RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 UBE2V1Q13404 147 aa6.66□□□□□ -1.34
RFX3-202ENST00000358730 C12orf54Q6X4T0 127 aa6.66□□□□□ -1.34
RFX3-202ENST00000358730 RNF182Q8N6D2 247 aa6.66□□□□□ -1.34
RFX3-202ENST00000358730 PRAC2D3DTV9 90 aa6.65□□□□□ -1.34
RFX3-202ENST00000358730 UBE2E1P51965 193 aa6.65□□□□□ -1.34
RFX3-202ENST00000358730 HIST1H1AQ02539 215 aaPredicted RBP6.65□□□□□ -1.34
RFX3-202ENST00000358730 NHLH1Q02575 133 aa6.65□□□□□ -1.34
RFX3-202ENST00000358730 ERASQ7Z444 233 aa6.65□□□□□ -1.34
RFX3-202ENST00000358730 IGHV3OR16-13A0A075B7E8 117 aa6.65□□□□□ -1.35
RFX3-202ENST00000358730 IGHV3-74A0A0B4J1X5 117 aa6.65□□□□□ -1.35
RFX3-202ENST00000358730 G3V318 75 aa6.65□□□□□ -1.35
RFX3-202ENST00000358730 BUB3O43684 328 aa6.65□□□□□ -1.35
RFX3-202ENST00000358730 GOSR1O95249 250 aa6.65□□□□□ -1.35
RFX3-202ENST00000358730 HBDP02042 147 aa6.65□□□□□ -1.35
RFX3-202ENST00000358730 COX8AP10176 69 aa6.65□□□□□ -1.35
RFX3-202ENST00000358730 CACNG7P62955 275 aa6.65□□□□□ -1.35
RFX3-202ENST00000358730 CLEC19AQ6UXS0 136 aa6.65□□□□□ -1.35
RFX3-202ENST00000358730 CCDC140Q96MF4 163 aa6.65□□□□□ -1.35
RFX3-202ENST00000358730 SNAI2O43623 268 aa6.64□□□□□ -1.35
RFX3-202ENST00000358730 RAB9AP51151 201 aa6.64□□□□□ -1.35
RFX3-202ENST00000358730 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.64□□□□□ -1.35
RFX3-202ENST00000358730 IL17RELQ6ZVW7 336 aa6.64□□□□□ -1.35
RFX3-202ENST00000358730 AJUBAQ96IF1 538 aa6.64□□□□□ -1.35
RFX3-202ENST00000358730 BPESC1Q9GZL8 116 aa6.64□□□□□ -1.35
RFX3-202ENST00000358730 MSRB1Q9NZV6 116 aa6.64□□□□□ -1.35
RFX3-202ENST00000358730 IGHV3-49A0A0A0MS15 119 aa6.64□□□□□ -1.35
RFX3-202ENST00000358730 FABP5P3A8MUU1 101 aa6.64□□□□□ -1.35
RFX3-202ENST00000358730 VAMP3Q15836 100 aa6.64□□□□□ -1.35
RFX3-202ENST00000358730 TAX1BP3O14907 124 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 ZNF207O43670 478 aaKnown RBP6.63□□□□□ -1.35
RFX3-202ENST00000358730 ANKRD39Q53RE8 183 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 PRSS57Q6UWY2 283 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 SLC50A1Q9BRV3 221 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 SPTBN4Q9H254 2564 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 CLPSL1A2RUU4 121 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 LINC01548A6NM66 108 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 PPIFP30405 207 aaKnown RBP6.63□□□□□ -1.35
RFX3-202ENST00000358730 EFNA4P52798 201 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 TCTAP57738 103 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 SRSF2Q01130 221 aaKnown RBP6.63□□□□□ -1.35
RFX3-202ENST00000358730 LGALS9BQ3B8N2 356 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 LGALS9CQ6DKI2 356 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 C2orf91Q6ZV80 131 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 ZNF575Q86XF7 245 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 DEFB125Q8N687 156 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 EEF1AKMT3Q96AZ1 226 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 MAP1LC3AQ9H492 121 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 PPP1R14DQ9NXH3 145 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 PAX8Q06710 450 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 LINC01559Q495D7 138 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 WFDC3Q8IUB2 231 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 OR4C5Q8NGB2 326 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 IFI27L1Q96BM0 104 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 RNF185Q96GF1 192 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 METTL26Q96S19 204 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 CNFNQ9BYD5 112 aa6.63□□□□□ -1.35
RFX3-202ENST00000358730 NCOR2Q9Y618 2525 aa6.62□□□□□ -1.35
RFX3-202ENST00000358730 CENPVL3A0A0U1RRI6 287 aa6.62□□□□□ -1.35
RFX3-202ENST00000358730 RBAKDNA6NC62 111 aa6.62□□□□□ -1.35
RFX3-202ENST00000358730 CBY3A6NI87 242 aa6.62□□□□□ -1.35
RFX3-202ENST00000358730 NPFFO15130 113 aa6.62□□□□□ -1.35
RFX3-202ENST00000358730 FOXE3Q13461 319 aa6.62□□□□□ -1.35
RFX3-202ENST00000358730 CHD8Q9HCK8 2581 aa6.62□□□□□ -1.35
RFX3-202ENST00000358730 GAS8-AS1O95177 125 aa6.62□□□□□ -1.35
RFX3-202ENST00000358730 PPBPP02775 128 aa6.62□□□□□ -1.35
RFX3-202ENST00000358730 EVI2AP22794 236 aa6.62□□□□□ -1.35
RFX3-202ENST00000358730 LMO4P61968 165 aa6.62□□□□□ -1.35
RFX3-202ENST00000358730 TMEM219Q86XT9 240 aa6.62□□□□□ -1.35
RFX3-202ENST00000358730 C18orf15Q96N68 181 aa6.62□□□□□ -1.35
RFX3-202ENST00000358730 FGF6P10767 208 aa6.61□□□□□ -1.35
RFX3-202ENST00000358730 TMEM78Q5T7P6 136 aa6.61□□□□□ -1.35
RFX3-202ENST00000358730 C8orf86Q6ZUL3 223 aa6.61□□□□□ -1.35
RFX3-202ENST00000358730 C5orf56Q8N8D9 126 aa6.61□□□□□ -1.35
RFX3-202ENST00000358730 DPF1Q92782 380 aa6.61□□□□□ -1.35
RFX3-202ENST00000358730 PSMG3-AS1Q96PY0 264 aa6.61□□□□□ -1.35
RFX3-202ENST00000358730 TRBV7-1A0A0A6YYK4 115 aa6.61□□□□□ -1.35
RFX3-202ENST00000358730 IGKV3D-20A0A0C4DH25 116 aa6.61□□□□□ -1.35
RFX3-202ENST00000358730 LY6DQ14210 128 aa6.61□□□□□ -1.35
RFX3-202ENST00000358730 KLK9Q2XQG4 91 aa6.61□□□□□ -1.35
RFX3-202ENST00000358730 AGPAT4-IT1Q9H0P7 198 aa6.61□□□□□ -1.35
RFX3-202ENST00000358730 KLK9Q9UKQ9 250 aa6.61□□□□□ -1.35
RFX3-202ENST00000358730 IGHV3OR16-10A0A075B7F0 116 aa6.6□□□□□ -1.35
RFX3-202ENST00000358730 TRAV8-2A0A0B4J237 113 aa6.6□□□□□ -1.35
RFX3-202ENST00000358730 TNFRSF6BO95407 300 aa6.6□□□□□ -1.35
RFX3-202ENST00000358730 OR1N2Q8NGR9 330 aa6.6□□□□□ -1.35
RFX3-202ENST00000358730 ZFHX3Q15911 3703 aa6.6□□□□□ -1.35
RFX3-202ENST00000358730 ABCA2Q9BZC7 2435 aa6.6□□□□□ -1.35
RFX3-202ENST00000358730 CD5LO43866 347 aa6.6□□□□□ -1.35
RFX3-202ENST00000358730 LEPP41159 167 aa6.6□□□□□ -1.35
RFX3-202ENST00000358730 TMEM97Q5BJF2 176 aa6.6□□□□□ -1.35
RFX3-202ENST00000358730 C11orf21Q9P2W6 132 aa6.6□□□□□ -1.35
RFX3-202ENST00000358730 LINC00527Q9UJ94 153 aa6.6□□□□□ -1.35
RFX3-202ENST00000358730 CBY1Q9Y3M2 126 aa6.6□□□□□ -1.35
RFX3-202ENST00000358730 TRGV3P03979 118 aa6.6□□□□□ -1.35
RFX3-202ENST00000358730 GATA1P15976 413 aaPredicted RBP6.6□□□□□ -1.35
RFX3-202ENST00000358730 ATP5G2Q06055 141 aa6.6□□□□□ -1.35
RFX3-202ENST00000358730 RNASE8Q8TDE3 154 aaKnown RBP6.6□□□□□ -1.35
RFX3-202ENST00000358730 NXT2Q9NPJ8 142 aaKnown RBP6.6□□□□□ -1.35
RFX3-202ENST00000358730 DKK2Q9UBU2 259 aa6.6□□□□□ -1.35
RFX3-202ENST00000358730 SMAD7O15105 426 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms