RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 HIGD1BQ9P298 99 aa11.95□□□□□ -0.5
SNX18-202ENST00000343017 NCOR2Q9Y618 2525 aa11.95□□□□□ -0.5
SNX18-202ENST00000343017 J3QR89 54 aa11.94□□□□□ -0.5
SNX18-202ENST00000343017 IL4P05112 153 aa11.94□□□□□ -0.5
SNX18-202ENST00000343017 PRSS33Q8NF86 280 aa11.94□□□□□ -0.5
SNX18-202ENST00000343017 TMEM158Q8WZ71 300 aa11.94□□□□□ -0.5
SNX18-202ENST00000343017 SHANK2-AS3Q9BTD1 123 aa11.94□□□□□ -0.5
SNX18-202ENST00000343017 TM2D2Q9BX73 214 aa11.94□□□□□ -0.5
SNX18-202ENST00000343017 IGHG3P01860 377 aa11.94□□□□□ -0.5
SNX18-202ENST00000343017 A0A1B0GWB2 263 aa11.93□□□□□ -0.5
SNX18-202ENST00000343017 TEX22C9J3V5 150 aa11.93□□□□□ -0.5
SNX18-202ENST00000343017 ZMAT4Q9H898 229 aa11.93□□□□□ -0.5
SNX18-202ENST00000343017 MRPL35Q9NZE8 188 aaKnown RBP11.93□□□□□ -0.5
SNX18-202ENST00000343017 CCL17Q92583 94 aa11.93□□□□□ -0.5
SNX18-202ENST00000343017 RNF185Q96GF1 192 aa11.93□□□□□ -0.5
SNX18-202ENST00000343017 SIGLEC9Q9Y336 463 aa11.93□□□□□ -0.5
SNX18-202ENST00000343017 I3L2K1 104 aa11.93□□□□□ -0.5
SNX18-202ENST00000343017 HLA-DMBP28068 263 aa11.93□□□□□ -0.5
SNX18-202ENST00000343017 ZNF575Q86XF7 245 aa11.93□□□□□ -0.5
SNX18-202ENST00000343017 MAP1LC3AQ9H492 121 aa11.93□□□□□ -0.5
SNX18-202ENST00000343017 TRBV6-1A0A0K0K1D8 114 aa11.92□□□□□ -0.5
SNX18-202ENST00000343017 HIST1H4GQ99525 98 aa11.92□□□□□ -0.5
SNX18-202ENST00000343017 PVRIGQ6DKI7 326 aa11.92□□□□□ -0.5
SNX18-202ENST00000343017 GEMIN7Q9H840 131 aaKnown RBP11.92□□□□□ -0.5
SNX18-202ENST00000343017 PRO0461Q9UI25 63 aa11.92□□□□□ -0.5
SNX18-202ENST00000343017 IGHV3OR16-8A0A075B7F1 116 aa11.91□□□□□ -0.5
SNX18-202ENST00000343017 NDUFA3O95167 84 aa11.91□□□□□ -0.5
SNX18-202ENST00000343017 TNFRSF6BO95407 300 aa11.91□□□□□ -0.5
SNX18-202ENST00000343017 ORM1P02763 201 aa11.91□□□□□ -0.5
SNX18-202ENST00000343017 ZNF491Q8N8L2 437 aa11.91□□□□□ -0.5
SNX18-202ENST00000343017 H3BRN7 92 aa11.91□□□□□ -0.5
SNX18-202ENST00000343017 DPM2O94777 84 aa11.91□□□□□ -0.5
SNX18-202ENST00000343017 FAM27E3Q08E93 113 aa11.91□□□□□ -0.5
SNX18-202ENST00000343017 TEX36Q5VZQ5 186 aa11.91□□□□□ -0.5
SNX18-202ENST00000343017 CTSZQ9UBR2 303 aa11.91□□□□□ -0.5
SNX18-202ENST00000343017 COL6A6A6NMZ7 2263 aa11.9□□□□□ -0.5
SNX18-202ENST00000343017 TMEM30BQ3MIR4 351 aa11.9□□□□□ -0.5
SNX18-202ENST00000343017 PPP1R27Q86WC6 154 aa11.9□□□□□ -0.5
SNX18-202ENST00000343017 RNF125Q96EQ8 232 aa11.9□□□□□ -0.5
SNX18-202ENST00000343017 LINC01548A6NM66 108 aa11.9□□□□□ -0.5
SNX18-202ENST00000343017 MRPS12O15235 138 aaKnown RBP11.9□□□□□ -0.5
SNX18-202ENST00000343017 GATA3P23771 443 aa11.9□□□□□ -0.5
SNX18-202ENST00000343017 MC5RP33032 325 aa11.9□□□□□ -0.5
SNX18-202ENST00000343017 SYT8Q8NBV8 401 aa11.9□□□□□ -0.5
SNX18-202ENST00000343017 GLMPQ8WWB7 406 aa11.9□□□□□ -0.5
SNX18-202ENST00000343017 CACNA1BQ00975 2339 aa11.9□□□□□ -0.51
SNX18-202ENST00000343017 SH3BGRL2Q9UJC5 107 aa11.89□□□□□ -0.51
SNX18-202ENST00000343017 SVEP1Q4LDE5 3571 aa11.89□□□□□ -0.51
SNX18-202ENST00000343017 TRAV26-2A0A0B4J265 109 aa11.89□□□□□ -0.51
SNX18-202ENST00000343017 K7EM74 188 aa11.89□□□□□ -0.51
SNX18-202ENST00000343017 PLGLAQ15195 96 aa11.89□□□□□ -0.51
SNX18-202ENST00000343017 PTH2Q96A98 100 aa11.89□□□□□ -0.51
SNX18-202ENST00000343017 AAMDCQ9H7C9 122 aa11.89□□□□□ -0.51
SNX18-202ENST00000343017 K7EIM0 57 aa11.89□□□□□ -0.51
SNX18-202ENST00000343017 APOMO95445 188 aa11.89□□□□□ -0.51
SNX18-202ENST00000343017 MT-ATP8P03928 68 aa11.89□□□□□ -0.51
SNX18-202ENST00000343017 EFNA4P52798 201 aa11.89□□□□□ -0.51
SNX18-202ENST00000343017 RRN3P1Q2M238 152 aa11.89□□□□□ -0.51
SNX18-202ENST00000343017 PIFOQ8TCI5 191 aa11.89□□□□□ -0.51
SNX18-202ENST00000343017 PRR25Q96S07 402 aa11.89□□□□□ -0.51
SNX18-202ENST00000343017 IGHV3-23P01764 117 aa11.88□□□□□ -0.51
SNX18-202ENST00000343017 CRYGBP07316 175 aa11.88□□□□□ -0.51
SNX18-202ENST00000343017 RELNP78509 3460 aa11.88□□□□□ -0.51
SNX18-202ENST00000343017 PTPRQQ9UMZ3 2332 aa11.88□□□□□ -0.51
SNX18-202ENST00000343017 TRAV17A0A0B4J275 112 aa11.88□□□□□ -0.51
SNX18-202ENST00000343017 NDUFB3O43676 98 aa11.88□□□□□ -0.51
SNX18-202ENST00000343017 CNIH1O95406 144 aa11.88□□□□□ -0.51
SNX18-202ENST00000343017 FHL3Q13643 280 aa11.88□□□□□ -0.51
SNX18-202ENST00000343017 TTC9CQ8N5M4 171 aa11.88□□□□□ -0.51
SNX18-202ENST00000343017 MRAP2Q96G30 205 aa11.88□□□□□ -0.51
SNX18-202ENST00000343017 CYSLTR1Q9Y271 337 aa11.88□□□□□ -0.51
SNX18-202ENST00000343017 NFE4Q86UQ8 179 aa11.87□□□□□ -0.51
SNX18-202ENST00000343017 SPTAN1Q13813 2472 aaKnown RBP11.87□□□□□ -0.51
SNX18-202ENST00000343017 IGHV3-35A0A0C4DH35 117 aa11.87□□□□□ -0.51
SNX18-202ENST00000343017 LOXP28300 417 aaPredicted RBP11.87□□□□□ -0.51
SNX18-202ENST00000343017 SMCPP49901 116 aaPredicted RBP11.87□□□□□ -0.51
SNX18-202ENST00000343017 CDIP1Q9H305 208 aa11.87□□□□□ -0.51
SNX18-202ENST00000343017 TMEM238LA0A1B0GVL6 79 aa11.86□□□□□ -0.51
SNX18-202ENST00000343017 SPINK8P0C7L1 97 aa11.86□□□□□ -0.51
SNX18-202ENST00000343017 IGLC6P0CF74 106 aa11.86□□□□□ -0.51
SNX18-202ENST00000343017 IGHV1-8P0DP01 117 aa11.86□□□□□ -0.51
SNX18-202ENST00000343017 FOXC1Q12948 553 aa11.86□□□□□ -0.51
SNX18-202ENST00000343017 ERCC8Q13216 396 aa11.86□□□□□ -0.51
SNX18-202ENST00000343017 KLK15Q9H2R5 256 aa11.86□□□□□ -0.51
SNX18-202ENST00000343017 TRGV3P03979 118 aa11.86□□□□□ -0.51
SNX18-202ENST00000343017 COX7A1P24310 79 aa11.86□□□□□ -0.51
SNX18-202ENST00000343017 C8orf86Q6ZUL3 223 aa11.86□□□□□ -0.51
SNX18-202ENST00000343017 DTX2Q86UW9 622 aa11.86□□□□□ -0.51
SNX18-202ENST00000343017 LYPD1Q8N2G4 141 aa11.86□□□□□ -0.51
SNX18-202ENST00000343017 LINC00311Q8N616 119 aa11.86□□□□□ -0.51
SNX18-202ENST00000343017 FOXI1Q12951 378 aa11.85□□□□□ -0.51
SNX18-202ENST00000343017 MORN3Q6PF18 240 aaPredicted RBP11.85□□□□□ -0.51
SNX18-202ENST00000343017 ZNF502Q8TBZ5 544 aa11.85□□□□□ -0.51
SNX18-202ENST00000343017 ZNF418Q8TF45 676 aaPredicted RBP11.85□□□□□ -0.51
SNX18-202ENST00000343017 CD40P25942 277 aa11.85□□□□□ -0.51
SNX18-202ENST00000343017 DLX6P56179 175 aa11.85□□□□□ -0.51
SNX18-202ENST00000343017 TCTEX1D4Q5JR98 221 aa11.85□□□□□ -0.51
SNX18-202ENST00000343017 IGHV1-3A0A0C4DH29 117 aa11.84□□□□□ -0.51
SNX18-202ENST00000343017 ASCL5Q7RTU5 278 aa11.84□□□□□ -0.51
SNX18-202ENST00000343017 PGPEP1Q9NXJ5 209 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms