RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 SIVA1O15304 175 aa11.58□□□□□ -0.56
COL9A2-202ENST00000372748 ZNF80P51504 273 aaPredicted RBP11.58□□□□□ -0.56
COL9A2-202ENST00000372748 RPEQ96AT9 228 aa11.58□□□□□ -0.56
COL9A2-202ENST00000372748 EVI2AP22794 236 aa11.58□□□□□ -0.56
COL9A2-202ENST00000372748 LYPD1Q8N2G4 141 aa11.58□□□□□ -0.56
COL9A2-202ENST00000372748 RALYQ9UKM9 306 aaKnown RBP11.58□□□□□ -0.56
COL9A2-202ENST00000372748 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.57□□□□□ -0.56
COL9A2-202ENST00000372748 SMIM13P0DJ93 91 aa11.57□□□□□ -0.56
COL9A2-202ENST00000372748 OR5A1Q8NGJ0 315 aa11.57□□□□□ -0.56
COL9A2-202ENST00000372748 SVEP1Q4LDE5 3571 aa11.57□□□□□ -0.56
COL9A2-202ENST00000372748 IGHV3OR16-8A0A075B7F1 116 aa11.57□□□□□ -0.56
COL9A2-202ENST00000372748 TEX48A0A1B0GUV7 120 aa11.57□□□□□ -0.56
COL9A2-202ENST00000372748 IGHV3-23P01764 117 aa11.57□□□□□ -0.56
COL9A2-202ENST00000372748 COL12A1Q99715 3063 aa11.57□□□□□ -0.56
COL9A2-202ENST00000372748 ZNF207O43670 478 aaKnown RBP11.57□□□□□ -0.56
COL9A2-202ENST00000372748 GNG7O60262 68 aa11.57□□□□□ -0.56
COL9A2-202ENST00000372748 LY6HO94772 140 aa11.57□□□□□ -0.56
COL9A2-202ENST00000372748 PRSS1P07477 247 aa11.57□□□□□ -0.56
COL9A2-202ENST00000372748 LEPP41159 167 aa11.57□□□□□ -0.56
COL9A2-202ENST00000372748 GATA1P15976 413 aaPredicted RBP11.56□□□□□ -0.56
COL9A2-202ENST00000372748 HLA-DMBP28068 263 aa11.56□□□□□ -0.56
COL9A2-202ENST00000372748 PPIFP30405 207 aaKnown RBP11.56□□□□□ -0.56
COL9A2-202ENST00000372748 GTSCR1Q86UQ5 136 aa11.56□□□□□ -0.56
COL9A2-202ENST00000372748 VGLL1Q99990 258 aa11.56□□□□□ -0.56
COL9A2-202ENST00000372748 COL6A6A6NMZ7 2263 aa11.56□□□□□ -0.56
COL9A2-202ENST00000372748 GRNP28799 593 aaKnown RBP11.56□□□□□ -0.56
COL9A2-202ENST00000372748 PRR25Q96S07 402 aa11.56□□□□□ -0.56
COL9A2-202ENST00000372748 CD3EP07766 207 aa11.55□□□□□ -0.56
COL9A2-202ENST00000372748 NHP2Q9NX24 153 aaKnown RBP11.55□□□□□ -0.56
COL9A2-202ENST00000372748 HHLA3Q9XRX5 114 aa11.55□□□□□ -0.56
COL9A2-202ENST00000372748 PPIAL4CA0A0B4J2A2 164 aa11.55□□□□□ -0.56
COL9A2-202ENST00000372748 TIMM23O14925 209 aa11.55□□□□□ -0.56
COL9A2-202ENST00000372748 ORM1P02763 201 aa11.55□□□□□ -0.56
COL9A2-202ENST00000372748 PPIAL4GP0DN37 164 aa11.55□□□□□ -0.56
COL9A2-202ENST00000372748 CHAC1Q9BUX1 264 aa11.55□□□□□ -0.56
COL9A2-202ENST00000372748 FAM90A27PA6NNH2 459 aa11.54□□□□□ -0.56
COL9A2-202ENST00000372748 ODF1Q14990 250 aa11.54□□□□□ -0.56
COL9A2-202ENST00000372748 ZNF562Q6V9R5 426 aa11.54□□□□□ -0.56
COL9A2-202ENST00000372748 IGHV3-35A0A0C4DH35 117 aa11.54□□□□□ -0.56
COL9A2-202ENST00000372748 MAP1LC3AQ9H492 121 aa11.54□□□□□ -0.56
COL9A2-202ENST00000372748 ONECUT1Q9UBC0 465 aa11.54□□□□□ -0.56
COL9A2-202ENST00000372748 ANKHD1Q8IWZ3 2542 aaKnown RBP11.54□□□□□ -0.56
COL9A2-202ENST00000372748 B9A039 149 aa11.53□□□□□ -0.56
COL9A2-202ENST00000372748 CACNA1BQ00975 2339 aa11.53□□□□□ -0.56
COL9A2-202ENST00000372748 RNF185Q96GF1 192 aa11.53□□□□□ -0.56
COL9A2-202ENST00000372748 GTSF1LQ9H1H1 148 aa11.53□□□□□ -0.56
COL9A2-202ENST00000372748 ZNF575Q86XF7 245 aa11.53□□□□□ -0.56
COL9A2-202ENST00000372748 FOXC2Q99958 501 aa11.53□□□□□ -0.56
COL9A2-202ENST00000372748 MED13LQ71F56 2210 aa11.53□□□□□ -0.56
COL9A2-202ENST00000372748 TRBV25-1A0A075B6N4 114 aa11.53□□□□□ -0.56
COL9A2-202ENST00000372748 ZC2HC1BQ5TFG8 222 aa11.53□□□□□ -0.56
COL9A2-202ENST00000372748 SAMD13Q5VXD3 122 aa11.52□□□□□ -0.57
COL9A2-202ENST00000372748 TNFRSF14Q92956 283 aa11.52□□□□□ -0.57
COL9A2-202ENST00000372748 TNFRSF6BO95407 300 aa11.52□□□□□ -0.57
COL9A2-202ENST00000372748 PDE6HQ13956 83 aa11.52□□□□□ -0.57
COL9A2-202ENST00000372748 TMEM160Q9NX00 188 aa11.52□□□□□ -0.57
COL9A2-202ENST00000372748 TMEM238LA0A1B0GVL6 79 aa11.51□□□□□ -0.57
COL9A2-202ENST00000372748 IGKCP01834 107 aa11.51□□□□□ -0.57
COL9A2-202ENST00000372748 IGLC6P0CF74 106 aa11.51□□□□□ -0.57
COL9A2-202ENST00000372748 MTURNQ8N3F0 131 aa11.51□□□□□ -0.57
COL9A2-202ENST00000372748 TMEM158Q8WZ71 300 aa11.51□□□□□ -0.57
COL9A2-202ENST00000372748 SMAGPQ0VAQ4 97 aa11.51□□□□□ -0.57
COL9A2-202ENST00000372748 ACACBO00763 2458 aa11.51□□□□□ -0.57
COL9A2-202ENST00000372748 TMEM8BA6NDV4 472 aa11.5□□□□□ -0.57
COL9A2-202ENST00000372748 FCER1GP30273 86 aa11.5□□□□□ -0.57
COL9A2-202ENST00000372748 ERCC8Q13216 396 aa11.5□□□□□ -0.57
COL9A2-202ENST00000372748 HES1Q14469 280 aa11.5□□□□□ -0.57
COL9A2-202ENST00000372748 TRAV40A0A0B4J280 105 aa11.5□□□□□ -0.57
COL9A2-202ENST00000372748 SMIM17P0DL12 118 aa11.5□□□□□ -0.57
COL9A2-202ENST00000372748 WFDC2Q14508 124 aa11.5□□□□□ -0.57
COL9A2-202ENST00000372748 ZNF672Q499Z4 452 aaPredicted RBP11.5□□□□□ -0.57
COL9A2-202ENST00000372748 PHLDA1Q8WV24 401 aaPredicted RBP11.5□□□□□ -0.57
COL9A2-202ENST00000372748 AZU1P20160 251 aa11.5□□□□□ -0.57
COL9A2-202ENST00000372748 FANCD2OSQ96PS1 177 aa11.5□□□□□ -0.57
COL9A2-202ENST00000372748 F8W735 103 aaPredicted RBP11.49□□□□□ -0.57
COL9A2-202ENST00000372748 BMI1P35226 326 aa11.49□□□□□ -0.57
COL9A2-202ENST00000372748 KLRD1Q13241 179 aa11.49□□□□□ -0.57
COL9A2-202ENST00000372748 AMTNQ6UX39 209 aa11.49□□□□□ -0.57
COL9A2-202ENST00000372748 MAPKAPK5-AS1Q8N8E1 139 aa11.49□□□□□ -0.57
COL9A2-202ENST00000372748 ZMAT4Q9H898 229 aa11.49□□□□□ -0.57
COL9A2-202ENST00000372748 NBR2O15453 112 aa11.49□□□□□ -0.57
COL9A2-202ENST00000372748 IGHG4P01861 327 aa11.49□□□□□ -0.57
COL9A2-202ENST00000372748 MFAP4P55083 255 aa11.48□□□□□ -0.57
COL9A2-202ENST00000372748 CEND1Q8N111 149 aa11.48□□□□□ -0.57
COL9A2-202ENST00000372748 RAB1BQ9H0U4 201 aa11.48□□□□□ -0.57
COL9A2-202ENST00000372748 HIGD1BQ9P298 99 aa11.48□□□□□ -0.57
COL9A2-202ENST00000372748 SMAD5-AS1Q9Y6J3 95 aa11.48□□□□□ -0.57
COL9A2-202ENST00000372748 ASH1LQ9NR48 2969 aaKnown RBP11.48□□□□□ -0.57
COL9A2-202ENST00000372748 AGRNO00468 2067 aa11.48□□□□□ -0.57
COL9A2-202ENST00000372748 TRAV26-2A0A0B4J265 109 aa11.48□□□□□ -0.57
COL9A2-202ENST00000372748 PRAC2D3DTV9 90 aa11.48□□□□□ -0.57
COL9A2-202ENST00000372748 H3BMG7 143 aa11.48□□□□□ -0.57
COL9A2-202ENST00000372748 RPL7P18124 248 aaKnown RBP11.48□□□□□ -0.57
COL9A2-202ENST00000372748 SH2D6Q7Z4S9 175 aa11.48□□□□□ -0.57
COL9A2-202ENST00000372748 VKORC1Q9BQB6 163 aa11.48□□□□□ -0.57
COL9A2-202ENST00000372748 MRPL35Q9NZE8 188 aaKnown RBP11.48□□□□□ -0.57
COL9A2-202ENST00000372748 TSSC4Q9Y5U2 329 aaPredicted RBP11.48□□□□□ -0.57
COL9A2-202ENST00000372748 DPM2O94777 84 aa11.47□□□□□ -0.57
COL9A2-202ENST00000372748 CDSNQ15517 529 aa11.47□□□□□ -0.57
COL9A2-202ENST00000372748 DTX2Q86UW9 622 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms