RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 SMPXQ9UHP9 88 aa6.45□□□□□ -1.38
UBE4B-202ENST00000343090 A0A087WWL8 130 aa6.45□□□□□ -1.38
UBE4B-202ENST00000343090 G3V318 75 aa6.45□□□□□ -1.38
UBE4B-202ENST00000343090 C11orf53Q8IXP5 236 aa6.45□□□□□ -1.38
UBE4B-202ENST00000343090 SSC4DQ8WTU2 575 aa6.45□□□□□ -1.38
UBE4B-202ENST00000343090 TP73-AS1Q9UF72 201 aa6.45□□□□□ -1.38
UBE4B-202ENST00000343090 ABCA4P78363 2273 aa6.44□□□□□ -1.38
UBE4B-202ENST00000343090 IGLV3-9A0A075B6K5 115 aa6.44□□□□□ -1.38
UBE4B-202ENST00000343090 ATP6V0E1O15342 81 aa6.44□□□□□ -1.38
UBE4B-202ENST00000343090 Q8TCH9 128 aa6.44□□□□□ -1.38
UBE4B-202ENST00000343090 CLUHP3Q96NS8 147 aa6.44□□□□□ -1.38
UBE4B-202ENST00000343090 DTX1Q86Y01 620 aa6.44□□□□□ -1.38
UBE4B-202ENST00000343090 DUSP14O95147 198 aaKnown RBP6.44□□□□□ -1.38
UBE4B-202ENST00000343090 WT1P19544 449 aaPredicted RBP6.44□□□□□ -1.38
UBE4B-202ENST00000343090 CTRLP40313 264 aa6.44□□□□□ -1.38
UBE4B-202ENST00000343090 GOLGB1Q14789 3259 aaKnown RBP6.44□□□□□ -1.38
UBE4B-202ENST00000343090 TRBV7-1A0A0A6YYK4 115 aa6.44□□□□□ -1.38
UBE4B-202ENST00000343090 OOSP1A8MZH6 123 aa6.44□□□□□ -1.38
UBE4B-202ENST00000343090 GAGE5Q13069 117 aa6.44□□□□□ -1.38
UBE4B-202ENST00000343090 GAGE6Q13070 117 aa6.44□□□□□ -1.38
UBE4B-202ENST00000343090 LYPD1Q8N2G4 141 aa6.44□□□□□ -1.38
UBE4B-202ENST00000343090 NOTCH3Q9UM47 2321 aa6.44□□□□□ -1.38
UBE4B-202ENST00000343090 OVOL3O00110 214 aa6.43□□□□□ -1.38
UBE4B-202ENST00000343090 SLC25A20O43772 301 aa6.43□□□□□ -1.38
UBE4B-202ENST00000343090 ZNF876PQ49A33 203 aa6.43□□□□□ -1.38
UBE4B-202ENST00000343090 GTF3C1Q12789 2109 aa6.43□□□□□ -1.38
UBE4B-202ENST00000343090 PLA2G2CQ5R387 149 aa6.43□□□□□ -1.38
UBE4B-202ENST00000343090 C9orf139Q6ZV77 190 aa6.43□□□□□ -1.38
UBE4B-202ENST00000343090 IL17RELQ6ZVW7 336 aa6.43□□□□□ -1.38
UBE4B-202ENST00000343090 RHPN1-AS1Q9BWJ2 59 aa6.43□□□□□ -1.38
UBE4B-202ENST00000343090 TP53TG3Q9ULZ0 132 aa6.43□□□□□ -1.38
UBE4B-202ENST00000343090 TRBV19A0A075B6N1 114 aa6.43□□□□□ -1.38
UBE4B-202ENST00000343090 K7EM74 188 aa6.43□□□□□ -1.38
UBE4B-202ENST00000343090 MALP21145 153 aa6.43□□□□□ -1.38
UBE4B-202ENST00000343090 FAM231DQ6ZW35 169 aa6.43□□□□□ -1.38
UBE4B-202ENST00000343090 DTX2Q86UW9 622 aa6.43□□□□□ -1.38
UBE4B-202ENST00000343090 ODF3L1Q8IXM7 274 aa6.43□□□□□ -1.38
UBE4B-202ENST00000343090 MAPK1IP1LQ8NDC0 245 aa6.43□□□□□ -1.38
UBE4B-202ENST00000343090 GFRA4Q9GZZ7 299 aa6.43□□□□□ -1.38
UBE4B-202ENST00000343090 ANXA2RQ3ZCQ2 193 aa6.43□□□□□ -1.38
UBE4B-202ENST00000343090 ZNF562Q6V9R5 426 aa6.43□□□□□ -1.38
UBE4B-202ENST00000343090 SMIM20Q8N5G0 67 aa6.43□□□□□ -1.38
UBE4B-202ENST00000343090 WIPF2Q8TF74 440 aaPredicted RBP6.43□□□□□ -1.38
UBE4B-202ENST00000343090 TRBV7-9A0A0J9YWB2 115 aa6.42□□□□□ -1.38
UBE4B-202ENST00000343090 TNFRSF6BO95407 300 aa6.42□□□□□ -1.38
UBE4B-202ENST00000343090 LGALS9BQ3B8N2 356 aa6.42□□□□□ -1.38
UBE4B-202ENST00000343090 LGALS9CQ6DKI2 356 aa6.42□□□□□ -1.38
UBE4B-202ENST00000343090 RNF138Q8WVD3 245 aa6.42□□□□□ -1.38
UBE4B-202ENST00000343090 PPDPFLQ8WWR9 84 aa6.42□□□□□ -1.38
UBE4B-202ENST00000343090 KLF12Q9Y4X4 402 aa6.42□□□□□ -1.38
UBE4B-202ENST00000343090 TRGV11A0A075B6L2 103 aa6.42□□□□□ -1.38
UBE4B-202ENST00000343090 SIVA1O15304 175 aa6.42□□□□□ -1.38
UBE4B-202ENST00000343090 IGHV3-53P01767 116 aa6.42□□□□□ -1.38
UBE4B-202ENST00000343090 NSUN5P1Q3KNT7 163 aa6.42□□□□□ -1.38
UBE4B-202ENST00000343090 PCP2Q8IVA1 136 aa6.42□□□□□ -1.38
UBE4B-202ENST00000343090 ZFHX2Q9C0A1 2572 aaPredicted RBP6.42□□□□□ -1.38
UBE4B-202ENST00000343090 TEX36Q5VZQ5 186 aa6.42□□□□□ -1.38
UBE4B-202ENST00000343090 CEND1Q8N111 149 aa6.42□□□□□ -1.38
UBE4B-202ENST00000343090 TRAV26-2A0A0B4J265 109 aa6.42□□□□□ -1.38
UBE4B-202ENST00000343090 WFDC2Q14508 124 aa6.42□□□□□ -1.38
UBE4B-202ENST00000343090 TMEM75Q8N9X5 138 aa6.42□□□□□ -1.38
UBE4B-202ENST00000343090 FXYD5Q96DB9 178 aa6.42□□□□□ -1.38
UBE4B-202ENST00000343090 C17orf77Q96MU5 243 aa6.42□□□□□ -1.38
UBE4B-202ENST00000343090 CRPP02741 224 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 PIP4P2Q8N4L2 257 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 LINC00477Q96M19 166 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 ZNF492Q9P255 531 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 UBE2DNLQ8IWF7 75 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 BOD1L2Q8IYS8 172 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 ZNF747Q9BV97 191 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 RNF114Q9Y508 228 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 IGFL3Q6UXB1 125 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 C1QTNF4Q9BXJ3 329 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 C11orf68Q9H3H3 251 aaKnown RBP6.41□□□□□ -1.38
UBE4B-202ENST00000343090 CREBBPQ92793 2442 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 TRGV4A0A0C4DH28 118 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 IFITM1P13164 125 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 PRR20EP86478 221 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 PRR20CP86479 221 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 PRR20DP86480 221 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 PRR20BP86481 221 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 PRR20AP86496 221 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 MALRD1Q5VYJ5 2156 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 GAGE12JA6NER3 117 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 B4DSR2 109 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 K7ENP7 123 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 GAGE7O76087 117 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 GAGE12FP0CL80 117 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 GAGE12GP0CL81 117 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 GAGE12IP0CL82 117 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 SYNJ2BPP57105 145 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 GAGE4Q13068 117 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 KRTAP27-1Q3LI81 207 aa6.41□□□□□ -1.38
UBE4B-202ENST00000343090 C9JAW5 83 aa6.4□□□□□ -1.38
UBE4B-202ENST00000343090 PDE6HQ13956 83 aa6.4□□□□□ -1.38
UBE4B-202ENST00000343090 SPATA12Q7Z6I5 190 aa6.4□□□□□ -1.38
UBE4B-202ENST00000343090 UBE2E2Q96LR5 201 aa6.4□□□□□ -1.38
UBE4B-202ENST00000343090 CTSZQ9UBR2 303 aa6.4□□□□□ -1.38
UBE4B-202ENST00000343090 TRBV20-1A0A075B6N2 111 aa6.4□□□□□ -1.38
UBE4B-202ENST00000343090 GRNP28799 593 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms