RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 FN1P02751 2386 aaKnown RBP14.11□□□□□ -0.15
PTN-201ENST00000348225 A0A1W2PPQ1 181 aa14.11□□□□□ -0.15
PTN-201ENST00000348225 OVOL1O14753 267 aa14.11□□□□□ -0.15
PTN-201ENST00000348225 CT45A10P0DMU9 189 aa14.11□□□□□ -0.15
PTN-201ENST00000348225 HIST2H2BDQ6DRA6 164 aa14.11□□□□□ -0.15
PTN-201ENST00000348225 TRAV9-1A0A075B6T8 112 aa14.1□□□□□ -0.15
PTN-201ENST00000348225 TMEM78Q5T7P6 136 aa14.1□□□□□ -0.15
PTN-201ENST00000348225 ZC2HC1AQ96GY0 325 aa14.1□□□□□ -0.15
PTN-201ENST00000348225 C20orf173Q96LM9 149 aa14.1□□□□□ -0.15
PTN-201ENST00000348225 PRR25Q96S07 402 aa14.1□□□□□ -0.15
PTN-201ENST00000348225 PYGO2Q9BRQ0 406 aa14.1□□□□□ -0.15
PTN-201ENST00000348225 MS4A6AQ9H2W1 248 aa14.1□□□□□ -0.15
PTN-201ENST00000348225 C19orf71A6NCJ1 209 aa14.09□□□□□ -0.15
PTN-201ENST00000348225 P01737 135 aa14.09□□□□□ -0.15
PTN-201ENST00000348225 PAFAH1B2P68402 229 aa14.09□□□□□ -0.15
PTN-201ENST00000348225 SRSF2Q01130 221 aaKnown RBP14.09□□□□□ -0.15
PTN-201ENST00000348225 COX8CQ7Z4L0 72 aa14.09□□□□□ -0.15
PTN-201ENST00000348225 DCANP1Q8TF63 244 aa14.09□□□□□ -0.15
PTN-201ENST00000348225 SELENOKQ9Y6D0 94 aa14.09□□□□□ -0.15
PTN-201ENST00000348225 RPS10P46783 165 aaKnown RBP14.08□□□□□ -0.15
PTN-201ENST00000348225 FAM3BP58499 235 aaPredicted RBP14.08□□□□□ -0.15
PTN-201ENST00000348225 ERCC8Q13216 396 aa14.08□□□□□ -0.15
PTN-201ENST00000348225 C9orf47Q6ZRZ4 202 aa14.08□□□□□ -0.15
PTN-201ENST00000348225 OR10J6PQ8NGY7 276 aa14.08□□□□□ -0.15
PTN-201ENST00000348225 Q8TAT8 98 aa14.08□□□□□ -0.15
PTN-201ENST00000348225 RPP21Q9H633 154 aaKnown RBP14.08□□□□□ -0.15
PTN-201ENST00000348225 CT83Q5H943 113 aa14.08□□□□□ -0.16
PTN-201ENST00000348225 ADAMTSL5Q6ZMM2 481 aa14.08□□□□□ -0.16
PTN-201ENST00000348225 WFDC3Q8IUB2 231 aa14.08□□□□□ -0.16
PTN-201ENST00000348225 OR4B1Q8NGF8 309 aa14.08□□□□□ -0.16
PTN-201ENST00000348225 DYNLRB2Q8TF09 96 aa14.08□□□□□ -0.16
PTN-201ENST00000348225 CSN3P07498 182 aa14.07□□□□□ -0.16
PTN-201ENST00000348225 ZNF138P52744 262 aa14.07□□□□□ -0.16
PTN-201ENST00000348225 SNRPD3P62318 126 aaKnown RBP14.07□□□□□ -0.16
PTN-201ENST00000348225 RPL19P84098 196 aaKnown RBP14.07□□□□□ -0.16
PTN-201ENST00000348225 LINC00322Q6ZN03 302 aaPredicted RBP14.07□□□□□ -0.16
PTN-201ENST00000348225 C8orf49Q96NF6 230 aa14.07□□□□□ -0.16
PTN-201ENST00000348225 ASCL2Q99929 193 aa14.07□□□□□ -0.16
PTN-201ENST00000348225 SMIM27A0A1W2PRY6 76 aa14.06□□□□□ -0.16
PTN-201ENST00000348225 TFPI2P48307 235 aa14.06□□□□□ -0.16
PTN-201ENST00000348225 SMUG1Q53HV7 270 aa14.06□□□□□ -0.16
PTN-201ENST00000348225 NDUFA11Q86Y39 141 aa14.06□□□□□ -0.16
PTN-201ENST00000348225 AGPAT4-IT1Q9H0P7 198 aa14.06□□□□□ -0.16
PTN-201ENST00000348225 PPP1R14DQ9NXH3 145 aa14.06□□□□□ -0.16
PTN-201ENST00000348225 C1orf196B1AJZ1 125 aa14.05□□□□□ -0.16
PTN-201ENST00000348225 NPIPB6E9PJ23 425 aa14.05□□□□□ -0.16
PTN-201ENST00000348225 K7EQG2 157 aa14.05□□□□□ -0.16
PTN-201ENST00000348225 TYMSP04818 313 aa14.05□□□□□ -0.16
PTN-201ENST00000348225 FAM162BQ5T6X4 162 aa14.05□□□□□ -0.16
PTN-201ENST00000348225 LINC00477Q96M19 166 aa14.05□□□□□ -0.16
PTN-201ENST00000348225 LENEPQ9Y5L5 61 aa14.05□□□□□ -0.16
PTN-201ENST00000348225 F8P00451 2351 aa14.05□□□□□ -0.16
PTN-201ENST00000348225 A8MWL6 223 aa14.04□□□□□ -0.16
PTN-201ENST00000348225 CA1P00915 261 aaPredicted RBP14.04□□□□□ -0.16
PTN-201ENST00000348225 NSUN5P1Q3KNT7 163 aa14.04□□□□□ -0.16
PTN-201ENST00000348225 RBPMS2Q6ZRY4 209 aaKnown RBP14.04□□□□□ -0.16
PTN-201ENST00000348225 TSKUQ8WUA8 353 aa14.04□□□□□ -0.16
PTN-201ENST00000348225 GPR61Q9BZJ8 451 aa14.04□□□□□ -0.16
PTN-201ENST00000348225 SRD5A3Q9H8P0 318 aa14.04□□□□□ -0.16
PTN-201ENST00000348225 TRAV2A0A0B4J234 112 aa14.04□□□□□ -0.16
PTN-201ENST00000348225 ADARB2-AS1A8MUL3 147 aa14.04□□□□□ -0.16
PTN-201ENST00000348225 RAB5BP61020 215 aa14.04□□□□□ -0.16
PTN-201ENST00000348225 OR8A1Q8NGG7 326 aa14.04□□□□□ -0.16
PTN-201ENST00000348225 TCL1AP56279 114 aa14.03□□□□□ -0.16
PTN-201ENST00000348225 OR2D3Q8NGH3 330 aa14.03□□□□□ -0.16
PTN-201ENST00000348225 SIGLEC8Q9NYZ4 499 aa14.03□□□□□ -0.16
PTN-201ENST00000348225 NAT8BQ9UHF3 227 aa14.03□□□□□ -0.16
PTN-201ENST00000348225 SH2D1AO60880 128 aa14.02□□□□□ -0.16
PTN-201ENST00000348225 ZNF688P0C7X2 276 aa14.02□□□□□ -0.16
PTN-201ENST00000348225 CRIP1P50238 77 aa14.02□□□□□ -0.16
PTN-201ENST00000348225 HIST1H1AQ02539 215 aaPredicted RBP14.02□□□□□ -0.16
PTN-201ENST00000348225 GFRA4Q9GZZ7 299 aa14.02□□□□□ -0.16
PTN-201ENST00000348225 IZUMO1RA6ND01 250 aa14.01□□□□□ -0.17
PTN-201ENST00000348225 KRTAP10-3P60369 221 aa14.01□□□□□ -0.17
PTN-201ENST00000348225 DEFB114Q30KQ6 69 aa14.01□□□□□ -0.17
PTN-201ENST00000348225 PSMG4Q5JS54 123 aa14.01□□□□□ -0.17
PTN-201ENST00000348225 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.01□□□□□ -0.17
PTN-201ENST00000348225 NEU1Q99519 415 aa14.01□□□□□ -0.17
PTN-201ENST00000348225 FAM231BA6NCW3 169 aa14.01□□□□□ -0.17
PTN-201ENST00000348225 ZNF705DP0CH99 300 aaPredicted RBP14.01□□□□□ -0.17
PTN-201ENST00000348225 ZNF705BP0CI00 300 aaPredicted RBP14.01□□□□□ -0.17
PTN-201ENST00000348225 TRAV25A0A0B4J276 109 aa14□□□□□ -0.17
PTN-201ENST00000348225 TRBV7-9A0A0J9YWB2 115 aa14□□□□□ -0.17
PTN-201ENST00000348225 XKRY2A2RUG3 117 aa14□□□□□ -0.17
PTN-201ENST00000348225 FABP5P3A8MUU1 101 aa14□□□□□ -0.17
PTN-201ENST00000348225 TMEM61Q8N0U2 210 aa14□□□□□ -0.17
PTN-201ENST00000348225 SETD2Q9BYW2 2564 aaPredicted RBP13.99□□□□□ -0.17
PTN-201ENST00000348225 HIGD1CA8MV81 97 aa13.99□□□□□ -0.17
PTN-201ENST00000348225 F6UB75 175 aa13.99□□□□□ -0.17
PTN-201ENST00000348225 ZNF80P51504 273 aaPredicted RBP13.99□□□□□ -0.17
PTN-201ENST00000348225 C2CD3Q4AC94 2353 aa13.99□□□□□ -0.17
PTN-201ENST00000348225 TMEM189A5PLL7 270 aa13.98□□□□□ -0.17
PTN-201ENST00000348225 DEFB1P60022 68 aa13.98□□□□□ -0.17
PTN-201ENST00000348225 RPS20P60866 119 aaKnown RBP13.98□□□□□ -0.17
PTN-201ENST00000348225 COX19Q49B96 90 aa13.98□□□□□ -0.17
PTN-201ENST00000348225 EBLN2Q6P2I7 272 aa13.98□□□□□ -0.17
PTN-201ENST00000348225 NUP35Q8NFH5 326 aa13.98□□□□□ -0.17
PTN-201ENST00000348225 SPAG8Q99932 426 aaPredicted RBP13.98□□□□□ -0.17
PTN-201ENST00000348225 OR4C46A6NHA9 309 aa13.97□□□□□ -0.17
PTN-201ENST00000348225 TRGC2P03986 189 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms