RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 UQCRFS1P47985 274 aa11.73□□□□□ -0.53
SPIRE1-201ENST00000309836 C5orf56Q8N8D9 126 aa11.73□□□□□ -0.53
SPIRE1-201ENST00000309836 HIVEP3Q5T1R4 2406 aa11.73□□□□□ -0.53
SPIRE1-201ENST00000309836 HSBP1L1C9JCN9 74 aa11.72□□□□□ -0.53
SPIRE1-201ENST00000309836 NPYP01303 97 aa11.72□□□□□ -0.53
SPIRE1-201ENST00000309836 PAX8Q06710 450 aa11.72□□□□□ -0.53
SPIRE1-201ENST00000309836 TWIST1Q15672 202 aa11.72□□□□□ -0.53
SPIRE1-201ENST00000309836 SLC25A34Q6PIV7 304 aa11.72□□□□□ -0.53
SPIRE1-201ENST00000309836 MS4A6AQ9H2W1 248 aa11.72□□□□□ -0.53
SPIRE1-201ENST00000309836 MED13LQ71F56 2210 aa11.72□□□□□ -0.53
SPIRE1-201ENST00000309836 IGHV3OR16-13A0A075B7E8 117 aa11.72□□□□□ -0.53
SPIRE1-201ENST00000309836 IGHV3-74A0A0B4J1X5 117 aa11.72□□□□□ -0.53
SPIRE1-201ENST00000309836 TRAV8-2A0A0B4J237 113 aa11.72□□□□□ -0.53
SPIRE1-201ENST00000309836 ORM1P02763 201 aa11.72□□□□□ -0.53
SPIRE1-201ENST00000309836 RAB9AP51151 201 aa11.72□□□□□ -0.53
SPIRE1-201ENST00000309836 IL17RELQ6ZVW7 336 aa11.72□□□□□ -0.53
SPIRE1-201ENST00000309836 ORAOV1Q8WV07 137 aa11.72□□□□□ -0.53
SPIRE1-201ENST00000309836 EEF1AKMT3Q96AZ1 226 aa11.72□□□□□ -0.53
SPIRE1-201ENST00000309836 RNF185Q96GF1 192 aa11.72□□□□□ -0.53
SPIRE1-201ENST00000309836 MSRB1Q9NZV6 116 aa11.72□□□□□ -0.53
SPIRE1-201ENST00000309836 CSMD1Q96PZ7 3565 aa11.71□□□□□ -0.53
SPIRE1-201ENST00000309836 RBAKDNA6NC62 111 aa11.71□□□□□ -0.53
SPIRE1-201ENST00000309836 ZNF207O43670 478 aaKnown RBP11.71□□□□□ -0.53
SPIRE1-201ENST00000309836 TMEM219Q86XT9 240 aa11.71□□□□□ -0.53
SPIRE1-201ENST00000309836 IGHV3-49A0A0A0MS15 119 aa11.7□□□□□ -0.54
SPIRE1-201ENST00000309836 FABP5P3A8MUU1 101 aa11.7□□□□□ -0.54
SPIRE1-201ENST00000309836 IGHV4-39P01824 125 aa11.7□□□□□ -0.54
SPIRE1-201ENST00000309836 LINC01559Q495D7 138 aa11.7□□□□□ -0.54
SPIRE1-201ENST00000309836 C19orf54Q5BKX5 351 aa11.7□□□□□ -0.54
SPIRE1-201ENST00000309836 SLC50A1Q9BRV3 221 aa11.7□□□□□ -0.54
SPIRE1-201ENST00000309836 CNFNQ9BYD5 112 aa11.7□□□□□ -0.54
SPIRE1-201ENST00000309836 U3KQE9 123 aa11.7□□□□□ -0.54
SPIRE1-201ENST00000309836 SPTBN1Q01082 2364 aaKnown RBP11.7□□□□□ -0.54
SPIRE1-201ENST00000309836 IGHV3OR16-10A0A075B7F0 116 aa11.7□□□□□ -0.54
SPIRE1-201ENST00000309836 CKS2P33552 79 aa11.7□□□□□ -0.54
SPIRE1-201ENST00000309836 FXYD7P58549 80 aa11.7□□□□□ -0.54
SPIRE1-201ENST00000309836 MPV17L2Q567V2 206 aa11.7□□□□□ -0.54
SPIRE1-201ENST00000309836 OR8A1Q8NGG7 326 aa11.7□□□□□ -0.54
SPIRE1-201ENST00000309836 AGPAT4-IT1Q9H0P7 198 aa11.7□□□□□ -0.54
SPIRE1-201ENST00000309836 PRORYQ9H606 182 aa11.7□□□□□ -0.54
SPIRE1-201ENST00000309836 COX11Q9Y6N1 276 aa11.7□□□□□ -0.54
SPIRE1-201ENST00000309836 TRBV7-1A0A0A6YYK4 115 aa11.69□□□□□ -0.54
SPIRE1-201ENST00000309836 C11orf21Q9P2W6 132 aa11.69□□□□□ -0.54
SPIRE1-201ENST00000309836 GAS8-AS1O95177 125 aa11.68□□□□□ -0.54
SPIRE1-201ENST00000309836 GNLYP22749 145 aa11.68□□□□□ -0.54
SPIRE1-201ENST00000309836 ATP5G2Q06055 141 aa11.68□□□□□ -0.54
SPIRE1-201ENST00000309836 FOXE3Q13461 319 aa11.68□□□□□ -0.54
SPIRE1-201ENST00000309836 PIFOQ8TCI5 191 aa11.68□□□□□ -0.54
SPIRE1-201ENST00000309836 METTL26Q96S19 204 aa11.68□□□□□ -0.54
SPIRE1-201ENST00000309836 MOB4Q9Y3A3 225 aa11.68□□□□□ -0.54
SPIRE1-201ENST00000309836 HBDP02042 147 aa11.68□□□□□ -0.54
SPIRE1-201ENST00000309836 PPIFP30405 207 aaKnown RBP11.68□□□□□ -0.54
SPIRE1-201ENST00000309836 BVES-AS1Q5T3Y7 98 aa11.68□□□□□ -0.54
SPIRE1-201ENST00000309836 C8orf86Q6ZUL3 223 aa11.68□□□□□ -0.54
SPIRE1-201ENST00000309836 ABCA2Q9BZC7 2435 aa11.67□□□□□ -0.54
SPIRE1-201ENST00000309836 TRAV41A0A0B4J266 112 aa11.67□□□□□ -0.54
SPIRE1-201ENST00000309836 IGKV3D-20A0A0C4DH25 116 aa11.67□□□□□ -0.54
SPIRE1-201ENST00000309836 TCF21O43680 179 aa11.67□□□□□ -0.54
SPIRE1-201ENST00000309836 NUDT3O95989 172 aa11.67□□□□□ -0.54
SPIRE1-201ENST00000309836 PRSS57Q6UWY2 283 aa11.67□□□□□ -0.54
SPIRE1-201ENST00000309836 LINC00527Q9UJ94 153 aa11.67□□□□□ -0.54
SPIRE1-201ENST00000309836 ASH1LQ9NR48 2969 aaKnown RBP11.67□□□□□ -0.54
SPIRE1-201ENST00000309836 SPTBN4Q9H254 2564 aa11.66□□□□□ -0.54
SPIRE1-201ENST00000309836 ITPR1Q14643 2758 aa11.66□□□□□ -0.54
SPIRE1-201ENST00000309836 COX8AP10176 69 aa11.66□□□□□ -0.54
SPIRE1-201ENST00000309836 CRIP2P52943 208 aaPredicted RBP11.66□□□□□ -0.54
SPIRE1-201ENST00000309836 HIST1H1AQ02539 215 aaPredicted RBP11.66□□□□□ -0.54
SPIRE1-201ENST00000309836 LGALS9BQ3B8N2 356 aa11.66□□□□□ -0.54
SPIRE1-201ENST00000309836 LGALS9CQ6DKI2 356 aa11.66□□□□□ -0.54
SPIRE1-201ENST00000309836 MRPL53Q96EL3 112 aaKnown RBP11.66□□□□□ -0.54
SPIRE1-201ENST00000309836 IGHV1-69DA0A0B4J2H0 117 aa11.66□□□□□ -0.54
SPIRE1-201ENST00000309836 LINC01546A6NGU7 62 aa11.66□□□□□ -0.54
SPIRE1-201ENST00000309836 CCL25O15444 150 aa11.66□□□□□ -0.54
SPIRE1-201ENST00000309836 IGHV1-69P01742 117 aa11.66□□□□□ -0.54
SPIRE1-201ENST00000309836 ANKRD39Q53RE8 183 aa11.66□□□□□ -0.54
SPIRE1-201ENST00000309836 C2orf91Q6ZV80 131 aa11.66□□□□□ -0.54
SPIRE1-201ENST00000309836 ZNF738Q8NE65 137 aa11.66□□□□□ -0.54
SPIRE1-201ENST00000309836 SFTPCP11686 197 aa11.65□□□□□ -0.54
SPIRE1-201ENST00000309836 CACNG7P62955 275 aa11.65□□□□□ -0.54
SPIRE1-201ENST00000309836 BRD3OSQ6XYD6 125 aa11.65□□□□□ -0.54
SPIRE1-201ENST00000309836 IGHV4-61A0A0C4DH41 118 aa11.64□□□□□ -0.55
SPIRE1-201ENST00000309836 FAM223BA6NKX1 122 aa11.64□□□□□ -0.55
SPIRE1-201ENST00000309836 FGF6P10767 208 aa11.64□□□□□ -0.55
SPIRE1-201ENST00000309836 FOSL1P15407 271 aa11.64□□□□□ -0.55
SPIRE1-201ENST00000309836 Q6ZQT7 251 aa11.64□□□□□ -0.55
SPIRE1-201ENST00000309836 FAM223AQ8IWN6 122 aa11.64□□□□□ -0.55
SPIRE1-201ENST00000309836 GLMPQ8WWB7 406 aa11.64□□□□□ -0.55
SPIRE1-201ENST00000309836 MAP1LC3AQ9H492 121 aa11.64□□□□□ -0.55
SPIRE1-201ENST00000309836 TAX1BP3O14907 124 aa11.63□□□□□ -0.55
SPIRE1-201ENST00000309836 PPBPP02775 128 aa11.63□□□□□ -0.55
SPIRE1-201ENST00000309836 GATA1P15976 413 aaPredicted RBP11.63□□□□□ -0.55
SPIRE1-201ENST00000309836 TMEM78Q5T7P6 136 aa11.63□□□□□ -0.55
SPIRE1-201ENST00000309836 C9orf47Q6ZRZ4 202 aa11.63□□□□□ -0.55
SPIRE1-201ENST00000309836 DPF1Q92782 380 aa11.63□□□□□ -0.55
SPIRE1-201ENST00000309836 IFI27L1Q96BM0 104 aa11.63□□□□□ -0.55
SPIRE1-201ENST00000309836 C20orf173Q96LM9 149 aa11.63□□□□□ -0.55
SPIRE1-201ENST00000309836 ATP6V0BQ99437 205 aa11.63□□□□□ -0.55
SPIRE1-201ENST00000309836 NPFFR1Q9GZQ6 430 aa11.63□□□□□ -0.55
SPIRE1-201ENST00000309836 TRAV40A0A0B4J280 105 aa11.63□□□□□ -0.55
SPIRE1-201ENST00000309836 TNFRSF6BO95407 300 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms