RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 WRNQ14191 1432 aaPredicted RBP eCLIP-2.76□□□□□ -2.85
RNU4-40P-201ENST00000364351 CFAP46Q8IYW2 2715 aa-2.77□□□□□ -2.85
RNU4-40P-201ENST00000364351 MT1HL1P0DM35 61 aa-2.77□□□□□ -2.85
RNU4-40P-201ENST00000364351 COX5BP10606 129 aa-2.77□□□□□ -2.85
RNU4-40P-201ENST00000364351 SRP14P37108 136 aaKnown RBP-2.77□□□□□ -2.85
RNU4-40P-201ENST00000364351 C22orf39Q6P5X5 142 aa-2.77□□□□□ -2.85
RNU4-40P-201ENST00000364351 GRPEL2Q8TAA5 225 aa-2.77□□□□□ -2.85
RNU4-40P-201ENST00000364351 C2orf50Q96LR7 162 aa-2.77□□□□□ -2.85
RNU4-40P-201ENST00000364351 MYH9P35579 1960 aaKnown RBP-2.78□□□□□ -2.85
RNU4-40P-201ENST00000364351 SSC5DA1L4H1 1573 aa-2.78□□□□□ -2.85
RNU4-40P-201ENST00000364351 RREB1Q92766 1687 aa-2.78□□□□□ -2.85
RNU4-40P-201ENST00000364351 M0QZ92 97 aa-2.78□□□□□ -2.85
RNU4-40P-201ENST00000364351 ATP5G3P48201 142 aa-2.78□□□□□ -2.85
RNU4-40P-201ENST00000364351 SULT1A1P50225 295 aa-2.78□□□□□ -2.85
RNU4-40P-201ENST00000364351 AP3S2P59780 193 aa-2.78□□□□□ -2.85
RNU4-40P-201ENST00000364351 MYL5Q02045 173 aa-2.78□□□□□ -2.85
RNU4-40P-201ENST00000364351 NEDD8Q15843 81 aa-2.78□□□□□ -2.85
RNU4-40P-201ENST00000364351 TMEM86BQ8N661 226 aa-2.78□□□□□ -2.85
RNU4-40P-201ENST00000364351 ZHX1-C8orf76Q96EF9 292 aa-2.78□□□□□ -2.85
RNU4-40P-201ENST00000364351 NCOA1Q15788 1441 aa-2.78□□□□□ -2.85
RNU4-40P-201ENST00000364351 hDV103S1A0JD37 113 aa-2.79□□□□□ -2.86
RNU4-40P-201ENST00000364351 ZNF815PA8K554 130 aa-2.79□□□□□ -2.86
RNU4-40P-201ENST00000364351 HIGD1CA8MV81 97 aa-2.79□□□□□ -2.86
RNU4-40P-201ENST00000364351 YKT6O15498 198 aa-2.79□□□□□ -2.86
RNU4-40P-201ENST00000364351 KRTAP20-1Q3LI63 56 aa-2.79□□□□□ -2.86
RNU4-40P-201ENST00000364351 SSBP3-AS1Q7Z2R9 100 aa-2.79□□□□□ -2.86
RNU4-40P-201ENST00000364351 SMIM11BQ8TCY0 68 aa-2.79□□□□□ -2.86
RNU4-40P-201ENST00000364351 FGFR1OP2Q9NVK5 253 aa-2.79□□□□□ -2.86
RNU4-40P-201ENST00000364351 ROBO3Q96MS0 1386 aa-2.79□□□□□ -2.86
RNU4-40P-201ENST00000364351 BLMP54132 1417 aaPredicted RBP-2.79□□□□□ -2.86
RNU4-40P-201ENST00000364351 SACSQ9NZJ4 4579 aa-2.79□□□□□ -2.86
RNU4-40P-201ENST00000364351 KALRNO60229 2985 aa-2.8□□□□□ -2.86
RNU4-40P-201ENST00000364351 TRAV26-2A0A0B4J265 109 aa-2.8□□□□□ -2.86
RNU4-40P-201ENST00000364351 A0A0D9SFI3 127 aa-2.8□□□□□ -2.86
RNU4-40P-201ENST00000364351 OR4C46A6NHA9 309 aa-2.8□□□□□ -2.86
RNU4-40P-201ENST00000364351 TPM1P09493 284 aa-2.8□□□□□ -2.86
RNU4-40P-201ENST00000364351 CSAG1Q6PB30 78 aa-2.8□□□□□ -2.86
RNU4-40P-201ENST00000364351 AP1S3Q96PC3 154 aa-2.8□□□□□ -2.86
RNU4-40P-201ENST00000364351 MRPS26Q9BYN8 205 aaKnown RBP-2.8□□□□□ -2.86
RNU4-40P-201ENST00000364351 DRC3Q9H069 523 aa-2.8□□□□□ -2.86
RNU4-40P-201ENST00000364351 IMP3Q9NV31 184 aaKnown RBP-2.8□□□□□ -2.86
RNU4-40P-201ENST00000364351 TRPM7Q96QT4 1865 aa-2.8□□□□□ -2.86
RNU4-40P-201ENST00000364351 MYO5AQ9Y4I1 1855 aaKnown RBP-2.8□□□□□ -2.86
RNU4-40P-201ENST00000364351 PLCE1Q9P212 2302 aa-2.8□□□□□ -2.86
RNU4-40P-201ENST00000364351 VIRMAQ69YN4 1812 aaKnown RBP-2.81□□□□□ -2.86
RNU4-40P-201ENST00000364351 IQCF5A8MTL0 148 aa-2.81□□□□□ -2.86
RNU4-40P-201ENST00000364351 C9JAW5 83 aa-2.81□□□□□ -2.86
RNU4-40P-201ENST00000364351 J3QRK9 145 aa-2.81□□□□□ -2.86
RNU4-40P-201ENST00000364351 APODP05090 189 aa-2.81□□□□□ -2.86
RNU4-40P-201ENST00000364351 PSMB6P28072 239 aa-2.81□□□□□ -2.86
RNU4-40P-201ENST00000364351 RANP62826 216 aaKnown RBP-2.81□□□□□ -2.86
RNU4-40P-201ENST00000364351 H3F3AP84243 136 aa-2.81□□□□□ -2.86
RNU4-40P-201ENST00000364351 KRR1Q13601 381 aaKnown RBP-2.81□□□□□ -2.86
RNU4-40P-201ENST00000364351 DEFB112Q30KQ8 113 aa-2.81□□□□□ -2.86
RNU4-40P-201ENST00000364351 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-2.81□□□□□ -2.86
RNU4-40P-201ENST00000364351 CHCHD1Q96BP2 118 aaKnown RBP-2.81□□□□□ -2.86
RNU4-40P-201ENST00000364351 YPEL2Q96QA6 119 aa-2.81□□□□□ -2.86
RNU4-40P-201ENST00000364351 DUXBA0A1W2PPF3 345 aa-2.82□□□□□ -2.86
RNU4-40P-201ENST00000364351 FAM159BA6NKW6 160 aa-2.82□□□□□ -2.86
RNU4-40P-201ENST00000364351 UBE2G2P60604 165 aa-2.82□□□□□ -2.86
RNU4-40P-201ENST00000364351 DEFB135Q30KP9 77 aa-2.82□□□□□ -2.86
RNU4-40P-201ENST00000364351 HACD4Q5VWC8 232 aa-2.82□□□□□ -2.86
RNU4-40P-201ENST00000364351 STAG3L4Q8TBR4 150 aa-2.82□□□□□ -2.86
RNU4-40P-201ENST00000364351 ARL5BQ96KC2 179 aa-2.82□□□□□ -2.86
RNU4-40P-201ENST00000364351 CST11Q9H112 138 aa-2.82□□□□□ -2.86
RNU4-40P-201ENST00000364351 CDK12Q9NYV4 1490 aaPredicted RBP-2.83□□□□□ -2.86
RNU4-40P-201ENST00000364351 TRAV22A0A0B4J277 110 aa-2.83□□□□□ -2.86
RNU4-40P-201ENST00000364351 H0Y980 276 aa-2.83□□□□□ -2.86
RNU4-40P-201ENST00000364351 SMIM17P0DL12 118 aa-2.83□□□□□ -2.86
RNU4-40P-201ENST00000364351 OGFRL1Q5TC84 451 aaPredicted RBP-2.83□□□□□ -2.86
RNU4-40P-201ENST00000364351 GNPDA2Q8TDQ7 276 aa-2.83□□□□□ -2.86
RNU4-40P-201ENST00000364351 CSMD1Q96PZ7 3565 aa-2.84□□□□□ -2.86
RNU4-40P-201ENST00000364351 NUP98P52948 1817 aa-2.84□□□□□ -2.86
RNU4-40P-201ENST00000364351 FRYQ5TBA9 3013 aa-2.84□□□□□ -2.86
RNU4-40P-201ENST00000364351 DMXL1Q9Y485 3027 aa-2.84□□□□□ -2.86
RNU4-40P-201ENST00000364351 CPDO75976 1380 aa-2.84□□□□□ -2.86
RNU4-40P-201ENST00000364351 IGF2P01344 180 aa-2.84□□□□□ -2.86
RNU4-40P-201ENST00000364351 TCRBP04435 133 aa-2.84□□□□□ -2.86
RNU4-40P-201ENST00000364351 PHBP35232 272 aa-2.84□□□□□ -2.86
RNU4-40P-201ENST00000364351 SPCS3P61009 180 aa-2.84□□□□□ -2.86
RNU4-40P-201ENST00000364351 AESQ08117 197 aa-2.84□□□□□ -2.86
RNU4-40P-201ENST00000364351 UBE2DNLQ8IWF7 75 aa-2.84□□□□□ -2.86
RNU4-40P-201ENST00000364351 OR4K15Q8NH41 348 aa-2.84□□□□□ -2.86
RNU4-40P-201ENST00000364351 SLC25A40Q8TBP6 338 aa-2.84□□□□□ -2.86
RNU4-40P-201ENST00000364351 ZZEF1O43149 2961 aa-2.85□□□□□ -2.87
RNU4-40P-201ENST00000364351 DIAPH2-AS1Q14236 149 aa-2.85□□□□□ -2.87
RNU4-40P-201ENST00000364351 EIF5AL1Q6IS14 154 aaKnown RBP-2.85□□□□□ -2.87
RNU4-40P-201ENST00000364351 C12orf45Q8N5I9 185 aaPredicted RBP-2.85□□□□□ -2.87
RNU4-40P-201ENST00000364351 MRPL36Q9P0J6 103 aaKnown RBP-2.85□□□□□ -2.87
RNU4-40P-201ENST00000364351 HELZP42694 1942 aaKnown RBP-2.85□□□□□ -2.87
RNU4-40P-201ENST00000364351 TMED1Q13445 227 aa-2.86□□□□□ -2.87
RNU4-40P-201ENST00000364351 MED21Q13503 144 aa-2.86□□□□□ -2.87
RNU4-40P-201ENST00000364351 C1orf140Q5VVS0 124 aa-2.86□□□□□ -2.87
RNU4-40P-201ENST00000364351 NOSIPQ9Y314 301 aaKnown RBP-2.86□□□□□ -2.87
RNU4-40P-201ENST00000364351 REV3LO60673 3130 aa-2.86□□□□□ -2.87
RNU4-40P-201ENST00000364351 HLA-EP13747 358 aa-2.87□□□□□ -2.87
RNU4-40P-201ENST00000364351 MT1XP80297 61 aa-2.87□□□□□ -2.87
RNU4-40P-201ENST00000364351 NPCDR1Q9BY65 106 aa-2.87□□□□□ -2.87
RNU4-40P-201ENST00000364351 DLEC1Q9Y238 1755 aa-2.87□□□□□ -2.87
RNU4-40P-201ENST00000364351 TRAV17A0A0B4J275 112 aa-2.88□□□□□ -2.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms