RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 Q8NA96 180 aa14.65□□□□□ -0.06
SCARF1-202ENST00000348987 PIFOQ8TCI5 191 aa14.65□□□□□ -0.06
SCARF1-202ENST00000348987 TRBV19A0A075B6N1 114 aa14.64□□□□□ -0.07
SCARF1-202ENST00000348987 PRSS1P07477 247 aa14.64□□□□□ -0.07
SCARF1-202ENST00000348987 ENSAO43768 121 aaKnown RBP14.64□□□□□ -0.07
SCARF1-202ENST00000348987 VMA21Q3ZAQ7 101 aa14.64□□□□□ -0.07
SCARF1-202ENST00000348987 LOXP28300 417 aaPredicted RBP14.63□□□□□ -0.07
SCARF1-202ENST00000348987 SIGLEC15Q6ZMC9 328 aa14.63□□□□□ -0.07
SCARF1-202ENST00000348987 ZMAT4Q9H898 229 aa14.63□□□□□ -0.07
SCARF1-202ENST00000348987 LEPP41159 167 aa14.63□□□□□ -0.07
SCARF1-202ENST00000348987 GAGE13Q4V321 117 aa14.63□□□□□ -0.07
SCARF1-202ENST00000348987 TCTEX1D4Q5JR98 221 aa14.63□□□□□ -0.07
SCARF1-202ENST00000348987 NGBQ9NPG2 151 aa14.63□□□□□ -0.07
SCARF1-202ENST00000348987 NPIPB5A8MRT5 1133 aa14.62□□□□□ -0.07
SCARF1-202ENST00000348987 NDUFB3O43676 98 aa14.62□□□□□ -0.07
SCARF1-202ENST00000348987 GAS8-AS1O95177 125 aa14.62□□□□□ -0.07
SCARF1-202ENST00000348987 IGKCP01834 107 aa14.62□□□□□ -0.07
SCARF1-202ENST00000348987 CNTFRP26992 372 aa14.62□□□□□ -0.07
SCARF1-202ENST00000348987 TWIST1Q15672 202 aa14.62□□□□□ -0.07
SCARF1-202ENST00000348987 ZC2HC1BQ5TFG8 222 aa14.62□□□□□ -0.07
SCARF1-202ENST00000348987 TNFRSF13BO14836 293 aaPredicted RBP14.62□□□□□ -0.07
SCARF1-202ENST00000348987 RBP4P02753 201 aa14.62□□□□□ -0.07
SCARF1-202ENST00000348987 C12orf74Q32Q52 190 aa14.62□□□□□ -0.07
SCARF1-202ENST00000348987 MRAP2Q96G30 205 aa14.62□□□□□ -0.07
SCARF1-202ENST00000348987 GEMIN7Q9H840 131 aaKnown RBP14.62□□□□□ -0.07
SCARF1-202ENST00000348987 CHD8Q9HCK8 2581 aa14.61□□□□□ -0.07
SCARF1-202ENST00000348987 PRRG2O14669 202 aa14.61□□□□□ -0.07
SCARF1-202ENST00000348987 PVRIGQ6DKI7 326 aa14.61□□□□□ -0.07
SCARF1-202ENST00000348987 GFRALQ6UXV0 394 aa14.61□□□□□ -0.07
SCARF1-202ENST00000348987 C20orf78Q9BR46 151 aa14.61□□□□□ -0.07
SCARF1-202ENST00000348987 COL6A6A6NMZ7 2263 aa14.61□□□□□ -0.07
SCARF1-202ENST00000348987 SH2D1AO60880 128 aa14.61□□□□□ -0.07
SCARF1-202ENST00000348987 DLX6P56179 175 aa14.61□□□□□ -0.07
SCARF1-202ENST00000348987 MAPKAPK5-AS1Q8N8E1 139 aa14.61□□□□□ -0.07
SCARF1-202ENST00000348987 RNASE6Q93091 150 aaKnown RBP14.61□□□□□ -0.07
SCARF1-202ENST00000348987 FOXC2Q99958 501 aa14.61□□□□□ -0.07
SCARF1-202ENST00000348987 RPL27AP46776 148 aaKnown RBP14.6□□□□□ -0.07
SCARF1-202ENST00000348987 RASL11BQ9BPW5 248 aa14.6□□□□□ -0.07
SCARF1-202ENST00000348987 SCNM1Q9BWG6 230 aa14.6□□□□□ -0.07
SCARF1-202ENST00000348987 PPIFP30405 207 aaKnown RBP14.6□□□□□ -0.07
SCARF1-202ENST00000348987 PRO0461Q9UI25 63 aa14.6□□□□□ -0.07
SCARF1-202ENST00000348987 AGRNO00468 2067 aa14.59□□□□□ -0.07
SCARF1-202ENST00000348987 TMEM8BA6NDV4 472 aa14.59□□□□□ -0.07
SCARF1-202ENST00000348987 LYNX1G3V0Z9 82 aa14.59□□□□□ -0.07
SCARF1-202ENST00000348987 LYNX1P0DP58 116 aa14.59□□□□□ -0.07
SCARF1-202ENST00000348987 EVI2AP22794 236 aa14.59□□□□□ -0.07
SCARF1-202ENST00000348987 KLF17Q5JT82 389 aaPredicted RBP14.59□□□□□ -0.07
SCARF1-202ENST00000348987 TMEM160Q9NX00 188 aa14.59□□□□□ -0.07
SCARF1-202ENST00000348987 ANKHD1Q8IWZ3 2542 aaKnown RBP14.59□□□□□ -0.07
SCARF1-202ENST00000348987 NCOR2Q9Y618 2525 aa14.59□□□□□ -0.07
SCARF1-202ENST00000348987 FCER1GP30273 86 aa14.59□□□□□ -0.07
SCARF1-202ENST00000348987 MSRB1Q9NZV6 116 aa14.59□□□□□ -0.07
SCARF1-202ENST00000348987 A0A1B0GWB2 263 aa14.58□□□□□ -0.08
SCARF1-202ENST00000348987 SHISA9B4DS77 424 aa14.58□□□□□ -0.08
SCARF1-202ENST00000348987 IGHV1-8P0DP01 117 aa14.58□□□□□ -0.08
SCARF1-202ENST00000348987 TMEM155Q4W5P6 130 aa14.58□□□□□ -0.08
SCARF1-202ENST00000348987 ZNF502Q8TBZ5 544 aa14.58□□□□□ -0.08
SCARF1-202ENST00000348987 MAP1LC3AQ9H492 121 aa14.58□□□□□ -0.08
SCARF1-202ENST00000348987 TRAV40A0A0B4J280 105 aa14.58□□□□□ -0.08
SCARF1-202ENST00000348987 E7EQL1 145 aa14.58□□□□□ -0.08
SCARF1-202ENST00000348987 LCNL1Q6ZST4 164 aa14.58□□□□□ -0.08
SCARF1-202ENST00000348987 DPM2O94777 84 aa14.57□□□□□ -0.08
SCARF1-202ENST00000348987 LINC00311Q8N616 119 aa14.57□□□□□ -0.08
SCARF1-202ENST00000348987 EGR2P11161 476 aaPredicted RBP14.57□□□□□ -0.08
SCARF1-202ENST00000348987 SRSF1Q07955 248 aaKnown RBP eCLIP14.57□□□□□ -0.08
SCARF1-202ENST00000348987 PSMG4Q5JS54 123 aa14.57□□□□□ -0.08
SCARF1-202ENST00000348987 SHANK2-AS3Q9BTD1 123 aa14.57□□□□□ -0.08
SCARF1-202ENST00000348987 DYNLRB1Q9NP97 96 aa14.57□□□□□ -0.08
SCARF1-202ENST00000348987 VSTM5A8MXK1 200 aa14.56□□□□□ -0.08
SCARF1-202ENST00000348987 APOMO95445 188 aa14.56□□□□□ -0.08
SCARF1-202ENST00000348987 IGKV1-17P01599 117 aa14.56□□□□□ -0.08
SCARF1-202ENST00000348987 HIST1H4GQ99525 98 aa14.56□□□□□ -0.08
SCARF1-202ENST00000348987 MRPL16Q9NX20 251 aaKnown RBP14.56□□□□□ -0.08
SCARF1-202ENST00000348987 MC5RP33032 325 aa14.55□□□□□ -0.08
SCARF1-202ENST00000348987 RRN3P1Q2M238 152 aa14.55□□□□□ -0.08
SCARF1-202ENST00000348987 SYT8Q8NBV8 401 aa14.55□□□□□ -0.08
SCARF1-202ENST00000348987 TMEM158Q8WZ71 300 aa14.55□□□□□ -0.08
SCARF1-202ENST00000348987 RNF185Q96GF1 192 aa14.55□□□□□ -0.08
SCARF1-202ENST00000348987 LYPD1Q8N2G4 141 aa14.55□□□□□ -0.08
SCARF1-202ENST00000348987 H3BRN7 92 aa14.54□□□□□ -0.08
SCARF1-202ENST00000348987 GATA1P15976 413 aaPredicted RBP14.54□□□□□ -0.08
SCARF1-202ENST00000348987 TTC9CQ8N5M4 171 aa14.54□□□□□ -0.08
SCARF1-202ENST00000348987 MRPL35Q9NZE8 188 aaKnown RBP14.54□□□□□ -0.08
SCARF1-202ENST00000348987 ZNF48Q96MX3 618 aaPredicted RBP14.54□□□□□ -0.08
SCARF1-202ENST00000348987 COL12A1Q99715 3063 aa14.53□□□□□ -0.08
SCARF1-202ENST00000348987 IGKV2-40A0A087WW87 121 aaPredicted RBP14.53□□□□□ -0.08
SCARF1-202ENST00000348987 I3L2K1 104 aa14.53□□□□□ -0.08
SCARF1-202ENST00000348987 TNFRSF6BO95407 300 aa14.53□□□□□ -0.08
SCARF1-202ENST00000348987 IGKV2D-40P01614 121 aaPredicted RBP14.53□□□□□ -0.08
SCARF1-202ENST00000348987 FOXI1Q12951 378 aa14.53□□□□□ -0.08
SCARF1-202ENST00000348987 C8orf86Q6ZUL3 223 aa14.53□□□□□ -0.08
SCARF1-202ENST00000348987 IGFBPL1Q8WX77 278 aa14.53□□□□□ -0.08
SCARF1-202ENST00000348987 ARHGAP32A7KAX9 2087 aa14.53□□□□□ -0.08
SCARF1-202ENST00000348987 SPINK8P0C7L1 97 aa14.53□□□□□ -0.08
SCARF1-202ENST00000348987 C8orf31Q8N9H6 132 aa14.53□□□□□ -0.08
SCARF1-202ENST00000348987 CDIP1Q9H305 208 aa14.53□□□□□ -0.08
SCARF1-202ENST00000348987 HRNRQ86YZ3 2850 aaPredicted RBP14.52□□□□□ -0.08
SCARF1-202ENST00000348987 MED13LQ71F56 2210 aa14.52□□□□□ -0.08
SCARF1-202ENST00000348987 TEX22C9J3V5 150 aa14.52□□□□□ -0.08
SCARF1-202ENST00000348987 MRPS12O15235 138 aaKnown RBP14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms