RNA–Protein interactions for RNA: ENST00000354209.7

PRKAA1-202, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-202ENST00000354209 PRR25Q96S07 402 aa16.29■□□□□ 0.2
PRKAA1-202ENST00000354209 PEMTQ9UBM1 199 aa16.29■□□□□ 0.2
PRKAA1-202ENST00000354209 BAHCC1Q9P281 2608 aa16.29■□□□□ 0.2
PRKAA1-202ENST00000354209 GATCO43716 136 aaKnown RBP16.29■□□□□ 0.2
PRKAA1-202ENST00000354209 SAPCD1Q5SSQ6 148 aa16.29■□□□□ 0.2
PRKAA1-202ENST00000354209 Q8TAT8 98 aa16.29■□□□□ 0.2
PRKAA1-202ENST00000354209 C8orf49Q96NF6 230 aa16.29■□□□□ 0.2
PRKAA1-202ENST00000354209 M0QZ24 198 aa16.28■□□□□ 0.2
PRKAA1-202ENST00000354209 ERCC8Q13216 396 aa16.28■□□□□ 0.2
PRKAA1-202ENST00000354209 NPIPB6E9PJ23 425 aa16.27■□□□□ 0.2
PRKAA1-202ENST00000354209 ZNF738Q8NE65 137 aa16.27■□□□□ 0.2
PRKAA1-202ENST00000354209 MS4A6AQ9H2W1 248 aa16.27■□□□□ 0.2
PRKAA1-202ENST00000354209 TRAV9-1A0A075B6T8 112 aa16.27■□□□□ 0.19
PRKAA1-202ENST00000354209 CCL24O00175 119 aa16.27■□□□□ 0.19
PRKAA1-202ENST00000354209 C9orf47Q6ZRZ4 202 aa16.27■□□□□ 0.19
PRKAA1-202ENST00000354209 GPR61Q9BZJ8 451 aa16.27■□□□□ 0.19
PRKAA1-202ENST00000354209 SMIM27A0A1W2PRY6 76 aa16.26■□□□□ 0.19
PRKAA1-202ENST00000354209 CA1P00915 261 aaPredicted RBP16.26■□□□□ 0.19
PRKAA1-202ENST00000354209 TYMSP04818 313 aa16.26■□□□□ 0.19
PRKAA1-202ENST00000354209 RPS10P46783 165 aaKnown RBP16.26■□□□□ 0.19
PRKAA1-202ENST00000354209 AGPAT4-IT1Q9H0P7 198 aa16.26■□□□□ 0.19
PRKAA1-202ENST00000354209 CYSRT1A8MQ03 144 aa16.25■□□□□ 0.19
PRKAA1-202ENST00000354209 ADARB2-AS1A8MUL3 147 aa16.25■□□□□ 0.19
PRKAA1-202ENST00000354209 P01737 135 aa16.25■□□□□ 0.19
PRKAA1-202ENST00000354209 CRIP1P50238 77 aa16.25■□□□□ 0.19
PRKAA1-202ENST00000354209 BTF3L4Q96K17 158 aa16.25■□□□□ 0.19
PRKAA1-202ENST00000354209 RPP21Q9H633 154 aaKnown RBP16.25■□□□□ 0.19
PRKAA1-202ENST00000354209 OVOL1O14753 267 aa16.25■□□□□ 0.19
PRKAA1-202ENST00000354209 CSN3P07498 182 aa16.25■□□□□ 0.19
PRKAA1-202ENST00000354209 CT83Q5H943 113 aa16.25■□□□□ 0.19
PRKAA1-202ENST00000354209 DAZAP1Q96EP5 407 aaKnown RBP16.25■□□□□ 0.19
PRKAA1-202ENST00000354209 PPP1R14DQ9NXH3 145 aa16.25■□□□□ 0.19
PRKAA1-202ENST00000354209 K7EQG2 157 aa16.24■□□□□ 0.19
PRKAA1-202ENST00000354209 CT45A10P0DMU9 189 aa16.24■□□□□ 0.19
PRKAA1-202ENST00000354209 ID1P41134 155 aa16.24■□□□□ 0.19
PRKAA1-202ENST00000354209 TMEM78Q5T7P6 136 aa16.24■□□□□ 0.19
PRKAA1-202ENST00000354209 OR4B1Q8NGF8 309 aa16.24■□□□□ 0.19
PRKAA1-202ENST00000354209 NDFIP1Q9BT67 221 aa16.24■□□□□ 0.19
PRKAA1-202ENST00000354209 SRD5A3Q9H8P0 318 aa16.24■□□□□ 0.19
PRKAA1-202ENST00000354209 SETXQ7Z333 2677 aaKnown RBP16.24■□□□□ 0.19
PRKAA1-202ENST00000354209 ZNF138P52744 262 aa16.23■□□□□ 0.19
PRKAA1-202ENST00000354209 KRTAP10-3P60369 221 aa16.23■□□□□ 0.19
PRKAA1-202ENST00000354209 WFDC3Q8IUB2 231 aa16.23■□□□□ 0.19
PRKAA1-202ENST00000354209 TSKUQ8WUA8 353 aa16.23■□□□□ 0.19
PRKAA1-202ENST00000354209 F8P00451 2351 aa16.22■□□□□ 0.19
PRKAA1-202ENST00000354209 A0A1B0GUS0 222 aa16.22■□□□□ 0.19
PRKAA1-202ENST00000354209 C1orf196B1AJZ1 125 aa16.22■□□□□ 0.19
PRKAA1-202ENST00000354209 TCL1AP56279 114 aa16.21■□□□□ 0.19
PRKAA1-202ENST00000354209 TFPI2P48307 235 aa16.21■□□□□ 0.19
PRKAA1-202ENST00000354209 SMUG1Q53HV7 270 aa16.21■□□□□ 0.19
PRKAA1-202ENST00000354209 OR10J6PQ8NGY7 276 aa16.21■□□□□ 0.19
PRKAA1-202ENST00000354209 ZNF705DP0CH99 300 aaPredicted RBP16.2■□□□□ 0.18
PRKAA1-202ENST00000354209 ZNF705BP0CI00 300 aaPredicted RBP16.2■□□□□ 0.18
PRKAA1-202ENST00000354209 ZNF80P51504 273 aaPredicted RBP16.2■□□□□ 0.18
PRKAA1-202ENST00000354209 DEFB1P60022 68 aa16.2■□□□□ 0.18
PRKAA1-202ENST00000354209 FAM162BQ5T6X4 162 aa16.2■□□□□ 0.18
PRKAA1-202ENST00000354209 OR8A1Q8NGG7 326 aa16.2■□□□□ 0.18
PRKAA1-202ENST00000354209 LINC00477Q96M19 166 aa16.2■□□□□ 0.18
PRKAA1-202ENST00000354209 LENEPQ9Y5L5 61 aa16.2■□□□□ 0.18
PRKAA1-202ENST00000354209 A8MWL6 223 aa16.19■□□□□ 0.18
PRKAA1-202ENST00000354209 SH2D1AO60880 128 aa16.19■□□□□ 0.18
PRKAA1-202ENST00000354209 RAB5BP61020 215 aa16.19■□□□□ 0.18
PRKAA1-202ENST00000354209 NEU1Q99519 415 aa16.19■□□□□ 0.18
PRKAA1-202ENST00000354209 F6UB75 175 aa16.19■□□□□ 0.18
PRKAA1-202ENST00000354209 TRGC2P03986 189 aa16.19■□□□□ 0.18
PRKAA1-202ENST00000354209 NDUFA11Q86Y39 141 aa16.19■□□□□ 0.18
PRKAA1-202ENST00000354209 OR2D3Q8NGH3 330 aa16.19■□□□□ 0.18
PRKAA1-202ENST00000354209 IZUMO1RA6ND01 250 aa16.18■□□□□ 0.18
PRKAA1-202ENST00000354209 ZNF688P0C7X2 276 aa16.18■□□□□ 0.18
PRKAA1-202ENST00000354209 SNRPD3P62318 126 aaKnown RBP16.18■□□□□ 0.18
PRKAA1-202ENST00000354209 PAFAH1B2P68402 229 aa16.18■□□□□ 0.18
PRKAA1-202ENST00000354209 ZFP82Q8N141 532 aa16.18■□□□□ 0.18
PRKAA1-202ENST00000354209 DYNLRB2Q8TF09 96 aa16.18■□□□□ 0.18
PRKAA1-202ENST00000354209 GFRA4Q9GZZ7 299 aa16.18■□□□□ 0.18
PRKAA1-202ENST00000354209 SIGLEC8Q9NYZ4 499 aa16.18■□□□□ 0.18
PRKAA1-202ENST00000354209 NAT8BQ9UHF3 227 aa16.18■□□□□ 0.18
PRKAA1-202ENST00000354209 TRAV2A0A0B4J234 112 aa16.17■□□□□ 0.18
PRKAA1-202ENST00000354209 PHOX2AO14813 284 aa16.17■□□□□ 0.18
PRKAA1-202ENST00000354209 HIST1H1AQ02539 215 aaPredicted RBP16.17■□□□□ 0.18
PRKAA1-202ENST00000354209 DEFB114Q30KQ6 69 aa16.17■□□□□ 0.18
PRKAA1-202ENST00000354209 NSUN5P1Q3KNT7 163 aa16.17■□□□□ 0.18
PRKAA1-202ENST00000354209 TMEM61Q8N0U2 210 aa16.17■□□□□ 0.18
PRKAA1-202ENST00000354209 NUP35Q8NFH5 326 aa16.17■□□□□ 0.18
PRKAA1-202ENST00000354209 FAM231BA6NCW3 169 aa16.17■□□□□ 0.18
PRKAA1-202ENST00000354209 HIGD1CA8MV81 97 aa16.17■□□□□ 0.18
PRKAA1-202ENST00000354209 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.17■□□□□ 0.18
PRKAA1-202ENST00000354209 GTSF1Q8WW33 167 aa16.17■□□□□ 0.18
PRKAA1-202ENST00000354209 C2CD3Q4AC94 2353 aa16.16■□□□□ 0.18
PRKAA1-202ENST00000354209 RPL19P84098 196 aaKnown RBP16.16■□□□□ 0.18
PRKAA1-202ENST00000354209 PSMG4Q5JS54 123 aa16.16■□□□□ 0.18
PRKAA1-202ENST00000354209 FAM19A4Q96LR4 140 aa16.16■□□□□ 0.18
PRKAA1-202ENST00000354209 SETD2Q9BYW2 2564 aaPredicted RBP16.16■□□□□ 0.18
PRKAA1-202ENST00000354209 RBPMS2Q6ZRY4 209 aaKnown RBP16.15■□□□□ 0.18
PRKAA1-202ENST00000354209 TRBV7-9A0A0J9YWB2 115 aa16.14■□□□□ 0.17
PRKAA1-202ENST00000354209 FABP5P3A8MUU1 101 aa16.14■□□□□ 0.17
PRKAA1-202ENST00000354209 ACTL10Q5JWF8 245 aa16.14■□□□□ 0.17
PRKAA1-202ENST00000354209 SPINK4O60575 86 aa16.13■□□□□ 0.17
PRKAA1-202ENST00000354209 FRMD6-AS1P0C7T7 363 aa16.13■□□□□ 0.17
PRKAA1-202ENST00000354209 GZMBP10144 247 aa16.13■□□□□ 0.17
PRKAA1-202ENST00000354209 CD300EQ496F6 205 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 200 ms