RNA–Protein interactions for RNA: ENST00000367208.1

SNRPE-201, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

TSL 2 BASIC

Gene SNRPE, Length 355 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-201ENST00000367208 DEFB123Q8N688 67 aa0.67□□□□□ -2.3
SNRPE-201ENST00000367208 Q8TAT8 98 aa0.67□□□□□ -2.3
SNRPE-201ENST00000367208 MUCL1Q96DR8 90 aa0.67□□□□□ -2.3
SNRPE-201ENST00000367208 PHB2Q99623 299 aa0.67□□□□□ -2.3
SNRPE-201ENST00000367208 PCNX1Q96RV3 2341 aa0.67□□□□□ -2.3
SNRPE-201ENST00000367208 MYH7P12883 1935 aa0.67□□□□□ -2.3
SNRPE-201ENST00000367208 MYH13Q9UKX3 1938 aa0.67□□□□□ -2.3
SNRPE-201ENST00000367208 FAT4Q6V0I7 4981 aa0.67□□□□□ -2.3
SNRPE-201ENST00000367208 NISCHQ9Y2I1 1504 aa0.67□□□□□ -2.3
SNRPE-201ENST00000367208 USP9YO00507 2555 aaPredicted RBP0.67□□□□□ -2.3
SNRPE-201ENST00000367208 AKAP13Q12802 2813 aa0.67□□□□□ -2.3
SNRPE-201ENST00000367208 TCOF1Q13428 1488 aaKnown RBP0.67□□□□□ -2.3
SNRPE-201ENST00000367208 IGF2RP11717 2491 aa0.66□□□□□ -2.3
SNRPE-201ENST00000367208 PTPRZ1P23471 2315 aaPredicted RBP0.66□□□□□ -2.3
SNRPE-201ENST00000367208 AKAP9Q99996 3911 aa0.66□□□□□ -2.3
SNRPE-201ENST00000367208 DCHS2Q6V1P9 2916 aa0.66□□□□□ -2.3
SNRPE-201ENST00000367208 NCOR1O75376 2440 aa0.66□□□□□ -2.3
SNRPE-201ENST00000367208 COL4A6Q14031 1691 aa0.66□□□□□ -2.3
SNRPE-201ENST00000367208 CDK13Q14004 1512 aaKnown RBP0.66□□□□□ -2.3
SNRPE-201ENST00000367208 CD2P06729 351 aa0.66□□□□□ -2.3
SNRPE-201ENST00000367208 CRHP06850 196 aa0.66□□□□□ -2.3
SNRPE-201ENST00000367208 OR10J4P0C629 311 aa0.66□□□□□ -2.3
SNRPE-201ENST00000367208 CXCL8P10145 99 aa0.66□□□□□ -2.3
SNRPE-201ENST00000367208 MRPS15P82914 257 aaKnown RBP0.66□□□□□ -2.3
SNRPE-201ENST00000367208 CDK6Q00534 326 aa0.66□□□□□ -2.3
SNRPE-201ENST00000367208 C1orf134Q5TEV5 83 aa0.66□□□□□ -2.3
SNRPE-201ENST00000367208 LINC00575Q6W349 94 aa0.66□□□□□ -2.3
SNRPE-201ENST00000367208 POP5Q969H6 163 aaKnown RBP0.66□□□□□ -2.3
SNRPE-201ENST00000367208 PBOV1Q9GZY1 135 aa0.66□□□□□ -2.3
SNRPE-201ENST00000367208 PRNDQ9UKY0 176 aa0.66□□□□□ -2.3
SNRPE-201ENST00000367208 LAMA1P25391 3075 aa0.66□□□□□ -2.3
SNRPE-201ENST00000367208 UNC13CQ8NB66 2214 aa0.66□□□□□ -2.3
SNRPE-201ENST00000367208 EP300Q09472 2414 aaPredicted RBP0.66□□□□□ -2.3
SNRPE-201ENST00000367208 VPS13CQ709C8 3753 aa0.66□□□□□ -2.3
SNRPE-201ENST00000367208 ITPR2Q14571 2701 aa0.66□□□□□ -2.3
SNRPE-201ENST00000367208 C3P01024 1663 aa0.65□□□□□ -2.3
SNRPE-201ENST00000367208 ASCC3Q8N3C0 2202 aaKnown RBP0.65□□□□□ -2.3
SNRPE-201ENST00000367208 NSD1Q96L73 2696 aaPredicted RBP0.65□□□□□ -2.3
SNRPE-201ENST00000367208 MYH9P35579 1960 aaKnown RBP0.65□□□□□ -2.31
SNRPE-201ENST00000367208 CREBBPQ92793 2442 aa0.65□□□□□ -2.31
SNRPE-201ENST00000367208 MTORP42345 2549 aa0.65□□□□□ -2.31
SNRPE-201ENST00000367208 USP32Q8NFA0 1604 aa0.65□□□□□ -2.31
SNRPE-201ENST00000367208 DUXBA0A1W2PPF3 345 aa0.65□□□□□ -2.31
SNRPE-201ENST00000367208 KLF7O75840 302 aaPredicted RBP0.65□□□□□ -2.31
SNRPE-201ENST00000367208 NDUFC2O95298 119 aa0.65□□□□□ -2.31
SNRPE-201ENST00000367208 COX7CP15954 63 aa0.65□□□□□ -2.31
SNRPE-201ENST00000367208 OR5AS1Q8N127 324 aa0.65□□□□□ -2.31
SNRPE-201ENST00000367208 OR5D16Q8NGK9 328 aa0.65□□□□□ -2.31
SNRPE-201ENST00000367208 PSTPIP2Q9H939 334 aa0.65□□□□□ -2.31
SNRPE-201ENST00000367208 TNFSF18Q9UNG2 199 aa0.65□□□□□ -2.31
SNRPE-201ENST00000367208 SPTBN2O15020 2390 aa0.65□□□□□ -2.31
SNRPE-201ENST00000367208 A2MP01023 1474 aa0.65□□□□□ -2.31
SNRPE-201ENST00000367208 CHD9Q3L8U1 2897 aa0.65□□□□□ -2.31
SNRPE-201ENST00000367208 PAPPA2Q9BXP8 1791 aa0.65□□□□□ -2.31
SNRPE-201ENST00000367208 DISP2A7MBM2 1401 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 SHROOM2Q13796 1616 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 SCRIBQ14160 1630 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 PREX2Q70Z35 1606 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 RGPD1P0DJD0 1748 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 ABCA3Q99758 1704 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 SVEP1Q4LDE5 3571 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 APCP25054 2843 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 AIPO00170 330 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 BANF1O75531 89 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 NFYBP25208 207 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 SCGB2B2Q4G0G5 96 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 ZNF431Q8TF32 576 aaPredicted RBP0.64□□□□□ -2.31
SNRPE-201ENST00000367208 SH3BGRL3Q9H299 93 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 POPDC3Q9HBV1 291 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 MED29Q9NX70 200 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 CAMSAP2Q08AD1 1489 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 ZCCHC6Q5VYS8 1495 aaKnown RBP0.64□□□□□ -2.31
SNRPE-201ENST00000367208 IFT140Q96RY7 1462 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 RAPGEF2Q9Y4G8 1499 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 CROCC2H7BZ55 1655 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 ZFC3H1O60293 1989 aaKnown RBP0.64□□□□□ -2.31
SNRPE-201ENST00000367208 PRKDCP78527 4128 aaKnown RBP0.64□□□□□ -2.31
SNRPE-201ENST00000367208 CITO14578 2027 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 PRDM2Q13029 1718 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 SPHKAPQ2M3C7 1700 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 NRXN3Q9Y4C0 1643 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 ZMYM4Q5VZL5 1548 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 ABCC2Q92887 1545 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 KIAA0586Q9BVV6 1533 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 ARHGEF12Q9NZN5 1544 aa0.64□□□□□ -2.31
SNRPE-201ENST00000367208 RBBP6Q7Z6E9 1792 aaKnown RBP0.63□□□□□ -2.31
SNRPE-201ENST00000367208 ZNF142P52746 1687 aaPredicted RBP0.63□□□□□ -2.31
SNRPE-201ENST00000367208 ABCA8O94911 1581 aa0.63□□□□□ -2.31
SNRPE-201ENST00000367208 TEX14Q8IWB6 1497 aa0.63□□□□□ -2.31
SNRPE-201ENST00000367208 EIF3AQ14152 1382 aaKnown RBP0.63□□□□□ -2.31
SNRPE-201ENST00000367208 F8W1H4 67 aa0.63□□□□□ -2.31
SNRPE-201ENST00000367208 G3V2T6 193 aa0.63□□□□□ -2.31
SNRPE-201ENST00000367208 H3BRM9 83 aa0.63□□□□□ -2.31
SNRPE-201ENST00000367208 M0R233 179 aa0.63□□□□□ -2.31
SNRPE-201ENST00000367208 ATP5HO75947 161 aa0.63□□□□□ -2.31
SNRPE-201ENST00000367208 ATG12O94817 140 aa0.63□□□□□ -2.31
SNRPE-201ENST00000367208 RAB5CP51148 216 aa0.63□□□□□ -2.31
SNRPE-201ENST00000367208 INSL3P51460 131 aa0.63□□□□□ -2.31
SNRPE-201ENST00000367208 TEN1Q86WV5 123 aa0.63□□□□□ -2.31
SNRPE-201ENST00000367208 RAB37Q96AX2 223 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms