RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 IGLL1P15814 213 aa16.76■□□□□ 0.27
LIMS2-202ENST00000355119 AMN1Q8IY45 258 aa16.76■□□□□ 0.27
LIMS2-202ENST00000355119 PRELID3AQ96N28 172 aa16.76■□□□□ 0.27
LIMS2-202ENST00000355119 HIF1ANQ9NWT6 349 aa16.76■□□□□ 0.27
LIMS2-202ENST00000355119 TRAV8-2A0A0B4J237 113 aa16.75■□□□□ 0.27
LIMS2-202ENST00000355119 ZNF207O43670 478 aaKnown RBP16.75■□□□□ 0.27
LIMS2-202ENST00000355119 ATP5J2P56134 94 aa16.75■□□□□ 0.27
LIMS2-202ENST00000355119 BATFQ16520 125 aa16.75■□□□□ 0.27
LIMS2-202ENST00000355119 LINC01559Q495D7 138 aa16.75■□□□□ 0.27
LIMS2-202ENST00000355119 MRPL51Q4U2R6 128 aaKnown RBP16.75■□□□□ 0.27
LIMS2-202ENST00000355119 OR10AG1Q8NH19 301 aa16.75■□□□□ 0.27
LIMS2-202ENST00000355119 TWIST1Q15672 202 aa16.75■□□□□ 0.27
LIMS2-202ENST00000355119 MRPS16Q9Y3D3 137 aaKnown RBP16.75■□□□□ 0.27
LIMS2-202ENST00000355119 IGHV3OR16-13A0A075B7E8 117 aa16.74■□□□□ 0.27
LIMS2-202ENST00000355119 IGHV3-74A0A0B4J1X5 117 aa16.74■□□□□ 0.27
LIMS2-202ENST00000355119 IGF1P05019 195 aa16.74■□□□□ 0.27
LIMS2-202ENST00000355119 COL5A1-AS1Q5SY13 56 aa16.74■□□□□ 0.27
LIMS2-202ENST00000355119 C8orf86Q6ZUL3 223 aa16.74■□□□□ 0.27
LIMS2-202ENST00000355119 ST20Q9HBF5 79 aa16.74■□□□□ 0.27
LIMS2-202ENST00000355119 IGHV3-49A0A0A0MS15 119 aa16.74■□□□□ 0.27
LIMS2-202ENST00000355119 H3BUA1 57 aa16.74■□□□□ 0.27
LIMS2-202ENST00000355119 BRI3O95415 125 aa16.74■□□□□ 0.27
LIMS2-202ENST00000355119 ARL3P36405 182 aa16.74■□□□□ 0.27
LIMS2-202ENST00000355119 HIST1H1AQ02539 215 aaPredicted RBP16.74■□□□□ 0.27
LIMS2-202ENST00000355119 LINC00527Q9UJ94 153 aa16.74■□□□□ 0.27
LIMS2-202ENST00000355119 IGHV4-38-2P0DP08 117 aa16.73■□□□□ 0.27
LIMS2-202ENST00000355119 TSPOP30536 169 aa16.73■□□□□ 0.27
LIMS2-202ENST00000355119 TMEM78Q5T7P6 136 aa16.73■□□□□ 0.27
LIMS2-202ENST00000355119 IL17RELQ6ZVW7 336 aa16.73■□□□□ 0.27
LIMS2-202ENST00000355119 ZNF575Q86XF7 245 aa16.73■□□□□ 0.27
LIMS2-202ENST00000355119 PSMG3-AS1Q96PY0 264 aa16.73■□□□□ 0.27
LIMS2-202ENST00000355119 CNFNQ9BYD5 112 aa16.73■□□□□ 0.27
LIMS2-202ENST00000355119 AGPAT4-IT1Q9H0P7 198 aa16.73■□□□□ 0.27
LIMS2-202ENST00000355119 LAMTOR2Q9Y2Q5 125 aa16.73■□□□□ 0.27
LIMS2-202ENST00000355119 IGHV4-30-2A0A087WSY4 118 aa16.72■□□□□ 0.27
LIMS2-202ENST00000355119 MUC21A0A0G2JKD1 596 aa16.72■□□□□ 0.27
LIMS2-202ENST00000355119 MUC21A0A140T8X8 626 aa16.72■□□□□ 0.27
LIMS2-202ENST00000355119 A6NDX4 124 aa16.72■□□□□ 0.27
LIMS2-202ENST00000355119 IFI27P40305 119 aaPredicted RBP16.72■□□□□ 0.27
LIMS2-202ENST00000355119 MUC21Q5SSG8 566 aa16.72■□□□□ 0.27
LIMS2-202ENST00000355119 SIGLEC8Q9NYZ4 499 aa16.72■□□□□ 0.27
LIMS2-202ENST00000355119 MSMBP08118 114 aa16.71■□□□□ 0.27
LIMS2-202ENST00000355119 GLMPQ8WWB7 406 aa16.71■□□□□ 0.27
LIMS2-202ENST00000355119 USMG5Q96IX5 58 aa16.71■□□□□ 0.27
LIMS2-202ENST00000355119 ZNF747Q9BV97 191 aa16.71■□□□□ 0.27
LIMS2-202ENST00000355119 HSBP1L1C9JCN9 74 aa16.7■□□□□ 0.26
LIMS2-202ENST00000355119 IGHG2P01859 326 aa16.7■□□□□ 0.26
LIMS2-202ENST00000355119 CKS2P33552 79 aa16.7■□□□□ 0.26
LIMS2-202ENST00000355119 LY6EQ16553 131 aa16.7■□□□□ 0.26
LIMS2-202ENST00000355119 C9orf47Q6ZRZ4 202 aa16.7■□□□□ 0.26
LIMS2-202ENST00000355119 LOC389332A0A1B0GUA5 103 aa16.7■□□□□ 0.26
LIMS2-202ENST00000355119 H3BUX3 64 aa16.7■□□□□ 0.26
LIMS2-202ENST00000355119 NDUFA4O00483 81 aa16.7■□□□□ 0.26
LIMS2-202ENST00000355119 LINC01545Q5VT33 79 aa16.7■□□□□ 0.26
LIMS2-202ENST00000355119 PPP1R14DQ9NXH3 145 aa16.7■□□□□ 0.26
LIMS2-202ENST00000355119 C16orf92Q96LL3 132 aa16.69■□□□□ 0.26
LIMS2-202ENST00000355119 TIMM8BQ9Y5J9 83 aaPredicted RBP16.69■□□□□ 0.26
LIMS2-202ENST00000355119 C9orf139Q6ZV77 190 aa16.69■□□□□ 0.26
LIMS2-202ENST00000355119 MED13LQ71F56 2210 aa16.68■□□□□ 0.26
LIMS2-202ENST00000355119 PPBPP02775 128 aa16.68■□□□□ 0.26
LIMS2-202ENST00000355119 PPIFP30405 207 aaKnown RBP16.68■□□□□ 0.26
LIMS2-202ENST00000355119 hDV102S1A0JD36 115 aa16.67■□□□□ 0.26
LIMS2-202ENST00000355119 ZNF25P17030 456 aaPredicted RBP16.67■□□□□ 0.26
LIMS2-202ENST00000355119 SPOCK3Q9BQ16 436 aa16.67■□□□□ 0.26
LIMS2-202ENST00000355119 MS4A6AQ9H2W1 248 aa16.67■□□□□ 0.26
LIMS2-202ENST00000355119 FAM106AQ4KMX7 169 aa16.67■□□□□ 0.26
LIMS2-202ENST00000355119 NPYP01303 97 aa16.66■□□□□ 0.26
LIMS2-202ENST00000355119 G0S2P27469 103 aa16.66■□□□□ 0.26
LIMS2-202ENST00000355119 DSCR9P59020 149 aa16.66■□□□□ 0.26
LIMS2-202ENST00000355119 RNF185Q96GF1 192 aa16.66■□□□□ 0.26
LIMS2-202ENST00000355119 A0A096LNJ9 63 aa16.65■□□□□ 0.26
LIMS2-202ENST00000355119 IGKV3D-20A0A0C4DH25 116 aa16.65■□□□□ 0.26
LIMS2-202ENST00000355119 H0Y8G0 127 aa16.65■□□□□ 0.26
LIMS2-202ENST00000355119 LOXL1Q08397 574 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-202ENST00000355119 MSRB1Q9NZV6 116 aa16.65■□□□□ 0.26
LIMS2-202ENST00000355119 ABCA2Q9BZC7 2435 aa16.65■□□□□ 0.26
LIMS2-202ENST00000355119 SMKR1H3BMG3 65 aa16.65■□□□□ 0.26
LIMS2-202ENST00000355119 LENEPQ9Y5L5 61 aa16.65■□□□□ 0.26
LIMS2-202ENST00000355119 B4DSR2 109 aa16.64■□□□□ 0.25
LIMS2-202ENST00000355119 TRBV12-3P01733 135 aa16.64■□□□□ 0.25
LIMS2-202ENST00000355119 STPG4Q8N801 248 aa16.64■□□□□ 0.25
LIMS2-202ENST00000355119 NCOR2Q9Y618 2525 aa16.64■□□□□ 0.25
LIMS2-202ENST00000355119 TCF21O43680 179 aa16.63■□□□□ 0.25
LIMS2-202ENST00000355119 HBDP02042 147 aa16.63■□□□□ 0.25
LIMS2-202ENST00000355119 UNQ9165/PRO28630Q6UXU0 137 aa16.63■□□□□ 0.25
LIMS2-202ENST00000355119 MAP1LC3AQ9H492 121 aa16.63■□□□□ 0.25
LIMS2-202ENST00000355119 C11orf21Q9P2W6 132 aa16.63■□□□□ 0.25
LIMS2-202ENST00000355119 CHD8Q9HCK8 2581 aa16.63■□□□□ 0.25
LIMS2-202ENST00000355119 SMAD7O15105 426 aaKnown RBP16.63■□□□□ 0.25
LIMS2-202ENST00000355119 NCR2O95944 276 aa16.63■□□□□ 0.25
LIMS2-202ENST00000355119 PF4V1P10720 104 aa16.63■□□□□ 0.25
LIMS2-202ENST00000355119 ZNF738Q8NE65 137 aa16.63■□□□□ 0.25
LIMS2-202ENST00000355119 MCRIP2Q9BUT9 160 aaKnown RBP16.63■□□□□ 0.25
LIMS2-202ENST00000355119 ITPR1Q14643 2758 aa16.63■□□□□ 0.25
LIMS2-202ENST00000355119 GATA3P23771 443 aa16.62■□□□□ 0.25
LIMS2-202ENST00000355119 SLC25A34Q6PIV7 304 aa16.62■□□□□ 0.25
LIMS2-202ENST00000355119 TMEM208Q9BTX3 173 aa16.62■□□□□ 0.25
LIMS2-202ENST00000355119 A0A0G2JLM5 398 aa16.62■□□□□ 0.25
LIMS2-202ENST00000355119 OVOL1O14753 267 aa16.62■□□□□ 0.25
LIMS2-202ENST00000355119 TFPI2P48307 235 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms