RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 ESM1Q9NQ30 184 aa14.51□□□□□ -0.09
SNX27-202ENST00000368841 RTTNQ86VV8 2226 aa14.51□□□□□ -0.09
SNX27-202ENST00000368841 MYO7BQ6PIF6 2116 aa14.51□□□□□ -0.09
SNX27-202ENST00000368841 K7ENP7 123 aa14.51□□□□□ -0.09
SNX27-202ENST00000368841 APRG1Q8IVJ8 170 aa14.51□□□□□ -0.09
SNX27-202ENST00000368841 C2orf66Q6UXQ4 117 aa14.51□□□□□ -0.09
SNX27-202ENST00000368841 MED12Q93074 2177 aa14.51□□□□□ -0.09
SNX27-202ENST00000368841 ADCYAP1P18509 176 aa14.51□□□□□ -0.09
SNX27-202ENST00000368841 C17orf58Q2M2W7 97 aa14.51□□□□□ -0.09
SNX27-202ENST00000368841 FAM231BA6NCW3 169 aa14.5□□□□□ -0.09
SNX27-202ENST00000368841 AHCTF1Q8WYP5 2266 aa14.5□□□□□ -0.09
SNX27-202ENST00000368841 APOC4P55056 127 aa14.5□□□□□ -0.09
SNX27-202ENST00000368841 C17orf77Q96MU5 243 aa14.5□□□□□ -0.09
SNX27-202ENST00000368841 SOCS3O14543 225 aa14.5□□□□□ -0.09
SNX27-202ENST00000368841 MMP23AO75900 390 aa14.5□□□□□ -0.09
SNX27-202ENST00000368841 WDR86Q86TI4 376 aa14.5□□□□□ -0.09
SNX27-202ENST00000368841 UBE2BP63146 152 aa14.49□□□□□ -0.09
SNX27-202ENST00000368841 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.49□□□□□ -0.09
SNX27-202ENST00000368841 IGKV2-29A2NJV5 120 aaPredicted RBP14.49□□□□□ -0.09
SNX27-202ENST00000368841 PYY3Q5JQD4 70 aa14.49□□□□□ -0.09
SNX27-202ENST00000368841 Q6ZR03 302 aa14.49□□□□□ -0.09
SNX27-202ENST00000368841 DKK4Q9UBT3 224 aa14.49□□□□□ -0.09
SNX27-202ENST00000368841 CLPSL1A2RUU4 121 aa14.49□□□□□ -0.09
SNX27-202ENST00000368841 LYPD1Q8N2G4 141 aa14.49□□□□□ -0.09
SNX27-202ENST00000368841 CRIPAKQ8N1N5 446 aa14.49□□□□□ -0.09
SNX27-202ENST00000368841 IGHV4-28A0A0C4DH34 117 aa14.49□□□□□ -0.09
SNX27-202ENST00000368841 IGHG3P01860 377 aa14.49□□□□□ -0.09
SNX27-202ENST00000368841 OVOL2Q9BRP0 275 aa14.49□□□□□ -0.09
SNX27-202ENST00000368841 HELZP42694 1942 aaKnown RBP14.49□□□□□ -0.09
SNX27-202ENST00000368841 POLR3KQ9Y2Y1 108 aaPredicted RBP14.49□□□□□ -0.09
SNX27-202ENST00000368841 GNRH2O43555 120 aa14.48□□□□□ -0.09
SNX27-202ENST00000368841 NDUFS7O75251 213 aa14.48□□□□□ -0.09
SNX27-202ENST00000368841 EREGO14944 169 aa14.48□□□□□ -0.09
SNX27-202ENST00000368841 GRNP28799 593 aaKnown RBP14.48□□□□□ -0.09
SNX27-202ENST00000368841 SDHAF1A6NFY7 115 aa14.48□□□□□ -0.09
SNX27-202ENST00000368841 CRYGCP07315 174 aa14.48□□□□□ -0.09
SNX27-202ENST00000368841 ZNF124Q15973 351 aa14.48□□□□□ -0.09
SNX27-202ENST00000368841 DLEU1O43261 78 aa14.47□□□□□ -0.09
SNX27-202ENST00000368841 NDUFS8O00217 210 aa14.47□□□□□ -0.09
SNX27-202ENST00000368841 C9orf153Q5TBE3 101 aa14.47□□□□□ -0.09
SNX27-202ENST00000368841 TRAV1-1A0A0B4J248 108 aa14.47□□□□□ -0.09
SNX27-202ENST00000368841 ZMAT4Q9H898 229 aa14.47□□□□□ -0.09
SNX27-202ENST00000368841 ZNF833PQ6ZTB9 187 aa14.47□□□□□ -0.09
SNX27-202ENST00000368841 NDUFA4L2Q9NRX3 87 aa14.47□□□□□ -0.09
SNX27-202ENST00000368841 NRGNQ92686 78 aa14.47□□□□□ -0.09
SNX27-202ENST00000368841 WDR81Q562E7 1941 aa14.46□□□□□ -0.09
SNX27-202ENST00000368841 CDKN1BP46527 198 aa14.46□□□□□ -0.09
SNX27-202ENST00000368841 IGHV1-24A0A0C4DH33 117 aa14.46□□□□□ -0.09
SNX27-202ENST00000368841 C9JQL5 133 aa14.46□□□□□ -0.09
SNX27-202ENST00000368841 FGF6P10767 208 aa14.46□□□□□ -0.09
SNX27-202ENST00000368841 ZSWIM8A7E2V4 1837 aa14.46□□□□□ -0.09
SNX27-202ENST00000368841 PRSS46E5RG02 174 aa14.46□□□□□ -0.09
SNX27-202ENST00000368841 ZC2HC1AQ96GY0 325 aa14.46□□□□□ -0.09
SNX27-202ENST00000368841 TMEM14BQ9NUH8 114 aa14.46□□□□□ -0.09
SNX27-202ENST00000368841 SLAQ13239 276 aa14.46□□□□□ -0.1
SNX27-202ENST00000368841 A0A1B0GW64 132 aa14.45□□□□□ -0.1
SNX27-202ENST00000368841 TRBV19A0A075B6N1 114 aa14.45□□□□□ -0.1
SNX27-202ENST00000368841 LINC01549A6NIU2 74 aa14.45□□□□□ -0.1
SNX27-202ENST00000368841 DSCR8Q96T75 97 aa14.45□□□□□ -0.1
SNX27-202ENST00000368841 J3QKU1 62 aa14.45□□□□□ -0.1
SNX27-202ENST00000368841 C17orf82Q86X59 251 aaPredicted RBP14.45□□□□□ -0.1
SNX27-202ENST00000368841 IGLV10-54A0A075B6I4 117 aa14.45□□□□□ -0.1
SNX27-202ENST00000368841 IGHV4-59P01825 116 aa14.45□□□□□ -0.1
SNX27-202ENST00000368841 E9PQ18 207 aa14.45□□□□□ -0.1
SNX27-202ENST00000368841 Q8N8P6 123 aa14.45□□□□□ -0.1
SNX27-202ENST00000368841 PLXND1Q9Y4D7 1925 aa14.44□□□□□ -0.1
SNX27-202ENST00000368841 TRBV6-6A0A0A6YYG2 114 aa14.44□□□□□ -0.1
SNX27-202ENST00000368841 IGHV3-30P01768 117 aa14.44□□□□□ -0.1
SNX27-202ENST00000368841 IGHV3-33P01772 117 aa14.44□□□□□ -0.1
SNX27-202ENST00000368841 IGHV3-30-3P0DP02 117 aa14.44□□□□□ -0.1
SNX27-202ENST00000368841 IGHV3-30-5P0DP03 117 aa14.44□□□□□ -0.1
SNX27-202ENST00000368841 MRPL27Q9P0M9 148 aaKnown RBP14.44□□□□□ -0.1
SNX27-202ENST00000368841 VWA8A3KMH1 1905 aa14.44□□□□□ -0.1
SNX27-202ENST00000368841 MYLKQ15746 1914 aa14.44□□□□□ -0.1
SNX27-202ENST00000368841 HOXB4P17483 251 aaPredicted RBP14.44□□□□□ -0.1
SNX27-202ENST00000368841 SLURP1P55000 103 aa14.44□□□□□ -0.1
SNX27-202ENST00000368841 UBE2V1Q13404 147 aa14.44□□□□□ -0.1
SNX27-202ENST00000368841 MAJINQ3KP22 176 aa14.43□□□□□ -0.1
SNX27-202ENST00000368841 SPRNQ5BIV9 151 aa14.43□□□□□ -0.1
SNX27-202ENST00000368841 FAM104BQ5XKR9 115 aa14.43□□□□□ -0.1
SNX27-202ENST00000368841 C18orf32Q8TCD1 76 aa14.43□□□□□ -0.1
SNX27-202ENST00000368841 TMEM141Q96I45 108 aa14.43□□□□□ -0.1
SNX27-202ENST00000368841 FOXE3Q13461 319 aa14.43□□□□□ -0.1
SNX27-202ENST00000368841 GFRA4Q9GZZ7 299 aa14.43□□□□□ -0.1
SNX27-202ENST00000368841 ZNF726P1Q15940 193 aa14.43□□□□□ -0.1
SNX27-202ENST00000368841 DEFB112Q30KQ8 113 aa14.42□□□□□ -0.1
SNX27-202ENST00000368841 ZNF134P52741 427 aa14.42□□□□□ -0.1
SNX27-202ENST00000368841 KLF2Q9Y5W3 355 aaPredicted RBP14.42□□□□□ -0.1
SNX27-202ENST00000368841 TSC2P49815 1807 aa14.42□□□□□ -0.1
SNX27-202ENST00000368841 IGHG4P01861 327 aa14.42□□□□□ -0.1
SNX27-202ENST00000368841 LOXP28300 417 aaPredicted RBP14.42□□□□□ -0.1
SNX27-202ENST00000368841 FNDC1Q4ZHG4 1894 aaPredicted RBP14.42□□□□□ -0.1
SNX27-202ENST00000368841 H3BRN7 92 aa14.42□□□□□ -0.1
SNX27-202ENST00000368841 SRSF8Q9BRL6 282 aaKnown RBP14.42□□□□□ -0.1
SNX27-202ENST00000368841 NDUFA12Q9UI09 145 aa14.42□□□□□ -0.1
SNX27-202ENST00000368841 NPYP01303 97 aa14.42□□□□□ -0.1
SNX27-202ENST00000368841 LINC01559Q495D7 138 aa14.41□□□□□ -0.1
SNX27-202ENST00000368841 CACNA1DQ01668 2161 aa14.41□□□□□ -0.1
SNX27-202ENST00000368841 U3KQE9 123 aa14.41□□□□□ -0.1
SNX27-202ENST00000368841 SIGLEC8Q9NYZ4 499 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms