65
CLCNKA-202ENST00000375692 IGLV11-55A0A075B6I3 123 aa10.96□□□□□ -0.65
CLCNKA-202ENST00000375692 A0A1W2PPM0 123 aa10.96□□□□□ -0.65
CLCNKA-202ENST00000375692 A0A1W2PPR1 153 aa10.96□□□□□ -0.65
CLCNKA-202ENST00000375692 SIVA1O15304 175 aa10.96□□□□□ -0.65
CLCNKA-202ENST00000375692 IGLC6P0CF74 106 aa10.96□□□□□ -0.65
CLCNKA-202ENST00000375692 NDPQ00604 133 aa10.96□□□□□ -0.65
CLCNKA-202ENST00000375692 ERCC8Q13216 396 aa10.96□□□□□ -0.65
CLCNKA-202ENST00000375692 CFHR4Q92496 578 aa10.96□□□□□ -0.65
CLCNKA-202ENST00000375692 SPCS1Q9Y6A9 102 aa10.96□□□□□ -0.65
CLCNKA-202ENST00000375692 G3V4G9 280 aa10.96□□□□□ -0.66
CLCNKA-202ENST00000375692 GCSHP23434 173 aa10.96□□□□□ -0.66
CLCNKA-202ENST00000375692 ZNF843Q8N446 348 aa10.96□□□□□ -0.66
CLCNKA-202ENST00000375692 C21orf62Q9NYP8 219 aa10.96□□□□□ -0.66
CLCNKA-202ENST00000375692 DPM3Q9P2X0 92 aa10.96□□□□□ -0.66
CLCNKA-202ENST00000375692 FAM208BQ5VWN6 2430 aa10.96□□□□□ -0.66
CLCNKA-202ENST00000375692 LRRK2Q5S007 2527 aa10.96□□□□□ -0.66
CLCNKA-202ENST00000375692 DOPEY1Q5JWR5 2465 aa10.96□□□□□ -0.66
CLCNKA-202ENST00000375692 B9A039 149 aa10.95□□□□□ -0.66
CLCNKA-202ENST00000375692 K7EMI3 77 aa10.95□□□□□ -0.66
CLCNKA-202ENST00000375692 NCBP2LA6PVI3 153 aaKnown RBP10.95□□□□□ -0.66
CLCNKA-202ENST00000375692 PRAC2D3DTV9 90 aa10.95□□□□□ -0.66
CLCNKA-202ENST00000375692 PRSS1P07477 247 aa10.95□□□□□ -0.66
CLCNKA-202ENST00000375692 FXYD2P54710 66 aa10.95□□□□□ -0.66
CLCNKA-202ENST00000375692 C5orf64Q2M2E5 130 aa10.95□□□□□ -0.66
CLCNKA-202ENST00000375692 TMEM190Q8WZ59 177 aa10.95□□□□□ -0.66
CLCNKA-202ENST00000375692 MAP1LC3AQ9H492 121 aa10.95□□□□□ -0.66
CLCNKA-202ENST00000375692 HHLA3Q9XRX5 114 aa10.95□□□□□ -0.66
CLCNKA-202ENST00000375692 K7ERJ3 54 aa10.94□□□□□ -0.66
CLCNKA-202ENST00000375692 RPL7P18124 248 aaKnown RBP10.94□□□□□ -0.66
CLCNKA-202ENST00000375692 ODF1Q14990 250 aa10.94□□□□□ -0.66
CLCNKA-202ENST00000375692 COX8CQ7Z4L0 72 aa10.94□□□□□ -0.66
CLCNKA-202ENST00000375692 TNFRSF6BO95407 300 aa10.94□□□□□ -0.66
CLCNKA-202ENST00000375692 BMI1P35226 326 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms