RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 ATP5L2Q7Z4Y8 100 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 BPIFA4PQ86YQ2 179 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 OR4B1Q8NGF8 309 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 BORCS7Q96B45 105 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 BPESC1Q9GZL8 116 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 OR4C46A6NHA9 309 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 CHEK1O14757 476 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 TRBV12-3P01733 135 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 LMO4P61968 165 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 LCNL1Q6ZST4 164 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 PIFOQ8TCI5 191 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 NDFIP1Q9BT67 221 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 ZFAND3Q9H8U3 227 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 LAMTOR2Q9Y2Q5 125 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 USP9YO00507 2555 aaPredicted RBP4.66□□□□□ -1.66
CLCN3-201ENST00000347613 CSPG4Q6UVK1 2322 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 TENM4Q6N022 2769 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 D6R8Y8 96 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 CCL25O15444 150 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 GPR183P32249 361 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 ECSCRQ19T08 205 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 CT83Q5H943 113 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 GFRA4Q9GZZ7 299 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 C21orf62Q9NYP8 219 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 TRAV9-2A0A087WT02 112 aa4.65□□□□□ -1.66
CLCN3-201ENST00000347613 TRAV8-2A0A0B4J237 113 aa4.65□□□□□ -1.66
CLCN3-201ENST00000347613 PF4P02776 101 aa4.65□□□□□ -1.66
CLCN3-201ENST00000347613 SAA4P35542 130 aa4.65□□□□□ -1.66
CLCN3-201ENST00000347613 EBI3Q14213 229 aa4.65□□□□□ -1.66
CLCN3-201ENST00000347613 C15orf32Q32M92 178 aa4.65□□□□□ -1.66
CLCN3-201ENST00000347613 C22orf15Q8WYQ4 148 aa4.65□□□□□ -1.66
CLCN3-201ENST00000347613 DAZAP1Q96EP5 407 aaKnown RBP4.65□□□□□ -1.66
CLCN3-201ENST00000347613 SMIM12Q96EX1 92 aa4.65□□□□□ -1.66
CLCN3-201ENST00000347613 PRR25Q96S07 402 aa4.65□□□□□ -1.66
CLCN3-201ENST00000347613 RNF5Q99942 180 aa4.65□□□□□ -1.66
CLCN3-201ENST00000347613 RAB1BQ9H0U4 201 aa4.65□□□□□ -1.66
CLCN3-201ENST00000347613 UBTD1Q9HAC8 227 aa4.65□□□□□ -1.66
CLCN3-201ENST00000347613 KIR3DS1Q14943 382 aa4.65□□□□□ -1.67
CLCN3-201ENST00000347613 BRD3OSQ6XYD6 125 aa4.65□□□□□ -1.67
CLCN3-201ENST00000347613 DTX2Q86UW9 622 aa4.65□□□□□ -1.67
CLCN3-201ENST00000347613 TMEM70Q9BUB7 260 aa4.65□□□□□ -1.67
CLCN3-201ENST00000347613 SIGLEC8Q9NYZ4 499 aa4.65□□□□□ -1.67
CLCN3-201ENST00000347613 A0A1B0GUT8 65 aa4.65□□□□□ -1.67
CLCN3-201ENST00000347613 M0R1W7 72 aa4.65□□□□□ -1.67
CLCN3-201ENST00000347613 KLRB1Q12918 225 aa4.65□□□□□ -1.67
CLCN3-201ENST00000347613 MPV17L2Q567V2 206 aa4.65□□□□□ -1.67
CLCN3-201ENST00000347613 PRR9Q5T870 116 aa4.65□□□□□ -1.67
CLCN3-201ENST00000347613 IL17RELQ6ZVW7 336 aa4.65□□□□□ -1.67
CLCN3-201ENST00000347613 NRGNQ92686 78 aa4.65□□□□□ -1.67
CLCN3-201ENST00000347613 RNF185Q96GF1 192 aa4.65□□□□□ -1.67
CLCN3-201ENST00000347613 UQCR10Q9UDW1 63 aa4.65□□□□□ -1.67
CLCN3-201ENST00000347613 CENPVL3A0A0U1RRI6 287 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 LEPROTL1O95214 131 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 NPYP01303 97 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 MFAP4P55083 255 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 COX19Q49B96 90 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 MRPL51Q4U2R6 128 aaKnown RBP4.64□□□□□ -1.67
CLCN3-201ENST00000347613 CLEC19AQ6UXS0 136 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 ZNF502Q8TBZ5 544 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 APCP25054 2843 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 CHD6Q8TD26 2715 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 A0A087X0K7 114 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.64□□□□□ -1.67
CLCN3-201ENST00000347613 IGKV3D-20A0A0C4DH25 116 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 TRBV6-1A0A0K0K1D8 114 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 BUB3O43684 328 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 TRGV3P03979 118 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 C20orf173Q96LM9 149 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 ZNF747Q9BV97 191 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 UBR5O95071 2799 aaPredicted RBP4.64□□□□□ -1.67
CLCN3-201ENST00000347613 HNRNPA3P51991 378 aaKnown RBP4.64□□□□□ -1.67
CLCN3-201ENST00000347613 UNQ9165/PRO28630Q6UXU0 137 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 C2orf91Q6ZV80 131 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 GPHB5Q86YW7 130 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 GATD1Q8NB37 220 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 TTTY13Q9BZ97 58 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 SCRT2Q9NQ03 307 aa4.64□□□□□ -1.67
CLCN3-201ENST00000347613 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.63□□□□□ -1.67
CLCN3-201ENST00000347613 ABCA12Q86UK0 2595 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 IGHV2-70DA0A0C4DH43 119 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 GNLYP22749 145 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 ATP5J2P56134 94 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 RHOGP84095 191 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 ZNF493Q6ZR52 646 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 ITLN2Q8WWU7 325 aaPredicted RBP4.63□□□□□ -1.67
CLCN3-201ENST00000347613 ZFP30Q9Y2G7 519 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 MUC4Q99102 2169 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 TRAV26-2A0A0B4J265 109 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 IGHV4-39P01824 125 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 IGLC6P0CF74 106 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 EVI2AP22794 236 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 CITED2Q99967 270 aaPredicted RBP4.63□□□□□ -1.67
CLCN3-201ENST00000347613 SRSF8Q9BRL6 282 aaKnown RBP4.63□□□□□ -1.67
CLCN3-201ENST00000347613 GOLT1BQ9Y3E0 138 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 U3KQK5 164 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 DOPEY2Q9Y3R5 2298 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 FAM231BA6NCW3 169 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 TCF21O43680 179 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 AVPP01185 164 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 1368.9 ms