RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 LINC01619G3V211 115 aa12.68□□□□□ -0.38
CLCF1-201ENST00000312438 FOSL1P15407 271 aa12.68□□□□□ -0.38
CLCF1-201ENST00000312438 FABP9Q0Z7S8 132 aa12.68□□□□□ -0.38
CLCF1-201ENST00000312438 ERCC8Q13216 396 aa12.68□□□□□ -0.38
CLCF1-201ENST00000312438 SAMD13Q5VXD3 122 aa12.68□□□□□ -0.38
CLCF1-201ENST00000312438 OR11H1Q8NG94 326 aa12.68□□□□□ -0.38
CLCF1-201ENST00000312438 DPF1Q92782 380 aa12.68□□□□□ -0.38
CLCF1-201ENST00000312438 NEU1Q99519 415 aa12.68□□□□□ -0.38
CLCF1-201ENST00000312438 GFRA4Q9GZZ7 299 aa12.68□□□□□ -0.38
CLCF1-201ENST00000312438 SAV1Q9H4B6 383 aaPredicted RBP12.68□□□□□ -0.38
CLCF1-201ENST00000312438 EDN2P20800 178 aa12.67□□□□□ -0.38
CLCF1-201ENST00000312438 KHDC1LQ5JSQ8 128 aa12.67□□□□□ -0.38
CLCF1-201ENST00000312438 NUP35Q8NFH5 326 aa12.67□□□□□ -0.38
CLCF1-201ENST00000312438 OR2D3Q8NGH3 330 aa12.67□□□□□ -0.38
CLCF1-201ENST00000312438 OR1N2Q8NGR9 330 aa12.67□□□□□ -0.38
CLCF1-201ENST00000312438 LINC01006Q8NI28 216 aa12.67□□□□□ -0.38
CLCF1-201ENST00000312438 AGPAT4-IT1Q9H0P7 198 aa12.67□□□□□ -0.38
CLCF1-201ENST00000312438 PPP1R14DQ9NXH3 145 aa12.67□□□□□ -0.38
CLCF1-201ENST00000312438 ACANP16112 2415 aa12.67□□□□□ -0.38
CLCF1-201ENST00000312438 HIGD1CA8MV81 97 aa12.67□□□□□ -0.38
CLCF1-201ENST00000312438 SPINK4O60575 86 aa12.67□□□□□ -0.38
CLCF1-201ENST00000312438 CBLN1P23435 193 aa12.67□□□□□ -0.38
CLCF1-201ENST00000312438 TMEM78Q5T7P6 136 aa12.67□□□□□ -0.38
CLCF1-201ENST00000312438 C9orf47Q6ZRZ4 202 aa12.67□□□□□ -0.38
CLCF1-201ENST00000312438 ZNF738Q8NE65 137 aa12.67□□□□□ -0.38
CLCF1-201ENST00000312438 Q8TAT8 98 aa12.67□□□□□ -0.38
CLCF1-201ENST00000312438 C20orf173Q96LM9 149 aa12.67□□□□□ -0.38
CLCF1-201ENST00000312438 GNB1LQ9BYB4 327 aa12.67□□□□□ -0.38
CLCF1-201ENST00000312438 IGKV3-7A0A075B6H7 116 aa12.66□□□□□ -0.38
CLCF1-201ENST00000312438 OVOL1O14753 267 aa12.66□□□□□ -0.38
CLCF1-201ENST00000312438 NDUFA6P56556 154 aa12.66□□□□□ -0.38
CLCF1-201ENST00000312438 SMUG1Q53HV7 270 aa12.66□□□□□ -0.38
CLCF1-201ENST00000312438 FAM162BQ5T6X4 162 aa12.66□□□□□ -0.38
CLCF1-201ENST00000312438 WDR73Q6P4I2 378 aa12.66□□□□□ -0.38
CLCF1-201ENST00000312438 C2orf70A6NJV1 201 aa12.65□□□□□ -0.38
CLCF1-201ENST00000312438 ID1P41134 155 aa12.65□□□□□ -0.38
CLCF1-201ENST00000312438 ZNF138P52744 262 aa12.65□□□□□ -0.38
CLCF1-201ENST00000312438 DEFB136Q30KP8 78 aa12.65□□□□□ -0.38
CLCF1-201ENST00000312438 RASL11AQ6T310 242 aa12.65□□□□□ -0.38
CLCF1-201ENST00000312438 KLHL30-AS1Q8NEE0 82 aa12.65□□□□□ -0.38
CLCF1-201ENST00000312438 M0QZ24 198 aa12.65□□□□□ -0.39
CLCF1-201ENST00000312438 SLURP1P55000 103 aa12.65□□□□□ -0.39
CLCF1-201ENST00000312438 FOXA3P55318 350 aaPredicted RBP12.65□□□□□ -0.39
CLCF1-201ENST00000312438 GPR61Q9BZJ8 451 aa12.65□□□□□ -0.39
CLCF1-201ENST00000312438 MT-ND6P03923 174 aa12.64□□□□□ -0.39
CLCF1-201ENST00000312438 FRMD6-AS1P0C7T7 363 aa12.64□□□□□ -0.39
CLCF1-201ENST00000312438 MRPL54Q6P161 138 aaKnown RBP12.64□□□□□ -0.39
CLCF1-201ENST00000312438 DCANP1Q8TF63 244 aa12.64□□□□□ -0.39
CLCF1-201ENST00000312438 GTSF1Q8WW33 167 aa12.64□□□□□ -0.39
CLCF1-201ENST00000312438 LINC00477Q96M19 166 aa12.64□□□□□ -0.39
CLCF1-201ENST00000312438 PEMTQ9UBM1 199 aa12.64□□□□□ -0.39
CLCF1-201ENST00000312438 MYO9AB2RTY4 2548 aa12.64□□□□□ -0.39
CLCF1-201ENST00000312438 FABP5P3A8MUU1 101 aa12.63□□□□□ -0.39
CLCF1-201ENST00000312438 SNURFLB1AK76 121 aa12.63□□□□□ -0.39
CLCF1-201ENST00000312438 UBE2CO00762 179 aa12.63□□□□□ -0.39
CLCF1-201ENST00000312438 SH2D1AO60880 128 aa12.63□□□□□ -0.39
CLCF1-201ENST00000312438 NDUFA7O95182 113 aa12.63□□□□□ -0.39
CLCF1-201ENST00000312438 RBPMS2Q6ZRY4 209 aaKnown RBP12.63□□□□□ -0.39
CLCF1-201ENST00000312438 ATP5L2Q7Z4Y8 100 aa12.63□□□□□ -0.39
CLCF1-201ENST00000312438 OR10J6PQ8NGY7 276 aa12.63□□□□□ -0.39
CLCF1-201ENST00000312438 LENEPQ9Y5L5 61 aa12.63□□□□□ -0.39
CLCF1-201ENST00000312438 NOTCH2Q04721 2471 aa12.63□□□□□ -0.39
CLCF1-201ENST00000312438 XKRY2A2RUG3 117 aa12.62□□□□□ -0.39
CLCF1-201ENST00000312438 TMEM136Q6ZRR5 245 aa12.62□□□□□ -0.39
CLCF1-201ENST00000312438 MRPL18Q9H0U6 180 aaKnown RBP12.62□□□□□ -0.39
CLCF1-201ENST00000312438 MS4A6AQ9H2W1 248 aa12.62□□□□□ -0.39
CLCF1-201ENST00000312438 SELENOKQ9Y6D0 94 aa12.62□□□□□ -0.39
CLCF1-201ENST00000312438 TMEM189A5PLL7 270 aa12.62□□□□□ -0.39
CLCF1-201ENST00000312438 CD28P10747 220 aa12.62□□□□□ -0.39
CLCF1-201ENST00000312438 HOXA5P20719 270 aa12.62□□□□□ -0.39
CLCF1-201ENST00000312438 ZNF80P51504 273 aaPredicted RBP12.62□□□□□ -0.39
CLCF1-201ENST00000312438 WFDC3Q8IUB2 231 aa12.62□□□□□ -0.39
CLCF1-201ENST00000312438 AKAP9Q99996 3911 aa12.62□□□□□ -0.39
CLCF1-201ENST00000312438 INAFM1C9JVW0 142 aa12.61□□□□□ -0.39
CLCF1-201ENST00000312438 HLA-DQA1P01909 254 aa12.61□□□□□ -0.39
CLCF1-201ENST00000312438 RAB4BP61018 213 aa12.61□□□□□ -0.39
CLCF1-201ENST00000312438 SRSF2Q01130 221 aaKnown RBP12.61□□□□□ -0.39
CLCF1-201ENST00000312438 OR9G4Q8NGQ1 327 aa12.61□□□□□ -0.39
CLCF1-201ENST00000312438 PGLYRP4Q96LB8 373 aa12.61□□□□□ -0.39
CLCF1-201ENST00000312438 DUX3Q96PT4 197 aa12.61□□□□□ -0.39
CLCF1-201ENST00000312438 TSSC4Q9Y5U2 329 aaPredicted RBP12.61□□□□□ -0.39
CLCF1-201ENST00000312438 HIVEP2P31629 2446 aa12.61□□□□□ -0.39
CLCF1-201ENST00000312438 HAX1O00165 279 aa12.6□□□□□ -0.39
CLCF1-201ENST00000312438 GZMBP10144 247 aa12.6□□□□□ -0.39
CLCF1-201ENST00000312438 RPS20P60866 119 aaKnown RBP12.6□□□□□ -0.39
CLCF1-201ENST00000312438 Q6AWC8 147 aa12.6□□□□□ -0.39
CLCF1-201ENST00000312438 OR8A1Q8NGG7 326 aa12.6□□□□□ -0.39
CLCF1-201ENST00000312438 DLX4Q92988 240 aaPredicted RBP12.6□□□□□ -0.39
CLCF1-201ENST00000312438 ZNF705DP0CH99 300 aaPredicted RBP12.6□□□□□ -0.39
CLCF1-201ENST00000312438 ZNF705BP0CI00 300 aaPredicted RBP12.6□□□□□ -0.39
CLCF1-201ENST00000312438 PAFAH1B2P68402 229 aa12.6□□□□□ -0.39
CLCF1-201ENST00000312438 ADAMTSL5Q6ZMM2 481 aa12.6□□□□□ -0.39
CLCF1-201ENST00000312438 C11orf44Q8N8P7 122 aa12.6□□□□□ -0.39
CLCF1-201ENST00000312438 RNF114Q9Y508 228 aa12.6□□□□□ -0.39
CLCF1-201ENST00000312438 A0A1B0GXF2 115 aa12.59□□□□□ -0.39
CLCF1-201ENST00000312438 K7EQG2 157 aa12.59□□□□□ -0.39
CLCF1-201ENST00000312438 SNRPD3P62318 126 aaKnown RBP12.59□□□□□ -0.39
CLCF1-201ENST00000312438 CITED2Q99967 270 aaPredicted RBP12.59□□□□□ -0.39
CLCF1-201ENST00000312438 TCF21O43680 179 aa12.58□□□□□ -0.4
CLCF1-201ENST00000312438 HBBP68871 147 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms