RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 FXYD2P54710 66 aa8.77□□□□□ -1
PTPN7-201ENST00000309017 MSRB1Q9NZV6 116 aa8.77□□□□□ -1
PTPN7-201ENST00000309017 COL12A1Q99715 3063 aa8.77□□□□□ -1.01
PTPN7-201ENST00000309017 NCBP2LA6PVI3 153 aaKnown RBP8.77□□□□□ -1.01
PTPN7-201ENST00000309017 K7EIM0 57 aa8.77□□□□□ -1.01
PTPN7-201ENST00000309017 SMAGPQ0VAQ4 97 aa8.77□□□□□ -1.01
PTPN7-201ENST00000309017 ZNF493Q6ZR52 646 aa8.77□□□□□ -1.01
PTPN7-201ENST00000309017 C8orf31Q8N9H6 132 aa8.77□□□□□ -1.01
PTPN7-201ENST00000309017 CHAC1Q9BUX1 264 aa8.77□□□□□ -1.01
PTPN7-201ENST00000309017 PRO3102Q9H379 93 aa8.77□□□□□ -1.01
PTPN7-201ENST00000309017 TEX48A0A1B0GUV7 120 aa8.77□□□□□ -1.01
PTPN7-201ENST00000309017 K7EM74 188 aa8.77□□□□□ -1.01
PTPN7-201ENST00000309017 SIVA1O15304 175 aa8.77□□□□□ -1.01
PTPN7-201ENST00000309017 EGR2P11161 476 aaPredicted RBP8.77□□□□□ -1.01
PTPN7-201ENST00000309017 ADAMTSL5Q6ZMM2 481 aa8.77□□□□□ -1.01
PTPN7-201ENST00000309017 PIP4P2Q8N4L2 257 aa8.77□□□□□ -1.01
PTPN7-201ENST00000309017 UFC1Q9Y3C8 167 aa8.77□□□□□ -1.01
PTPN7-201ENST00000309017 J3QR89 54 aa8.76□□□□□ -1.01
PTPN7-201ENST00000309017 MFAP4P55083 255 aa8.76□□□□□ -1.01
PTPN7-201ENST00000309017 PLA2G2CQ5R387 149 aa8.76□□□□□ -1.01
PTPN7-201ENST00000309017 ZC2HC1BQ5TFG8 222 aa8.76□□□□□ -1.01
PTPN7-201ENST00000309017 TACC2O95359 2948 aa8.76□□□□□ -1.01
PTPN7-201ENST00000309017 IGKCP01834 107 aa8.76□□□□□ -1.01
PTPN7-201ENST00000309017 RPL7P18124 248 aaKnown RBP8.76□□□□□ -1.01
PTPN7-201ENST00000309017 C16orf54Q6UWD8 224 aa8.76□□□□□ -1.01
PTPN7-201ENST00000309017 MAP1AP78559 2803 aaPredicted RBP8.76□□□□□ -1.01
PTPN7-201ENST00000309017 TRBV6-1A0A0K0K1D8 114 aa8.76□□□□□ -1.01
PTPN7-201ENST00000309017 PRR25Q96S07 402 aa8.76□□□□□ -1.01
PTPN7-201ENST00000309017 RAB1BQ9H0U4 201 aa8.76□□□□□ -1.01
PTPN7-201ENST00000309017 ZNF207O43670 478 aaKnown RBP8.75□□□□□ -1.01
PTPN7-201ENST00000309017 HOXB4P17483 251 aaPredicted RBP8.75□□□□□ -1.01
PTPN7-201ENST00000309017 DLX6P56179 175 aa8.75□□□□□ -1.01
PTPN7-201ENST00000309017 SCGB2A2Q13296 93 aa8.75□□□□□ -1.01
PTPN7-201ENST00000309017 HLA-DMBP28068 263 aa8.75□□□□□ -1.01
PTPN7-201ENST00000309017 TMEM158Q8WZ71 300 aa8.75□□□□□ -1.01
PTPN7-201ENST00000309017 TNFRSF14Q92956 283 aa8.75□□□□□ -1.01
PTPN7-201ENST00000309017 IGKV2D-26A0A0A0MRZ7 120 aa8.75□□□□□ -1.01
PTPN7-201ENST00000309017 GATA1P15976 413 aaPredicted RBP8.75□□□□□ -1.01
PTPN7-201ENST00000309017 GFRALQ6UXV0 394 aa8.75□□□□□ -1.01
PTPN7-201ENST00000309017 MTURNQ8N3F0 131 aa8.75□□□□□ -1.01
PTPN7-201ENST00000309017 ABHD17AQ96GS6 310 aa8.75□□□□□ -1.01
PTPN7-201ENST00000309017 VGLL1Q99990 258 aa8.75□□□□□ -1.01
PTPN7-201ENST00000309017 SCGB2A1O75556 95 aa8.74□□□□□ -1.01
PTPN7-201ENST00000309017 CRYGBP07316 175 aa8.74□□□□□ -1.01
PTPN7-201ENST00000309017 FAM57AQ8TBR7 257 aa8.74□□□□□ -1.01
PTPN7-201ENST00000309017 MYOZ3Q8TDC0 251 aa8.74□□□□□ -1.01
PTPN7-201ENST00000309017 TLN2Q9Y4G6 2542 aa8.74□□□□□ -1.01
PTPN7-201ENST00000309017 NBR2O15453 112 aa8.74□□□□□ -1.01
PTPN7-201ENST00000309017 DPM2O94777 84 aa8.74□□□□□ -1.01
PTPN7-201ENST00000309017 TNFRSF6BO95407 300 aa8.74□□□□□ -1.01
PTPN7-201ENST00000309017 HIST1H4GQ99525 98 aa8.74□□□□□ -1.01
PTPN7-201ENST00000309017 VPS13CQ709C8 3753 aa8.74□□□□□ -1.01
PTPN7-201ENST00000309017 IGHV3OR16-13A0A075B7E8 117 aa8.74□□□□□ -1.01
PTPN7-201ENST00000309017 IGHV3-74A0A0B4J1X5 117 aa8.74□□□□□ -1.01
PTPN7-201ENST00000309017 A0A0G2JNJ9 132 aa8.74□□□□□ -1.01
PTPN7-201ENST00000309017 PDE6HQ13956 83 aa8.74□□□□□ -1.01
PTPN7-201ENST00000309017 NXT2Q9NPJ8 142 aaKnown RBP8.74□□□□□ -1.01
PTPN7-201ENST00000309017 C21orf62Q9NYP8 219 aa8.74□□□□□ -1.01
PTPN7-201ENST00000309017 Q9UFV3 132 aa8.74□□□□□ -1.01
PTPN7-201ENST00000309017 IGLV1-47P01700 117 aa8.73□□□□□ -1.01
PTPN7-201ENST00000309017 NEGR1Q7Z3B1 354 aa8.73□□□□□ -1.01
PTPN7-201ENST00000309017 GATD1Q8NB37 220 aa8.73□□□□□ -1.01
PTPN7-201ENST00000309017 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.73□□□□□ -1.013e-6■■□□□ 11.8
PTPN7-201ENST00000309017 TRAV40A0A0B4J280 105 aa8.73□□□□□ -1.01
PTPN7-201ENST00000309017 TMEM8BA6NDV4 472 aa8.73□□□□□ -1.01
PTPN7-201ENST00000309017 ZNF80P51504 273 aaPredicted RBP8.73□□□□□ -1.01
PTPN7-201ENST00000309017 ZNF479Q96JC4 524 aa8.73□□□□□ -1.01
PTPN7-201ENST00000309017 KLK15Q9H2R5 256 aa8.73□□□□□ -1.01
PTPN7-201ENST00000309017 U3KQK5 164 aa8.73□□□□□ -1.01
PTPN7-201ENST00000309017 ARHGAP32A7KAX9 2087 aa8.73□□□□□ -1.01
PTPN7-201ENST00000309017 SETD2Q9BYW2 2564 aaPredicted RBP8.73□□□□□ -1.01
PTPN7-201ENST00000309017 TRBV25-1A0A075B6N4 114 aa8.73□□□□□ -1.01
PTPN7-201ENST00000309017 IGHV3-66A0A0C4DH42 116 aa8.73□□□□□ -1.01
PTPN7-201ENST00000309017 FABP5P3A8MUU1 101 aa8.73□□□□□ -1.01
PTPN7-201ENST00000309017 NDUFA3O95167 84 aa8.73□□□□□ -1.01
PTPN7-201ENST00000309017 GAS8-AS1O95177 125 aa8.73□□□□□ -1.01
PTPN7-201ENST00000309017 ERCC8Q13216 396 aa8.73□□□□□ -1.01
PTPN7-201ENST00000309017 ADGRG4Q8IZF6 3080 aa8.73□□□□□ -1.01
PTPN7-201ENST00000309017 SIGMAR1Q99720 223 aa8.73□□□□□ -1.01
PTPN7-201ENST00000309017 OVOL3O00110 214 aa8.72□□□□□ -1.01
PTPN7-201ENST00000309017 CIDEAO60543 219 aa8.72□□□□□ -1.01
PTPN7-201ENST00000309017 TSSC4Q9Y5U2 329 aaPredicted RBP8.72□□□□□ -1.01
PTPN7-201ENST00000309017 AZU1P20160 251 aa8.72□□□□□ -1.01
PTPN7-201ENST00000309017 ODF1Q14990 250 aa8.72□□□□□ -1.01
PTPN7-201ENST00000309017 KAAG1Q9UBP8 84 aa8.72□□□□□ -1.01
PTPN7-201ENST00000309017 JMJD1CQ15652 2540 aa8.72□□□□□ -1.01
PTPN7-201ENST00000309017 SMIM17P0DL12 118 aa8.72□□□□□ -1.01
PTPN7-201ENST00000309017 AMTNQ6UX39 209 aa8.72□□□□□ -1.01
PTPN7-201ENST00000309017 HIF1ANQ9NWT6 349 aa8.72□□□□□ -1.01
PTPN7-201ENST00000309017 ETDBQ3ZM63 59 aa8.71□□□□□ -1.01
PTPN7-201ENST00000309017 TTC9CQ8N5M4 171 aa8.71□□□□□ -1.01
PTPN7-201ENST00000309017 DCHS2Q6V1P9 2916 aa8.71□□□□□ -1.01
PTPN7-201ENST00000309017 E7EQL1 145 aa8.71□□□□□ -1.02
PTPN7-201ENST00000309017 CEACAM4O75871 244 aa8.71□□□□□ -1.02
PTPN7-201ENST00000309017 ATP5LO75964 103 aa8.71□□□□□ -1.02
PTPN7-201ENST00000309017 THBDP07204 575 aa8.71□□□□□ -1.02
PTPN7-201ENST00000309017 MRPL35Q9NZE8 188 aaKnown RBP8.71□□□□□ -1.02
PTPN7-201ENST00000309017 DPM3Q9P2X0 92 aa8.71□□□□□ -1.02
PTPN7-201ENST00000309017 LRRK2Q5S007 2527 aa8.71□□□□□ -1.02
PTPN7-201ENST00000309017 H3BMG7 143 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 184.5 ms