RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 TMEM190Q8WZ59 177 aa10.14□□□□□ -0.79
PRPF4-201ENST00000374198 PRORYQ9H606 182 aa10.14□□□□□ -0.79
PRPF4-201ENST00000374198 TRBV19A0A075B6N1 114 aa10.14□□□□□ -0.79
PRPF4-201ENST00000374198 A0A1W2PPI3 338 aa10.14□□□□□ -0.79
PRPF4-201ENST00000374198 TMEM262E9PQX1 116 aa10.14□□□□□ -0.79
PRPF4-201ENST00000374198 RHODO00212 210 aa10.14□□□□□ -0.79
PRPF4-201ENST00000374198 LYZP61626 148 aa10.14□□□□□ -0.79
PRPF4-201ENST00000374198 DIAPH2-AS1Q14236 149 aa10.14□□□□□ -0.79
PRPF4-201ENST00000374198 HCP5Q6MZN7 132 aa10.14□□□□□ -0.79
PRPF4-201ENST00000374198 ZFP2Q6ZN57 461 aa10.14□□□□□ -0.79
PRPF4-201ENST00000374198 C17orf77Q96MU5 243 aa10.14□□□□□ -0.79
PRPF4-201ENST00000374198 SPRY4Q9C004 299 aa10.14□□□□□ -0.79
PRPF4-201ENST00000374198 RPUSD1Q9UJJ7 312 aaKnown RBP10.14□□□□□ -0.79
PRPF4-201ENST00000374198 DSPP15924 2871 aaKnown RBP10.14□□□□□ -0.79
PRPF4-201ENST00000374198 IGHV3-21A0A0B4J1V1 117 aa10.14□□□□□ -0.79
PRPF4-201ENST00000374198 LOC107984156A0A0G2JMH3 177 aa10.14□□□□□ -0.79
PRPF4-201ENST00000374198 GAS8-AS1O95177 125 aa10.14□□□□□ -0.79
PRPF4-201ENST00000374198 BRI3O95415 125 aa10.14□□□□□ -0.79
PRPF4-201ENST00000374198 ARL17AQ8IVW1 177 aa10.14□□□□□ -0.79
PRPF4-201ENST00000374198 RNF185Q96GF1 192 aa10.14□□□□□ -0.79
PRPF4-201ENST00000374198 RAX2Q96IS3 184 aa10.14□□□□□ -0.79
PRPF4-201ENST00000374198 ZZEF1O43149 2961 aa10.14□□□□□ -0.79
PRPF4-201ENST00000374198 NBEAQ8NFP9 2946 aa10.13□□□□□ -0.79
PRPF4-201ENST00000374198 K7ENP7 123 aa10.13□□□□□ -0.79
PRPF4-201ENST00000374198 SH2D1AO60880 128 aa10.13□□□□□ -0.79
PRPF4-201ENST00000374198 NDUFV3P56181 108 aaKnown RBP10.13□□□□□ -0.79
PRPF4-201ENST00000374198 ANXA2RQ3ZCQ2 193 aa10.13□□□□□ -0.79
PRPF4-201ENST00000374198 DUX4L9Q6RFH8 374 aaPredicted RBP10.13□□□□□ -0.79
PRPF4-201ENST00000374198 NAV3Q8IVL0 2385 aa10.13□□□□□ -0.79
PRPF4-201ENST00000374198 LINC01549A6NIU2 74 aa10.13□□□□□ -0.79
PRPF4-201ENST00000374198 CCDC179H3BU77 68 aa10.13□□□□□ -0.79
PRPF4-201ENST00000374198 SIGLEC15Q6ZMC9 328 aa10.13□□□□□ -0.79
PRPF4-201ENST00000374198 C1orf122Q6ZSJ8 110 aa10.13□□□□□ -0.79
PRPF4-201ENST00000374198 LINC00574Q9H8X3 128 aa10.13□□□□□ -0.79
PRPF4-201ENST00000374198 DNAJC13O75165 2243 aa10.12□□□□□ -0.79
PRPF4-201ENST00000374198 MYMXA0A1B0GTQ4 84 aa10.12□□□□□ -0.79
PRPF4-201ENST00000374198 TNFRSF6BO95407 300 aa10.12□□□□□ -0.79
PRPF4-201ENST00000374198 IGKV3-15P01624 115 aa10.12□□□□□ -0.79
PRPF4-201ENST00000374198 SPRNQ5BIV9 151 aa10.12□□□□□ -0.79
PRPF4-201ENST00000374198 MBNL2Q5VZF2 373 aaKnown RBP10.12□□□□□ -0.79
PRPF4-201ENST00000374198 PVRIGQ6DKI7 326 aa10.12□□□□□ -0.79
PRPF4-201ENST00000374198 TNFRSF18Q9Y5U5 241 aa10.12□□□□□ -0.79
PRPF4-201ENST00000374198 FABP5P3A8MUU1 101 aa10.12□□□□□ -0.79
PRPF4-201ENST00000374198 WT1P19544 449 aaPredicted RBP10.12□□□□□ -0.79
PRPF4-201ENST00000374198 UBE2D3P61077 147 aa10.12□□□□□ -0.79
PRPF4-201ENST00000374198 UBE2D2P62837 147 aa10.12□□□□□ -0.79
PRPF4-201ENST00000374198 FAM201AQ5SY85 155 aa10.12□□□□□ -0.79
PRPF4-201ENST00000374198 SFTA2Q6UW10 78 aa10.12□□□□□ -0.79
PRPF4-201ENST00000374198 OR4C13Q8NGP0 309 aa10.12□□□□□ -0.79
PRPF4-201ENST00000374198 KIR2DL4Q99706 377 aa10.12□□□□□ -0.79
PRPF4-201ENST00000374198 NGBQ9NPG2 151 aa10.12□□□□□ -0.79
PRPF4-201ENST00000374198 A0A087WX48 190 aa10.11□□□□□ -0.79
PRPF4-201ENST00000374198 SBSPONQ8IVN8 264 aa10.11□□□□□ -0.79
PRPF4-201ENST00000374198 NDUFA3O95167 84 aa10.11□□□□□ -0.79
PRPF4-201ENST00000374198 LHBP01229 141 aa10.11□□□□□ -0.79
PRPF4-201ENST00000374198 PLNP26678 52 aa10.11□□□□□ -0.79
PRPF4-201ENST00000374198 GAGE2BQ13066 116 aa10.11□□□□□ -0.79
PRPF4-201ENST00000374198 TMEM30BQ3MIR4 351 aa10.11□□□□□ -0.79
PRPF4-201ENST00000374198 GAGE2EQ4V326 116 aa10.11□□□□□ -0.79
PRPF4-201ENST00000374198 LYPD1Q8N2G4 141 aa10.11□□□□□ -0.79
PRPF4-201ENST00000374198 FBXL15Q9H469 300 aa10.11□□□□□ -0.79
PRPF4-201ENST00000374198 GAGE2DQ9UEU5 116 aa10.11□□□□□ -0.79
PRPF4-201ENST00000374198 A8MWV9 139 aa10.1□□□□□ -0.79
PRPF4-201ENST00000374198 IGLV2-23P01705 113 aa10.1□□□□□ -0.79
PRPF4-201ENST00000374198 CECR9P0C854 216 aa10.1□□□□□ -0.79
PRPF4-201ENST00000374198 MYOZ3Q8TDC0 251 aa10.1□□□□□ -0.79
PRPF4-201ENST00000374198 ZFYVE26Q68DK2 2539 aa10.1□□□□□ -0.79
PRPF4-201ENST00000374198 TRBV20-1A0A075B6N2 111 aa10.1□□□□□ -0.79
PRPF4-201ENST00000374198 K7EM74 188 aa10.1□□□□□ -0.79
PRPF4-201ENST00000374198 M0R3E3 92 aa10.1□□□□□ -0.79
PRPF4-201ENST00000374198 CLEC3BP05452 202 aa10.1□□□□□ -0.79
PRPF4-201ENST00000374198 LYRM7Q5U5X0 104 aa10.1□□□□□ -0.79
PRPF4-201ENST00000374198 MSRB1Q9NZV6 116 aa10.1□□□□□ -0.79
PRPF4-201ENST00000374198 FAM208BQ5VWN6 2430 aa10.1□□□□□ -0.79
PRPF4-201ENST00000374198 LAMA5O15230 3695 aa10.1□□□□□ -0.79
PRPF4-201ENST00000374198 UBE2D1P51668 147 aa10.09□□□□□ -0.79
PRPF4-201ENST00000374198 Q8N8P6 123 aa10.09□□□□□ -0.79
PRPF4-201ENST00000374198 AJUBAQ96IF1 538 aa10.09□□□□□ -0.79
PRPF4-201ENST00000374198 DSCAML1Q8TD84 2053 aa10.09□□□□□ -0.79
PRPF4-201ENST00000374198 IGLC6P0CF74 106 aa10.09□□□□□ -0.79
PRPF4-201ENST00000374198 EGR2P11161 476 aaPredicted RBP10.09□□□□□ -0.79
PRPF4-201ENST00000374198 ANKRD29Q8N6D5 301 aa10.09□□□□□ -0.79
PRPF4-201ENST00000374198 TPSG1Q9NRR2 321 aa10.09□□□□□ -0.79
PRPF4-201ENST00000374198 HIF1ANQ9NWT6 349 aa10.09□□□□□ -0.79
PRPF4-201ENST00000374198 TCL1BO95988 128 aa10.09□□□□□ -0.79
PRPF4-201ENST00000374198 LGALS1P09382 135 aaKnown RBP10.09□□□□□ -0.79
PRPF4-201ENST00000374198 TTC32Q5I0X7 151 aa10.09□□□□□ -0.79
PRPF4-201ENST00000374198 IGLV2-18A0A075B6J9 118 aa10.08□□□□□ -0.8
PRPF4-201ENST00000374198 IFITM1P13164 125 aa10.08□□□□□ -0.8
PRPF4-201ENST00000374198 GATA1P15976 413 aaPredicted RBP10.08□□□□□ -0.8
PRPF4-201ENST00000374198 ATP1A1-AS1Q5TC04 95 aa10.08□□□□□ -0.8
PRPF4-201ENST00000374198 SHANK2-AS3Q9BTD1 123 aa10.08□□□□□ -0.8
PRPF4-201ENST00000374198 H3BVH4 76 aa10.08□□□□□ -0.8
PRPF4-201ENST00000374198 SNCGO76070 127 aa10.08□□□□□ -0.8
PRPF4-201ENST00000374198 MRGPRG-AS1Q2M3A8 158 aa10.08□□□□□ -0.8
PRPF4-201ENST00000374198 ZFHX4Q86UP3 3567 aa10.08□□□□□ -0.8
PRPF4-201ENST00000374198 ARFGEF3Q5TH69 2177 aa10.07□□□□□ -0.8
PRPF4-201ENST00000374198 CHD6Q8TD26 2715 aa10.07□□□□□ -0.8
PRPF4-201ENST00000374198 TRAV4A0A0B4J268 109 aa10.07□□□□□ -0.8
PRPF4-201ENST00000374198 CENPVL3A0A0U1RRI6 287 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms