RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 CLEC2BQ92478 149 aa0.42□□□□□ -2.34
ECHDC1-201ENST00000368287 EFCAB11Q9BUY7 163 aa0.42□□□□□ -2.34
ECHDC1-201ENST00000368287 FKBP11Q9NYL4 201 aa0.42□□□□□ -2.34
ECHDC1-201ENST00000368287 HSPB8Q9UJY1 196 aa0.42□□□□□ -2.34
ECHDC1-201ENST00000368287 KIAA1549LQ6ZVL6 1849 aa0.42□□□□□ -2.34
ECHDC1-201ENST00000368287 PBRM1Q86U86 1689 aa0.42□□□□□ -2.34
ECHDC1-201ENST00000368287 NINQ8N4C6 2090 aa0.42□□□□□ -2.34
ECHDC1-201ENST00000368287 FER1L6Q2WGJ9 1857 aa0.41□□□□□ -2.34
ECHDC1-201ENST00000368287 KIAA1107Q9UPP5 1409 aa0.41□□□□□ -2.34
ECHDC1-201ENST00000368287 A0A0J9YY99 117 aa0.41□□□□□ -2.34
ECHDC1-201ENST00000368287 C3orf85A0A1B0GTC6 90 aa0.41□□□□□ -2.34
ECHDC1-201ENST00000368287 FABP1P07148 127 aa0.41□□□□□ -2.34
ECHDC1-201ENST00000368287 BCL2P10415 239 aa0.41□□□□□ -2.34
ECHDC1-201ENST00000368287 PDE6GP18545 87 aa0.41□□□□□ -2.34
ECHDC1-201ENST00000368287 FOXA3P55318 350 aaPredicted RBP0.41□□□□□ -2.34
ECHDC1-201ENST00000368287 SPINK9Q5DT21 86 aa0.41□□□□□ -2.34
ECHDC1-201ENST00000368287 CCL19Q99731 98 aa0.41□□□□□ -2.34
ECHDC1-201ENST00000368287 LAMTOR3Q9UHA4 124 aa0.41□□□□□ -2.34
ECHDC1-201ENST00000368287 ROCK1Q13464 1354 aa0.41□□□□□ -2.34
ECHDC1-201ENST00000368287 USP24Q9UPU5 2620 aa0.4□□□□□ -2.34
ECHDC1-201ENST00000368287 MUC5ACP98088 5654 aa0.4□□□□□ -2.35
ECHDC1-201ENST00000368287 RPL7P18124 248 aaKnown RBP0.4□□□□□ -2.35
ECHDC1-201ENST00000368287 SDC2P34741 201 aa0.4□□□□□ -2.35
ECHDC1-201ENST00000368287 LINC00305Q7Z4B0 112 aa0.4□□□□□ -2.35
ECHDC1-201ENST00000368287 OR4B1Q8NGF8 309 aa0.4□□□□□ -2.35
ECHDC1-201ENST00000368287 ISOC1Q96CN7 298 aa0.4□□□□□ -2.35
ECHDC1-201ENST00000368287 PRELID3AQ96N28 172 aa0.4□□□□□ -2.35
ECHDC1-201ENST00000368287 NABP2Q9BQ15 211 aa0.4□□□□□ -2.35
ECHDC1-201ENST00000368287 LPAR5Q9H1C0 372 aa0.4□□□□□ -2.35
ECHDC1-201ENST00000368287 LOC285556D6RIA3 1793 aa0.4□□□□□ -2.35
ECHDC1-201ENST00000368287 DLC1Q96QB1 1528 aa0.39□□□□□ -2.35
ECHDC1-201ENST00000368287 NAV3Q8IVL0 2385 aa0.39□□□□□ -2.35
ECHDC1-201ENST00000368287 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.39□□□□□ -2.35
ECHDC1-201ENST00000368287 LOC107984156A0A0G2JMH3 177 aa0.39□□□□□ -2.35
ECHDC1-201ENST00000368287 C5orf58C9J3I9 102 aa0.39□□□□□ -2.35
ECHDC1-201ENST00000368287 TRACP01848 142 aa0.39□□□□□ -2.35
ECHDC1-201ENST00000368287 PRH1P02810 166 aa0.39□□□□□ -2.35
ECHDC1-201ENST00000368287 S100A5P33763 92 aa0.39□□□□□ -2.35
ECHDC1-201ENST00000368287 SPINT3P49223 89 aa0.39□□□□□ -2.35
ECHDC1-201ENST00000368287 CSAG1Q6PB30 78 aa0.39□□□□□ -2.35
ECHDC1-201ENST00000368287 CASC2Q6XLA1 102 aa0.39□□□□□ -2.35
ECHDC1-201ENST00000368287 Q6ZQY7 126 aa0.39□□□□□ -2.35
ECHDC1-201ENST00000368287 LINC00299Q6ZSB3 139 aa0.39□□□□□ -2.35
ECHDC1-201ENST00000368287 ARL17AQ8IVW1 177 aa0.39□□□□□ -2.35
ECHDC1-201ENST00000368287 PLAC4Q8WY50 150 aa0.39□□□□□ -2.35
ECHDC1-201ENST00000368287 MCEEQ96PE7 176 aa0.39□□□□□ -2.35
ECHDC1-201ENST00000368287 SMPXQ9UHP9 88 aa0.39□□□□□ -2.35
ECHDC1-201ENST00000368287 TRAPPC2LQ9UL33 140 aa0.39□□□□□ -2.35
ECHDC1-201ENST00000368287 BOKQ9UMX3 212 aaPredicted RBP0.39□□□□□ -2.35
ECHDC1-201ENST00000368287 TCOF1Q13428 1488 aaKnown RBP0.39□□□□□ -2.35
ECHDC1-201ENST00000368287 FAM135BQ49AJ0 1406 aa0.38□□□□□ -2.35
ECHDC1-201ENST00000368287 MYH1P12882 1939 aa0.38□□□□□ -2.35
ECHDC1-201ENST00000368287 MEGF8Q7Z7M0 2845 aa0.38□□□□□ -2.35
ECHDC1-201ENST00000368287 KRTAP2-3P0C7H8 128 aa0.38□□□□□ -2.35
ECHDC1-201ENST00000368287 MAXP61244 160 aa0.38□□□□□ -2.35
ECHDC1-201ENST00000368287 C5orf17Q8NAS9 161 aa0.38□□□□□ -2.35
ECHDC1-201ENST00000368287 OR5AK2Q8NH90 309 aa0.38□□□□□ -2.35
ECHDC1-201ENST00000368287 THEM6Q8WUY1 208 aa0.38□□□□□ -2.35
ECHDC1-201ENST00000368287 CCDC32Q9BV29 185 aa0.38□□□□□ -2.35
ECHDC1-201ENST00000368287 KRTAP2-4Q9BYR9 128 aa0.38□□□□□ -2.35
ECHDC1-201ENST00000368287 KRTAP2-1Q9BYU5 128 aa0.38□□□□□ -2.35
ECHDC1-201ENST00000368287 MED31Q9Y3C7 131 aa0.38□□□□□ -2.35
ECHDC1-201ENST00000368287 ZCCHC11Q5TAX3 1644 aaKnown RBP0.38□□□□□ -2.35
ECHDC1-201ENST00000368287 TRBV27A0A0K0K1C4 114 aa0.37□□□□□ -2.35
ECHDC1-201ENST00000368287 PHGR1C9JFL3 82 aa0.37□□□□□ -2.35
ECHDC1-201ENST00000368287 POLR2HP52434 150 aaKnown RBP0.37□□□□□ -2.35
ECHDC1-201ENST00000368287 ZNF137PP52743 207 aa0.37□□□□□ -2.35
ECHDC1-201ENST00000368287 NDUFA6P56556 154 aa0.37□□□□□ -2.35
ECHDC1-201ENST00000368287 QRFPP83859 136 aa0.37□□□□□ -2.35
ECHDC1-201ENST00000368287 C6orf52Q5T4I8 152 aa0.37□□□□□ -2.35
ECHDC1-201ENST00000368287 GRPEL2Q8TAA5 225 aa0.37□□□□□ -2.35
ECHDC1-201ENST00000368287 ATPIF1Q9UII2 106 aa0.37□□□□□ -2.35
ECHDC1-201ENST00000368287 LAMTOR2Q9Y2Q5 125 aa0.37□□□□□ -2.35
ECHDC1-201ENST00000368287 ATG2AQ2TAZ0 1938 aa0.36□□□□□ -2.35
ECHDC1-201ENST00000368287 TRAV13-1A0A0B4J241 112 aa0.36□□□□□ -2.35
ECHDC1-201ENST00000368287 LOC107984640A0A0U1RRK4 108 aa0.36□□□□□ -2.35
ECHDC1-201ENST00000368287 H3BMG7 143 aa0.36□□□□□ -2.35
ECHDC1-201ENST00000368287 M0QZK8 103 aa0.36□□□□□ -2.35
ECHDC1-201ENST00000368287 IGHV3-30P01768 117 aa0.36□□□□□ -2.35
ECHDC1-201ENST00000368287 IGHV3-30-5P0DP03 117 aa0.36□□□□□ -2.35
ECHDC1-201ENST00000368287 TPT1P13693 172 aaKnown RBP0.36□□□□□ -2.35
ECHDC1-201ENST00000368287 RPS3P23396 243 aaKnown RBP eCLIP0.36□□□□□ -2.35
ECHDC1-201ENST00000368287 ATOH7Q8N100 152 aa0.36□□□□□ -2.35
ECHDC1-201ENST00000368287 MORN4Q8NDC4 146 aa0.36□□□□□ -2.35
ECHDC1-201ENST00000368287 CIB3Q96Q77 187 aaPredicted RBP0.36□□□□□ -2.35
ECHDC1-201ENST00000368287 SMR3AQ99954 134 aa0.36□□□□□ -2.35
ECHDC1-201ENST00000368287 FAM103A1Q9BTL3 118 aaKnown RBP0.36□□□□□ -2.35
ECHDC1-201ENST00000368287 CBLN4Q9NTU7 201 aa0.36□□□□□ -2.35
ECHDC1-201ENST00000368287 FGD6Q6ZV73 1430 aa0.36□□□□□ -2.35
ECHDC1-201ENST00000368287 XIRP1Q702N8 1843 aaKnown RBP0.36□□□□□ -2.35
ECHDC1-201ENST00000368287 DSPPQ9NZW4 1301 aa0.36□□□□□ -2.35
ECHDC1-201ENST00000368287 BCORL1Q5H9F3 1711 aa0.35□□□□□ -2.35
ECHDC1-201ENST00000368287 LY6G6CO95867 125 aa0.35□□□□□ -2.35
ECHDC1-201ENST00000368287 SLC25A4P12235 298 aa0.35□□□□□ -2.35
ECHDC1-201ENST00000368287 CCL4P13236 92 aa0.35□□□□□ -2.35
ECHDC1-201ENST00000368287 CRYGSP22914 178 aa0.35□□□□□ -2.35
ECHDC1-201ENST00000368287 C10orf111Q8N326 155 aa0.35□□□□□ -2.35
ECHDC1-201ENST00000368287 OR51A4Q8NGJ6 313 aa0.35□□□□□ -2.35
ECHDC1-201ENST00000368287 MDN1Q9NU22 5596 aa0.34□□□□□ -2.35
ECHDC1-201ENST00000368287 TRBV7-6A0A0J9YX20 115 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms