RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 ODF3BA8MYP8 253 aa9.6□□□□□ -0.87
PTPN7-202ENST00000367279 G3V318 75 aa9.6□□□□□ -0.87
PTPN7-202ENST00000367279 SFTPCP11686 197 aa9.6□□□□□ -0.87
PTPN7-202ENST00000367279 ADORA2A-AS1P86434 159 aa9.6□□□□□ -0.87
PTPN7-202ENST00000367279 PRSS57Q6UWY2 283 aa9.6□□□□□ -0.87
PTPN7-202ENST00000367279 AP1S3Q96PC3 154 aa9.6□□□□□ -0.87
PTPN7-202ENST00000367279 LINC00527Q9UJ94 153 aa9.6□□□□□ -0.87
PTPN7-202ENST00000367279 HBDP02042 147 aa9.59□□□□□ -0.87
PTPN7-202ENST00000367279 COX8AP10176 69 aa9.59□□□□□ -0.87
PTPN7-202ENST00000367279 NCOR2Q9Y618 2525 aa9.59□□□□□ -0.87
PTPN7-202ENST00000367279 A0A096LNJ9 63 aa9.59□□□□□ -0.87
PTPN7-202ENST00000367279 GAS8-AS1O95177 125 aa9.59□□□□□ -0.87
PTPN7-202ENST00000367279 NBL1P41271 181 aa9.59□□□□□ -0.87
PTPN7-202ENST00000367279 TM4SF20Q53R12 229 aa9.59□□□□□ -0.87
PTPN7-202ENST00000367279 IGHV2-70DA0A0C4DH43 119 aa9.58□□□□□ -0.88
PTPN7-202ENST00000367279 GATA1P15976 413 aaPredicted RBP9.58□□□□□ -0.88
PTPN7-202ENST00000367279 IL17RELQ6ZVW7 336 aa9.58□□□□□ -0.88
PTPN7-202ENST00000367279 RAB37Q96AX2 223 aa9.58□□□□□ -0.88
PTPN7-202ENST00000367279 IFI27L1Q96BM0 104 aa9.58□□□□□ -0.88
PTPN7-202ENST00000367279 ATP6V0E1O15342 81 aa9.58□□□□□ -0.88
PTPN7-202ENST00000367279 UFC1Q9Y3C8 167 aa9.58□□□□□ -0.88
PTPN7-202ENST00000367279 FABP5P3A8MUU1 101 aa9.58□□□□□ -0.88
PTPN7-202ENST00000367279 PRSS1P07477 247 aa9.58□□□□□ -0.88
PTPN7-202ENST00000367279 ZNF493Q6ZR52 646 aa9.58□□□□□ -0.88
PTPN7-202ENST00000367279 DEFB125Q8N687 156 aa9.58□□□□□ -0.88
PTPN7-202ENST00000367279 SPTBN4Q9H254 2564 aa9.58□□□□□ -0.88
PTPN7-202ENST00000367279 C7orf71A4D174 169 aa9.57□□□□□ -0.88
PTPN7-202ENST00000367279 LINC01548A6NM66 108 aa9.57□□□□□ -0.88
PTPN7-202ENST00000367279 GOSR1O95249 250 aa9.57□□□□□ -0.88
PTPN7-202ENST00000367279 TMEM97Q5BJF2 176 aa9.57□□□□□ -0.88
PTPN7-202ENST00000367279 MAP1LC3AQ9H492 121 aa9.57□□□□□ -0.88
PTPN7-202ENST00000367279 LEPP41159 167 aa9.57□□□□□ -0.88
PTPN7-202ENST00000367279 RPS20P60866 119 aaKnown RBP9.57□□□□□ -0.88
PTPN7-202ENST00000367279 TMEM219Q86XT9 240 aa9.57□□□□□ -0.88
PTPN7-202ENST00000367279 DKK2Q9UBU2 259 aa9.57□□□□□ -0.88
PTPN7-202ENST00000367279 CHD8Q9HCK8 2581 aa9.57□□□□□ -0.88
PTPN7-202ENST00000367279 HIVEP3Q5T1R4 2406 aa9.57□□□□□ -0.88
PTPN7-202ENST00000367279 Q8N9W7 124 aa9.57□□□□□ -0.88
PTPN7-202ENST00000367279 PPP1R14DQ9NXH3 145 aa9.57□□□□□ -0.88
PTPN7-202ENST00000367279 MSRB2Q9Y3D2 182 aa9.57□□□□□ -0.88
PTPN7-202ENST00000367279 C2orf91Q6ZV80 131 aa9.56□□□□□ -0.88
PTPN7-202ENST00000367279 TRAV8-6A0A0B4J262 113 aa9.56□□□□□ -0.88
PTPN7-202ENST00000367279 SAA4P35542 130 aa9.56□□□□□ -0.88
PTPN7-202ENST00000367279 MAP1AP78559 2803 aaPredicted RBP9.55□□□□□ -0.88
PTPN7-202ENST00000367279 PCP2Q8IVA1 136 aa9.55□□□□□ -0.88
PTPN7-202ENST00000367279 IGKV3-7A0A075B6H7 116 aa9.55□□□□□ -0.88
PTPN7-202ENST00000367279 CD5LO43866 347 aa9.55□□□□□ -0.88
PTPN7-202ENST00000367279 IGHG4P01861 327 aa9.55□□□□□ -0.88
PTPN7-202ENST00000367279 A1L4Q6 167 aa9.55□□□□□ -0.88
PTPN7-202ENST00000367279 KLRB1Q12918 225 aa9.55□□□□□ -0.88
PTPN7-202ENST00000367279 FBXL19-AS1Q494R0 122 aa9.55□□□□□ -0.88
PTPN7-202ENST00000367279 GATD1Q8NB37 220 aa9.55□□□□□ -0.88
PTPN7-202ENST00000367279 VPS25Q9BRG1 176 aa9.55□□□□□ -0.88
PTPN7-202ENST00000367279 TMEM78Q5T7P6 136 aa9.54□□□□□ -0.88
PTPN7-202ENST00000367279 PIP4P2Q8N4L2 257 aa9.54□□□□□ -0.88
PTPN7-202ENST00000367279 SPG11Q96JI7 2443 aa9.54□□□□□ -0.88
PTPN7-202ENST00000367279 TRAV26-2A0A0B4J265 109 aa9.54□□□□□ -0.88
PTPN7-202ENST00000367279 SPRY2O43597 315 aa9.54□□□□□ -0.88
PTPN7-202ENST00000367279 TNFRSF6BO95407 300 aa9.54□□□□□ -0.88
PTPN7-202ENST00000367279 S100A7P31151 101 aa9.54□□□□□ -0.88
PTPN7-202ENST00000367279 LGALS9BQ3B8N2 356 aa9.54□□□□□ -0.88
PTPN7-202ENST00000367279 MINOS1Q5TGZ0 78 aa9.54□□□□□ -0.88
PTPN7-202ENST00000367279 LGALS9CQ6DKI2 356 aa9.54□□□□□ -0.88
PTPN7-202ENST00000367279 ZNF48Q96MX3 618 aaPredicted RBP9.54□□□□□ -0.88
PTPN7-202ENST00000367279 TTTY13Q9BZ97 58 aa9.54□□□□□ -0.88
PTPN7-202ENST00000367279 PEF1Q9UBV8 284 aaKnown RBP9.54□□□□□ -0.88
PTPN7-202ENST00000367279 MINOS1-NBL1R4GNA1 71 aa9.54□□□□□ -0.88
PTPN7-202ENST00000367279 A0A1W2PPR1 153 aa9.53□□□□□ -0.88
PTPN7-202ENST00000367279 RPL11P62913 178 aaKnown RBP9.53□□□□□ -0.88
PTPN7-202ENST00000367279 C11orf71Q6IPW1 123 aa9.53□□□□□ -0.88
PTPN7-202ENST00000367279 Q6ZQT7 251 aa9.53□□□□□ -0.88
PTPN7-202ENST00000367279 Q8N6K4 173 aa9.53□□□□□ -0.88
PTPN7-202ENST00000367279 U3KQK5 164 aa9.53□□□□□ -0.88
PTPN7-202ENST00000367279 H3BUT2 72 aa9.53□□□□□ -0.88
PTPN7-202ENST00000367279 BUB3O43684 328 aa9.53□□□□□ -0.88
PTPN7-202ENST00000367279 IGLC6P0CF74 106 aa9.53□□□□□ -0.88
PTPN7-202ENST00000367279 ZNF502Q8TBZ5 544 aa9.53□□□□□ -0.88
PTPN7-202ENST00000367279 FOXC2Q99958 501 aa9.53□□□□□ -0.88
PTPN7-202ENST00000367279 GAGE10A6NGK3 116 aa9.53□□□□□ -0.88
PTPN7-202ENST00000367279 TRGV3P03979 118 aa9.53□□□□□ -0.88
PTPN7-202ENST00000367279 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.53□□□□□ -0.88
PTPN7-202ENST00000367279 SMIM15Q7Z3B0 74 aa9.53□□□□□ -0.88
PTPN7-202ENST00000367279 FAM110DQ8TAY7 271 aaPredicted RBP9.53□□□□□ -0.88
PTPN7-202ENST00000367279 METTL26Q96S19 204 aa9.53□□□□□ -0.88
PTPN7-202ENST00000367279 BPESC1Q9GZL8 116 aa9.53□□□□□ -0.88
PTPN7-202ENST00000367279 AGPAT4-IT1Q9H0P7 198 aa9.53□□□□□ -0.88
PTPN7-202ENST00000367279 HIF1ANQ9NWT6 349 aa9.53□□□□□ -0.88
PTPN7-202ENST00000367279 SMAD7O15105 426 aaKnown RBP9.52□□□□□ -0.89
PTPN7-202ENST00000367279 SPANXN1Q5VSR9 72 aa9.52□□□□□ -0.89
PTPN7-202ENST00000367279 C16orf92Q96LL3 132 aa9.52□□□□□ -0.89
PTPN7-202ENST00000367279 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.52□□□□□ -0.893e-6■■□□□ 11.8
PTPN7-202ENST00000367279 OOSP1A8MZH6 123 aa9.52□□□□□ -0.89
PTPN7-202ENST00000367279 RBX1P62877 108 aa9.52□□□□□ -0.89
PTPN7-202ENST00000367279 TMEM158Q8WZ71 300 aa9.52□□□□□ -0.89
PTPN7-202ENST00000367279 RNF185Q96GF1 192 aa9.52□□□□□ -0.89
PTPN7-202ENST00000367279 SIRPDQ9H106 197 aa9.52□□□□□ -0.89
PTPN7-202ENST00000367279 A6NDN8 102 aa9.51□□□□□ -0.89
PTPN7-202ENST00000367279 FBLL1A6NHQ2 334 aaKnown RBP9.51□□□□□ -0.89
PTPN7-202ENST00000367279 LY6DQ14210 128 aa9.51□□□□□ -0.89
PTPN7-202ENST00000367279 DTX2Q86UW9 622 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms