RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 MDS2Q8NDY4 140 aa10.31□□□□□ -0.76
SMC4-202ENST00000357388 TINCRA0A1B0GVN0 87 aa10.3□□□□□ -0.76
SMC4-202ENST00000357388 CYYR1Q96J86 154 aa10.3□□□□□ -0.76
SMC4-202ENST00000357388 IGLL5B9A064 214 aa10.3□□□□□ -0.76
SMC4-202ENST00000357388 IGLC1P0CG04 106 aa10.3□□□□□ -0.76
SMC4-202ENST00000357388 AMTNQ6UX39 209 aa10.3□□□□□ -0.76
SMC4-202ENST00000357388 ZNF747Q9BV97 191 aa10.3□□□□□ -0.76
SMC4-202ENST00000357388 H3BRN7 92 aa10.3□□□□□ -0.76
SMC4-202ENST00000357388 CCL25O15444 150 aa10.3□□□□□ -0.76
SMC4-202ENST00000357388 ZNF726P1Q15940 193 aa10.3□□□□□ -0.76
SMC4-202ENST00000357388 NDUFA4L2Q9NRX3 87 aa10.3□□□□□ -0.76
SMC4-202ENST00000357388 SAA4P35542 130 aa10.3□□□□□ -0.76
SMC4-202ENST00000357388 MP68P56378 58 aa10.3□□□□□ -0.76
SMC4-202ENST00000357388 DEFB131AP59861 70 aa10.3□□□□□ -0.76
SMC4-202ENST00000357388 IGFL4Q6B9Z1 124 aa10.3□□□□□ -0.76
SMC4-202ENST00000357388 ARFGEF1Q9Y6D6 1849 aa10.3□□□□□ -0.76
SMC4-202ENST00000357388 A0A1W2PPI3 338 aa10.3□□□□□ -0.76
SMC4-202ENST00000357388 J3QLI3 93 aa10.3□□□□□ -0.76
SMC4-202ENST00000357388 K7EM74 188 aa10.3□□□□□ -0.76
SMC4-202ENST00000357388 CGB3P0DN86 165 aa10.3□□□□□ -0.76
SMC4-202ENST00000357388 IL15RAQ13261 267 aa10.3□□□□□ -0.76
SMC4-202ENST00000357388 FOXI2Q6ZQN5 318 aa10.3□□□□□ -0.76
SMC4-202ENST00000357388 MDC1Q14676 2089 aaKnown RBP10.29□□□□□ -0.76
SMC4-202ENST00000357388 SPTBP11277 2137 aa10.29□□□□□ -0.76
SMC4-202ENST00000357388 IGHV1-69DA0A0B4J2H0 117 aa10.29□□□□□ -0.76
SMC4-202ENST00000357388 TEN1Q86WV5 123 aa10.29□□□□□ -0.76
SMC4-202ENST00000357388 ATP6V0E2Q8NHE4 81 aa10.29□□□□□ -0.76
SMC4-202ENST00000357388 OVOL3O00110 214 aa10.29□□□□□ -0.76
SMC4-202ENST00000357388 ZMAT4Q9H898 229 aa10.29□□□□□ -0.76
SMC4-202ENST00000357388 PKIGQ9Y2B9 76 aa10.29□□□□□ -0.76
SMC4-202ENST00000357388 TEX48A0A1B0GUV7 120 aa10.29□□□□□ -0.76
SMC4-202ENST00000357388 UBE2E1P51965 193 aa10.29□□□□□ -0.76
SMC4-202ENST00000357388 PAX9P55771 341 aa10.29□□□□□ -0.76
SMC4-202ENST00000357388 UBR3Q6ZT12 1888 aa10.29□□□□□ -0.76
SMC4-202ENST00000357388 PSMB8P28062 276 aa10.29□□□□□ -0.76
SMC4-202ENST00000357388 IGFBPL1Q8WX77 278 aa10.29□□□□□ -0.76
SMC4-202ENST00000357388 DKK1O94907 266 aa10.28□□□□□ -0.76
SMC4-202ENST00000357388 CGB7P0DN87 165 aa10.28□□□□□ -0.76
SMC4-202ENST00000357388 VWC2Q2TAL6 325 aa10.28□□□□□ -0.76
SMC4-202ENST00000357388 IGKV1D-17A0A075B6S4 117 aa10.28□□□□□ -0.76
SMC4-202ENST00000357388 A0A1B0GX51 115 aa10.28□□□□□ -0.76
SMC4-202ENST00000357388 FUSP35637 526 aaKnown RBP eCLIP10.28□□□□□ -0.76
SMC4-202ENST00000357388 COL24A1Q17RW2 1714 aa10.28□□□□□ -0.76
SMC4-202ENST00000357388 EFNA2O43921 213 aa10.27□□□□□ -0.76
SMC4-202ENST00000357388 C8orf86Q6ZUL3 223 aa10.27□□□□□ -0.76
SMC4-202ENST00000357388 GVINP1Q7Z2Y8 2422 aa10.27□□□□□ -0.77
SMC4-202ENST00000357388 CHKB-CPT1BH3BT56 60 aa10.27□□□□□ -0.77
SMC4-202ENST00000357388 C17orf82Q86X59 251 aaPredicted RBP10.27□□□□□ -0.77
SMC4-202ENST00000357388 CFHR4Q92496 578 aa10.27□□□□□ -0.77
SMC4-202ENST00000357388 PRB4P10163 310 aaPredicted RBP10.27□□□□□ -0.77
SMC4-202ENST00000357388 HIGD1BQ9P298 99 aa10.27□□□□□ -0.77
SMC4-202ENST00000357388 DKK2Q9UBU2 259 aa10.27□□□□□ -0.77
SMC4-202ENST00000357388 ZNF236Q9UL36 1845 aa10.26□□□□□ -0.77
SMC4-202ENST00000357388 K7ENP7 123 aa10.26□□□□□ -0.77
SMC4-202ENST00000357388 LTAP01374 205 aa10.26□□□□□ -0.77
SMC4-202ENST00000357388 COL8A2P25067 703 aa10.26□□□□□ -0.77
SMC4-202ENST00000357388 SIPA1L3O60292 1781 aaPredicted RBP10.26□□□□□ -0.77
SMC4-202ENST00000357388 LHBP01229 141 aa10.26□□□□□ -0.77
SMC4-202ENST00000357388 LMO1P25800 156 aa10.26□□□□□ -0.77
SMC4-202ENST00000357388 WFDC9Q8NEX5 89 aa10.26□□□□□ -0.77
SMC4-202ENST00000357388 LYPD6BQ8NI32 183 aa10.26□□□□□ -0.77
SMC4-202ENST00000357388 GATA4P43694 442 aa10.26□□□□□ -0.77
SMC4-202ENST00000357388 Q96MF0 132 aa10.26□□□□□ -0.77
SMC4-202ENST00000357388 IGHV1-69P01742 117 aa10.26□□□□□ -0.77
SMC4-202ENST00000357388 ANXA2RQ3ZCQ2 193 aa10.26□□□□□ -0.77
SMC4-202ENST00000357388 ABCA4P78363 2273 aa10.25□□□□□ -0.77
SMC4-202ENST00000357388 FAM236AA0A1B0GUQ0 79 aa10.25□□□□□ -0.77
SMC4-202ENST00000357388 FAM236BA0A1B0GV22 79 aa10.25□□□□□ -0.77
SMC4-202ENST00000357388 MLANAQ16655 118 aa10.25□□□□□ -0.77
SMC4-202ENST00000357388 ZNF833PQ6ZTB9 187 aa10.25□□□□□ -0.77
SMC4-202ENST00000357388 Q71RC1 249 aaPredicted RBP10.25□□□□□ -0.77
SMC4-202ENST00000357388 NDUFA4O00483 81 aa10.25□□□□□ -0.77
SMC4-202ENST00000357388 SLC25A29Q8N8R3 303 aa10.25□□□□□ -0.77
SMC4-202ENST00000357388 NXPH4O95158 308 aa10.25□□□□□ -0.77
SMC4-202ENST00000357388 CRYGCP07315 174 aa10.25□□□□□ -0.77
SMC4-202ENST00000357388 CR1LQ2VPA4 569 aa10.25□□□□□ -0.77
SMC4-202ENST00000357388 MRPL53Q96EL3 112 aaKnown RBP10.25□□□□□ -0.77
SMC4-202ENST00000357388 ATAD5Q96QE3 1844 aa10.24□□□□□ -0.77
SMC4-202ENST00000357388 PRSS29PA6NIE9 313 aa10.24□□□□□ -0.77
SMC4-202ENST00000357388 ZNF134P52741 427 aa10.24□□□□□ -0.77
SMC4-202ENST00000357388 ZNRF2Q8NHG8 242 aa10.24□□□□□ -0.77
SMC4-202ENST00000357388 SLX1AQ9BQ83 275 aa10.24□□□□□ -0.77
SMC4-202ENST00000357388 ZC2HC1AQ96GY0 325 aa10.24□□□□□ -0.77
SMC4-202ENST00000357388 POLR2AP24928 1970 aaKnown RBP10.24□□□□□ -0.77
SMC4-202ENST00000357388 TRAV26-2A0A0B4J265 109 aa10.24□□□□□ -0.77
SMC4-202ENST00000357388 IGKV1-16P04430 117 aa10.24□□□□□ -0.77
SMC4-202ENST00000357388 XCL2Q9UBD3 114 aa10.24□□□□□ -0.77
SMC4-202ENST00000357388 CEP250Q9BV73 2442 aa10.24□□□□□ -0.77
SMC4-202ENST00000357388 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.23□□□□□ -0.77
SMC4-202ENST00000357388 COL4A5P29400 1685 aa10.23□□□□□ -0.77
SMC4-202ENST00000357388 E7EQL1 145 aa10.23□□□□□ -0.77
SMC4-202ENST00000357388 LENEPQ9Y5L5 61 aa10.23□□□□□ -0.77
SMC4-202ENST00000357388 ADAMTSL1Q8N6G6 1762 aa10.23□□□□□ -0.77
SMC4-202ENST00000357388 RBAKDNA6NC62 111 aa10.23□□□□□ -0.77
SMC4-202ENST00000357388 ICOSQ9Y6W8 199 aa10.23□□□□□ -0.77
SMC4-202ENST00000357388 SCN10AQ9Y5Y9 1956 aa10.23□□□□□ -0.77
SMC4-202ENST00000357388 IGKV1-6A0A0C4DH72 117 aa10.23□□□□□ -0.77
SMC4-202ENST00000357388 JMJD7-PLA2G4BH0Y9G9 81 aa10.23□□□□□ -0.77
SMC4-202ENST00000357388 NDUFS5O43920 106 aa10.23□□□□□ -0.77
SMC4-202ENST00000357388 LINC01620Q4KN68 170 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms